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Montesol18-Sp2_coassembly_scaffold_584744

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_584744_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..984)
-----------------
DNA (984bp)
protein (328aa)
molecular chaperone DnaK n=1 Tax=Elioraea tepidiphila RepID=UPI00037C9196
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
dnaK; molecular chaperone DnaK
Montesol18-Sp2_coassembly_scaffold_584744_2
unknown

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1396..1815
-----------------
DNA (420bp)
protein (140aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_584744_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1885..2478)
-----------------
DNA (594bp)
protein (198aa)
Protein GrpE n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYI4_AZOS1
grpE; molecular chaperone
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Montesol18-Sp2_coassembly_scaffold_584744_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2522..3616)
-----------------
DNA (1095bp)
protein (365aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Oceanibaculum indicum P24 RepID=K2KLR9_9PROT
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hrcA; heat-inducible transcription repressor
Montesol18-Sp2_coassembly_scaffold_584744_5
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3777..4493
-----------------
DNA (717bp)
protein (239aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SBY5_PHAFV
Montesol18-Sp2_coassembly_scaffold_584744_6
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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4501..5103
-----------------
DNA (603bp)
protein (201aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TUT3_PHAFV
putative deoxyribonucleotide triphosphate pyrophosphatase
Montesol18-Sp2_coassembly_scaffold_584744_7
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5116..5376)
-----------------
DNA (261bp)
protein (87aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI0003733A0C
Scaffold1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34118.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_584744_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5470..5937
-----------------
DNA (468bp)
protein (156aa)
AsnC family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2K222_9PROT
AsnC family transcriptional regulator {ECO:0000313|EMBL:EKE76914.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
bkdR; Bkd operon transcriptional regulator
Montesol18-Sp2_coassembly_scaffold_584744_9
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5959..6642
-----------------
DNA (684bp)
protein (228aa)
Putative oxygen-independent coproporphyrinogen III oxidase (HemN-like) {ECO:0000313|EMBL:CBS88185.1}; EC=1.3.99.22 {ECO:0000313|EMBL:CBS88185.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Putative oxygen-independent coproporphyrinogen III oxidase (HemN-like) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6Y1_AZOL4
putative oxygen-independent coproporphyrinogen III oxidase (HemN-like)
Montesol18-Sp2_coassembly_scaffold_584744_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6582..6902)
-----------------
DNA (321bp)
protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:CEG10031.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
Montesol18-Sp2_coassembly_scaffold_584744_11
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7135..7626)
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036582C1
ABC-type branched-chain amino acid binding protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_584744_12
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8101..9264
-----------------
DNA (1164bp)
protein (388aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IVS8_RHOCS
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_584744_13
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9261..9635
-----------------
DNA (375bp)
protein (125aa)
UPF0102 protein amb4503 n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Y4503_MAGSA
hypothetical protein
UPF0102 protein CCC_00972 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
Montesol18-Sp2_coassembly_scaffold_584744_14
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9677..10318
-----------------
DNA (642bp)
protein (214aa)
Periplasmic or secreted lipoprotein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TW20_9PROT
Periplasmic or secreted lipoprotein {ECO:0000313|EMBL:CAM74827.1}; TaxID=55518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
conserved protein of Transport-associated and nodulation domain
Montesol18-Sp2_coassembly_scaffold_584744_15
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10443..11408
-----------------
DNA (966bp)
protein (322aa)
gshB; glutathione synthetase (EC:6.3.2.3)
Glutathione synthetase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KLR5_9PROT
Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
Montesol18-Sp2_coassembly_scaffold_584744_16
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11416..12096)
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W0A1_MAGSA
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAE52724.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
Montesol18-Sp2_coassembly_scaffold_584744_17
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12274..12924)
-----------------
DNA (651bp)
protein (217aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P108_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI74337.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Displaying 17 items

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