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Montesol18-Sp2_coassembly_scaffold_628579

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_628579_1
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..207)
-----------------
DNA (207bp)
protein (69aa)
Periplasmic protein TonB, links inner and outer membranes n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2A9_MAGSA
Putative TolA protein {ECO:0000313|EMBL:KIL97004.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
periplasmic protein TonB, links inner and outer membranes
Montesol18-Sp2_coassembly_scaffold_628579_2
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(227..703)
-----------------
DNA (477bp)
protein (159aa)
Biopolymer transport protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2IWQ2_9PROT
Biopolymer transport protein {ECO:0000313|EMBL:EKE67318.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
biopolymer transport TolR
Montesol18-Sp2_coassembly_scaffold_628579_3
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(709..1446)
-----------------
DNA (738bp)
protein (246aa)
Biopolymer transport protein n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9THW1_PHAFV
Biopolymer transport protein {ECO:0000313|EMBL:EPY01866.1}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
tolQ; TolQ protein
Montesol18-Sp2_coassembly_scaffold_628579_4
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1430..1939)
-----------------
DNA (510bp)
protein (170aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000377C903
acyl-CoA thioester hydrolase
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
Montesol18-Sp2_coassembly_scaffold_628579_5
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1932..2663)
-----------------
DNA (732bp)
protein (244aa)
ruvB; ATP-dependent DNA helicase, component of RuvABC resolvasome (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
Holliday junction DNA helicase RuvB n=1 Tax=Elioraea tepidiphila RepID=UPI0003777AA4
Montesol18-Sp2_coassembly_scaffold_628579_6
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2626..2847)
-----------------
DNA (222bp)
protein (74aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=alpha proteobacterium BAL199 RepID=A8TXE6_9PROT
ruvB; Holliday junction ATP-dependent DNA helicase RuvB
Montesol18-Sp2_coassembly_scaffold_628579_7
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2844..3449)
-----------------
DNA (606bp)
protein (202aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000255|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00031};; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RUVA_RHOCS
ruvA; Holliday junction DNA helicase RuvA
Montesol18-Sp2_coassembly_scaffold_628579_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3446..3961)
-----------------
DNA (516bp)
protein (172aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Oceanibaculum indicum P24 RepID=K2IWQ0_9PROT
crossover junction endodeoxyribonuclease RuvC
Montesol18-Sp2_coassembly_scaffold_628579_9
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3964..4323)
-----------------
DNA (360bp)
protein (120aa)
Probable transcriptional regulatory protein yebC n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RRA9_9PROT
Probable transcriptional regulatory protein yebC {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
Putative cytosolic protein
Montesol18-Sp2_coassembly_scaffold_628579_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4776..5588)
-----------------
DNA (813bp)
protein (271aa)
Metallophosphoesterase n=1 Tax=Oceanibaculum indicum P24 RepID=K2KJ97_9PROT
Metallophosphoesterase {ECO:0000313|EMBL:EKE77385.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_628579_11
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5596..6213)
-----------------
DNA (618bp)
protein (206aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HUZ2_PARL1
5-formyltetrahydrofolate cyclo-ligase
Montesol18-Sp2_coassembly_scaffold_628579_12
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6473..6994)
-----------------
DNA (522bp)
protein (174aa)
Uncharacterized protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2KVH0_9PROT
Conserved protein of unknown function
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
Montesol18-Sp2_coassembly_scaffold_628579_13
unknown

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comp(7003..7290)
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_628579_14
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7527..9566
-----------------
DNA (2040bp)
protein (680aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Transketolase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J2Y7_9PROT
cbbT; transketolase
Montesol18-Sp2_coassembly_scaffold_628579_15
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9624..10688
-----------------
DNA (1065bp)
protein (355aa)
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:ABC21400.1}; EC=4.1.2.13 {ECO:0000313|EMBL:ABC21400.1};; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
Fructose-1,6-bisphosphate aldolase n=2 Tax=Rhodospirillum rubrum RepID=G2TA63_RHORU
fructose-1,6-bisphosphate aldolase
Montesol18-Sp2_coassembly_scaffold_628579_16
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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10914..12266
-----------------
DNA (1353bp)
protein (451aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035D435B
extracellular solute-binding protein, family 1
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Montesol18-Sp2_coassembly_scaffold_628579_17
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12329..13000
-----------------
DNA (672bp)
protein (224aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036B9382
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:KFC63454.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative transmembrane component of ABC transporter
Displaying 17 items

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