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Montesol18-Sp2_coassembly_scaffold_681237

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_681237_1
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..496
-----------------
DNA (495bp)
protein (165aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI000360735C
Copper-binding protein {ECO:0000313|EMBL:KAI96394.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
electron transporter SCO1/SenC
Montesol18-Sp2_coassembly_scaffold_681237_2
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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514..903
-----------------
DNA (390bp)
protein (130aa)
Cytochrome c n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BQU4_GRABC
Cytochrome c
Cytochrome c {ECO:0000313|EMBL:AHJ63793.1}; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
Montesol18-Sp2_coassembly_scaffold_681237_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(922..2715)
-----------------
DNA (1794bp)
protein (598aa)
Putative long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
AMP-dependent synthetase and ligase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J2Y9_9PROT
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EKE69192.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Montesol18-Sp2_coassembly_scaffold_681237_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2840..4696
-----------------
DNA (1857bp)
protein (619aa)
Putative oligoendopeptidase F {ECO:0000313|EMBL:CBS87443.1}; EC=3.4.24.- {ECO:0000313|EMBL:CBS87443.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Putative oligoendopeptidase F n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z925_AZOL4
putative oligoendopeptidase F
Montesol18-Sp2_coassembly_scaffold_681237_5
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4696..6060
-----------------
DNA (1365bp)
protein (455aa)
Ubiquinone biosynthesis monooxygenase UbiB n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H1W2_9PROT
Ubiquinone biosynthesis monooxygenase UbiB {ECO:0000313|EMBL:EKV31547.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
aarF domain-containing kinase
Montesol18-Sp2_coassembly_scaffold_681237_6
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6244..7359
-----------------
DNA (1116bp)
protein (372aa)
C-5 cytosine-specific DNA methylase n=1 Tax=Pseudomonas aeruginosa PA21_ST175 RepID=M3ASE0_PSEAI
Cytosine methyltransferase {ECO:0000313|EMBL:KJS14397.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
C-5 cytosine-specific DNA methylase
Montesol18-Sp2_coassembly_scaffold_681237_7
Burkholderia phage AH2, Caudovirales, Viruses

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7346..8008
-----------------
DNA (663bp)
protein (221aa)
Excinuclease n=1 Tax=Burkholderia phage AH2 RepID=I6NP88_9CAUD
Excinuclease {ECO:0000313|EMBL:AEY69543.1}; TaxID=1133022 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Burkholderia phage AH2.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_681237_8
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8449..10641)
-----------------
DNA (2193bp)
protein (731aa)
Uncharacterized protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GWT2_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA90287.1}; Flags: Precursor;; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
Montesol18-Sp2_coassembly_scaffold_681237_9
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10853..12031
-----------------
DNA (1179bp)
protein (393aa)
pntAA; NAD(P) transhydrogenase subunit alpha part 1 (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Oceanibaculum indicum P24 RepID=K2JTV2_9PROT
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:KJB96295.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Montesol18-Sp2_coassembly_scaffold_681237_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12035..12448
-----------------
DNA (414bp)
protein (138aa)
pntAB; NAD(P) transhydrogenase subunit alpha part 2 (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha part 2 n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B418B0
NAD(P) transhydrogenase subunit alpha part 2 {ECO:0000313|EMBL:EKE73818.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Montesol18-Sp2_coassembly_scaffold_681237_11
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12468..13871
-----------------
DNA (1404bp)
protein (468aa)
pntB; NAD(P) transhydrogenase subunit beta (EC:1.6.1.2)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
NAD(P) transhydrogenase subunit beta n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NU96_AZOS1
Montesol18-Sp2_coassembly_scaffold_681237_12
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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14050..15210
-----------------
DNA (1161bp)
protein (387aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EUT1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV07765.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_681237_13
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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15418..15744
-----------------
DNA (327bp)
protein (109aa)
Uncharacterized protein n=2 Tax=Enterococcus faecium RepID=L2J7C4_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ELA76172.1}; TaxID=1138891 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0011.;"
ATPase
Montesol18-Sp2_coassembly_scaffold_681237_14
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15748..16614)
-----------------
DNA (867bp)
protein (289aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IHY4_METNO
Montesol18-Sp2_coassembly_scaffold_681237_15
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16744..16947)
-----------------
DNA (204bp)
protein (68aa)
30S ribosomal protein S21 n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2LS24_9PROT
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
Montesol18-Sp2_coassembly_scaffold_681237_16
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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17138..17689
-----------------
DNA (552bp)
protein (184aa)
def; Peptide deformylase(Polypeptide deformylase) (EC:3.5.1.88 3.5.1.31)
Peptide deformylase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GKC6_9PROT
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
Montesol18-Sp2_coassembly_scaffold_681237_17
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17673..18356
-----------------
DNA (684bp)
protein (228aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2IJI9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE70306.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
rpsU-divergently transcribed protein
Montesol18-Sp2_coassembly_scaffold_681237_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18353..18922)
-----------------
DNA (570bp)
protein (190aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JKX1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE75087.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
membrane protein
Montesol18-Sp2_coassembly_scaffold_681237_19
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18948..19175)
-----------------
DNA (228bp)
protein (76aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
Phosphoribosylaminoimidazole carboxylase ATPase subunit n=1 Tax=Oceanibaculum indicum P24 RepID=K2JBF5_9PROT
phosphoribosylaminoimidazole carboxylase ATPase subunit
Displaying 19 items

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