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Montesol18-Sp2_coassembly_scaffold_1039140

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_1039140_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..313)
-----------------
DNA (312bp)
protein (104aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:ABS64590.1}; EC=4.4.1.8 {ECO:0000313|EMBL:ABS64590.1};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Cystathionine beta-lyase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXF7_PARL1
cystathionine beta-lyase
Montesol18-Sp2_coassembly_scaffold_1039140_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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552..1601
-----------------
DNA (1050bp)
protein (350aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036932B6
bztA; general L-amino acid transport system substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Montesol18-Sp2_coassembly_scaffold_1039140_3
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1719..2918
-----------------
DNA (1200bp)
protein (400aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003637D30
ABC transporter permease {ECO:0000313|EMBL:KJB97077.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
aapQ; L-amino acid ABC transporter permease
Montesol18-Sp2_coassembly_scaffold_1039140_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2923..4038
-----------------
DNA (1116bp)
protein (372aa)
amino acid ABC transporter permease n=1 Tax=Elioraea tepidiphila RepID=UPI000365AB2D
Putative general L-amino acid transport system permease protein AapM {ECO:0000313|EMBL:EHM01993.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
amino acid ABC transporter permease
Montesol18-Sp2_coassembly_scaffold_1039140_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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4071..4841
-----------------
DNA (771bp)
protein (257aa)
arginine ABC transporter ATP-binding protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003718E08
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM33717.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
aapP; general L-amino acid transport ATP-binding protein AapP
Montesol18-Sp2_coassembly_scaffold_1039140_6
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4860..5849)
-----------------
DNA (990bp)
protein (330aa)
Putative acetyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TKQ7_9PROT
Putative acetyltransferase {ECO:0000313|EMBL:EDP66264.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
acetyltransferase, GNAT family protein
Montesol18-Sp2_coassembly_scaffold_1039140_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(5846..6700)
-----------------
DNA (855bp)
protein (285aa)
sseA; 3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
Sulfurtransferase id=2213480 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Caulobacter taxon_order=Caulobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
Montesol18-Sp2_coassembly_scaffold_1039140_8
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6724..7764)
-----------------
DNA (1041bp)
protein (347aa)
cysteine synthase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E19A66
cysteine synthase
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_1039140_9
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7801..8415)
-----------------
DNA (615bp)
protein (205aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMI8_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI98567.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Montesol18-Sp2_coassembly_scaffold_1039140_10
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8595..9071
-----------------
DNA (477bp)
protein (159aa)
OsmC family protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRV9_HALO1
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:ACY19101.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
Montesol18-Sp2_coassembly_scaffold_1039140_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9159..9608)
-----------------
DNA (450bp)
protein (150aa)
cyanate lyase (EC:4.2.1.104); K01725 cyanate lyase [EC:4.2.1.104] id=5081659 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
cynS; Cyanate lyase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Montesol18-Sp2_coassembly_scaffold_1039140_12
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9624..10565)
-----------------
DNA (942bp)
protein (314aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035C7669
nrtC; nitrate transport system ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
Montesol18-Sp2_coassembly_scaffold_1039140_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10576..11421)
-----------------
DNA (846bp)
protein (282aa)
Putative nitrate transport system permease protein n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RBG8_9RHOO
nitrate ABC transporter permease
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Montesol18-Sp2_coassembly_scaffold_1039140_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11428..12807)
-----------------
DNA (1380bp)
protein (460aa)
ABC transporter nitrate-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K5J5_9PROT
ABC transporter nitrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Montesol18-Sp2_coassembly_scaffold_1039140_15
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13121..13615
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK34239.1}; Flags: Precursor;; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
Montesol18-Sp2_coassembly_scaffold_1039140_16
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13713..14777)
-----------------
DNA (1065bp)
protein (355aa)
OmpA family protein (Probable proton motor, MotY) n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IS40_RHOCS
ompA; OmpA family protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_1039140_17
unknown

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comp(15068..15847)
-----------------
DNA (780bp)
protein (260aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_1039140_18
unknown

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comp(15971..16294)
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

Montesol18-Sp2_coassembly_scaffold_1039140_19
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16384..16722)
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2JT69_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE77682.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_1039140_20
Aphanizomenon flos-aquae, Aphanizomenon, Nostocales, Cyanobacteria, Bacteria

Not on your lists

16831..17160
-----------------
DNA (330bp)
protein (110aa)
Divalent cation tolerance protein, CutA1 family n=2 Tax=Leptospira alstoni RepID=M6CH04_9LEPT
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:KHG40829.1}; TaxID=1532906 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Aphanizomenon.;" source="Aphanizomenon flos-aquae 2012/KM1/D3.;"
divalent ion tolerance protein CutA1
Montesol18-Sp2_coassembly_scaffold_1039140_21
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17274..18494
-----------------
DNA (1221bp)
protein (407aa)
Putative permease of the major facilitator superfamily MFS-1 n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z7Z1_AZOL4
MFS transporter {ECO:0000313|EMBL:KJB93818.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative permease of the major facilitator superfamily MFS-1
Montesol18-Sp2_coassembly_scaffold_1039140_22
Jannaschia aquimarina, Jannaschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18517..18915
-----------------
DNA (399bp)
protein (133aa)
virulence protein n=1 Tax=Xanthomonas axonopodis RepID=UPI0002FBBD2A
Jannaschia aquimarina strain GSW-M26 jaqu_contig000060, whole genome shotgun sequence {ECO:0000313|EMBL:KIT15049.1}; TaxID=935700 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Jannaschia.;" source="Jannaschia aquimarina.;"
glyoxalase/bleomycin resistance protein/dioxygenase family protein
Montesol18-Sp2_coassembly_scaffold_1039140_23
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18939..20285)
-----------------
DNA (1347bp)
protein (449aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.49)
O-acetylhomoserine sulfhydrylase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GVS9_9PROT
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_1039140_24
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20501..21220
-----------------
DNA (720bp)
protein (240aa)
Transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NVH3_AZOS1
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:BAI72402.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
Montesol18-Sp2_coassembly_scaffold_1039140_25
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21217..22383
-----------------
DNA (1167bp)
protein (389aa)
Multidrug efflux system, subunit A (AcrB family) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5X6_AZOL4
multidrug transporter
Multidrug transporter {ECO:0000313|EMBL:AIB13684.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Montesol18-Sp2_coassembly_scaffold_1039140_26
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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22380..22562
-----------------
DNA (183bp)
protein (61aa)
Acriflavin resistance protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PS41_9RHOO
Multidrug transporter MdtB {ECO:0000313|EMBL:KFB75004.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
acrB; acriflavin resistance protein
Displaying 26 items

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