ggKbase home page

Montesol18-Sp2_coassembly_scaffold_984110

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
Montesol18-Sp2_coassembly_scaffold_984110_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..405
-----------------
DNA (405bp)
protein (135aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000255|HAMAP-Rule:MF_00658}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RLMH_PARL1
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_984110_2
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(428..1099)
-----------------
DNA (672bp)
protein (224aa)
SirA family protein n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A5P7_ALKEH
SirA family protein
SirA family protein {ECO:0000313|EMBL:ABI57840.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
Montesol18-Sp2_coassembly_scaffold_984110_3
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1167..1391)
-----------------
DNA (225bp)
protein (75aa)
Exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCQ73280.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
Montesol18-Sp2_coassembly_scaffold_984110_4
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1346..2377)
-----------------
DNA (1032bp)
protein (344aa)
Membrane protein involved in aromatic hydrocarbon degradation n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QKW4_METS6
Exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCQ73280.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
Montesol18-Sp2_coassembly_scaffold_984110_5
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2475..2963)
-----------------
DNA (489bp)
protein (163aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TYI0_9PROT
NADH dehydrogenase {ECO:0000313|EMBL:KJS34476.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_984110_6
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3352..4968
-----------------
DNA (1617bp)
protein (539aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H5N1_9PROT
Montesol18-Sp2_coassembly_scaffold_984110_7
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4979..6193
-----------------
DNA (1215bp)
protein (405aa)
Peptidase M23B n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SL25_RHOPH
Peptidase M23B
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
Montesol18-Sp2_coassembly_scaffold_984110_8
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6190..7479
-----------------
DNA (1290bp)
protein (430aa)
C-terminal processing peptidase S41A n=1 Tax=alpha proteobacterium BAL199 RepID=A8TIQ6_9PROT
C-terminal processing peptidase S41A {ECO:0000313|EMBL:EDP66543.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
ctpA; carboxy-terminal-processing peptidase S41A
Montesol18-Sp2_coassembly_scaffold_984110_9
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7551..8660
-----------------
DNA (1110bp)
protein (370aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AIS9_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIB10836.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Montesol18-Sp2_coassembly_scaffold_984110_10
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8667..9200
-----------------
DNA (534bp)
protein (178aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
RNA pyrophosphohydrolase n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWU4_RHOCS
nudix family hydrolase, putative
Montesol18-Sp2_coassembly_scaffold_984110_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9197..10012)
-----------------
DNA (816bp)
protein (272aa)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J8L8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE71568.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
Montesol18-Sp2_coassembly_scaffold_984110_12
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10145..10552)
-----------------
DNA (408bp)
protein (136aa)
ATP synthase epsilon chain n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5R0_AZOL4
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
atpC; F-type H+-transporting ATPase subunit epsilon
Montesol18-Sp2_coassembly_scaffold_984110_13
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10575..10877)
-----------------
DNA (303bp)
protein (101aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14 3.6.3.15)
ATP synthase subunit beta n=1 Tax=Azospirillum amazonense Y2 RepID=G1XVV4_9PROT
Displaying 13 items

View Taxonomy