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AMDSBAU_5

Alias: SULFO_OTHER_5

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Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBAU_5_1
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(94..1233)
DNA (1140bp) protein (380aa)
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP66718.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
sulfurtransferase DndC
Sulfurtransferase DndC n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AEG1_THECD (db=UNIREF evalue=3.7e-121 bit_score=440.7 identity=54.5 coverage=98.42105263157895)
seg (db=Seg db_id=seg from=350 to=363)
AMDSBAU_5_2
unknown

Not on your lists

comp(1303..1947)
DNA (645bp) protein (215aa)
1303..1947 - ( gc_cont=0.553)
AMDSBAU_5_3
unknown

Not on your lists

comp(2036..2251)
DNA (216bp) protein (72aa)
2036..2251 - ( gc_cont=0.556)
AMDSBAU_5_4
unknown

Not on your lists

comp(2223..2603)
DNA (381bp) protein (127aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=65 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=3 to=25)
seg (db=Seg db_id=seg from=50 to=62)
seg (db=Seg db_id=seg from=14 to=20)
AMDSBAU_5_5
unknown

Not on your lists

comp(2701..3114)
DNA (414bp) protein (138aa)
seg (db=Seg db_id=seg from=97 to=108)
AMDSBAU_5_6
unknown

Not on your lists

comp(3181..3612)
DNA (432bp) protein (144aa)
3181..3612 - ( gc_cont=0.530)
AMDSBAU_5_7
unknown

Not on your lists

comp(3713..3928)
DNA (216bp) protein (72aa)
3713..3928 - ( gc_cont=0.519)
AMDSBAU_5_8
unknown

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3950..4270
DNA (321bp) protein (107aa)
3950..4270 + ( gc_cont=0.511)
AMDSBAU_5_9
unknown

Not on your lists

comp(4202..5017)
DNA (816bp) protein (272aa)
4202..5017 - ( gc_cont=0.548)
AMDSBAU_5_10
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5039..6508)
DNA (1470bp) protein (490aa)
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:ETT61239.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8
C-5 cytosine-specific DNA methylase n=1 Tax=Bacillus cereus AH1134 RepID=B5UW60_BACCE
C-5 cytosine-specific DNA methylase n=1 Tax=Bacillus cereus AH1134 RepID=B5UW60_BACCE (db=UNIREF evalue=1.5e-119 bit_score=435.6 identity=47.4 coverage=97.75510204081633)
scrFIA; DNA (cytosine-5-)-methyltransferase (EC:2.1.1.37) rbh
AMDSBAU_5_11
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6578..7603)
DNA (1026bp) protein (342aa)
Uncharacterized protein {ECO:0000313|EMBL:CDQ10680.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acid
hypothetical protein
Uncharacterized protein n=1 Tax=Lysinibacillus sphaericus (strain C3-41) RepID=B1I098_LYSSC
(db=HMMPfam db_id=PF01507 from=125 to=248 evalue=1.9e-05 interpro_id=IPR002500 interpro_description=Phosphoadenosine phosphosulphate reductase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
AMDSBAU_5_12
unknown

Not on your lists

comp(7707..7949)
DNA (243bp) protein (81aa)
7707..7949 - ( gc_cont=0.506)
AMDSBAU_5_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8215..9021)
DNA (807bp) protein (269aa)
DNA adenine methylase Dam
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridia
DNA adenine methylase n=2 Tax=Sulfobacillus acidophilus RepID=F8I2D8_SULAT (db=UNIREF evalue=2.3e-85 bit_score=321.2 identity=56.9 coverage=98.88475836431226)
seg (db=Seg db_id=seg from=47 to=60)
AMDSBAU_5_14
unknown

Not on your lists

9123..9332
DNA (210bp) protein (70aa)
9123..9332 + ( gc_cont=0.514)
AMDSBAU_5_15
unknown

Not on your lists

9325..9675
DNA (351bp) protein (117aa)
seg (db=Seg db_id=seg from=80 to=99)
AMDSBAU_5_16
unknown

Not on your lists

comp(9672..10100)
DNA (429bp) protein (143aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=124 to=141)
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=119)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
seg (db=Seg db_id=seg from=117 to=135)
AMDSBAU_5_17
unknown

Not on your lists

comp(10354..10593)
DNA (240bp) protein (80aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
AMDSBAU_5_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10565..10951)
DNA (387bp) protein (129aa)
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=679936 species="Bacteria; Firmicutes; Clostrid
Single-stranded DNA-binding protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUY0_SULAD (db=UNIREF evalue=5.6e-45 bit_score=186.0 identity=69.9 coverage=98.44961240310077)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=128 evalue=1.2e-46 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
AMDSBAU_5_19
unknown

Not on your lists

comp(10978..11952)
DNA (975bp) protein (325aa)
coiled-coil (db=Coil db_id=coil from=275 to=296 evalue=NA)
AMDSBAU_5_20
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11936..13405)
DNA (1470bp) protein (490aa)
von Willebrand factor type A {ECO:0000313|EMBL:EED07510.1}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocald
von Willebrand factor type A n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQJ9_9BACL (db=UNIREF evalue=3.3e-45 bit_score=188.7 identity=30.7 coverage=93.6734693877551)
von Willebrand factor type A domain-containing protein
coiled-coil (db=Coil db_id=coil from=173 to=194 evalue=NA)
AMDSBAU_5_21
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13402..14571)
DNA (1170bp) protein (390aa)
MoxR-like ATPase {ECO:0000313|EMBL:EQB28697.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
ATPase
ATPase associated with various cellular activities AAA_5 n=1 Tax=Anaeromyxobacter dehalogenans 2CP-1 RepID=B8JFA8_ANAD2 (db=UNIREF evalue=1.9e-64 bit_score=252.3 identity=40.2 coverage=93.84615384615384)
coiled-coil (db=Coil db_id=coil from=311 to=332 evalue=NA)
AMDSBAU_5_22
unknown

Not on your lists

comp(14624..15094)
DNA (471bp) protein (157aa)
seg (db=Seg db_id=seg from=17 to=36)
seg (db=Seg db_id=seg from=49 to=60)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
AMDSBAU_5_23
unknown

Not on your lists

comp(15401..15655)
DNA (255bp) protein (85aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=66 to=82)
seg (db=Seg db_id=seg from=2 to=25)
AMDSBAU_5_24
unknown

Not on your lists

comp(15794..16300)
DNA (507bp) protein (169aa)
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=20 to=70 evalue=5.2e-07 interpro_id=IPR009061 interpro_description=DNA binding domain, putative GO=Molecular Function: nucleotide binding (GO:0000166))
AMDSBAU_5_25
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16252..17811)
DNA (1560bp) protein (520aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF87159.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
AAA ATPase
AAA ATPase
AAA ATPase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UPT7_MYXSD
AMDSBAU_5_26
unknown

Not on your lists

17976..18152
DNA (177bp) protein (59aa)
17976..18152 + ( gc_cont=0.480)
AMDSBAU_5_27
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18149..19660)
DNA (1512bp) protein (504aa)
Uncharacterized protein {ECO:0000313|EMBL:CEO87656.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophacetic
Uncharacterized protein n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HBD4_9BACL (db=UNIREF evalue=1.2e-39 bit_score=170.2 identity=32.3 coverage=78.57142857142857)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=362 to=384)
AMDSBAU_5_28
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19708..20406
DNA (699bp) protein (233aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain
PAS domain S-box/diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CBL03739.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" sou
PAS domain S-box/diguanylate cyclase (GGDEF) domain n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E7P2_9ACTN (db=UNIREF evalue=1.8e-17 bit_score=95.5 identity=31.6 coverage=81.54506437768241)
(db=HMMPfam db_id=PF00563 from=7 to=213 evalue=1.6e-34 interpro_id=IPR001633 interpro_description=Diguanylate phosphodiesterase, EAL domain)
AMDSBAU_5_29
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20528..21859
DNA (1332bp) protein (444aa)
Transposase {ECO:0000313|EMBL:CCM65451.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Transposase IS4 family protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0S1H3_MYCXE (db=UNIREF evalue=7.2e-108 bit_score=396.7 identity=58.0 coverage=77.02702702702703)
Transposase IS4 family protein n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0S1H3_MYCXE
transposase IS4 family protein
AMDSBAU_5_30
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22169..24433)
DNA (2265bp) protein (755aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM42964.1}; Flags: Precursor;; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfospo
Uncharacterized protein n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4DAZ0_DESAJ
Uncharacterized protein n=1 Tax=Desulfosporosinus acidiphilus SJ4 RepID=I4DAZ0_9FIRM (db=UNIREF evalue=1.8e-111 bit_score=409.5 identity=35.0 coverage=98.94039735099338)
Displaying items 1-30 of 54 in total

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