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AMDSBAU_25

Alias: SULFO_OTHER_25

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBAU_25_1
unknown

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comp(1..183)
DNA (183bp) protein (61aa)
(db=HMMPfam db_id=PF02643 from=18 to=59 evalue=5.4e-11 interpro_id=IPR003795 interpro_description=Protein of unknown function DUF192)
AMDSBAU_25_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(195..1112)
DNA (918bp) protein (306aa)
type II secretion system F domain-containing protein
Type II secretion system F domain protein {ECO:0000313|EMBL:AEJ41226.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillu
Type II secretion system F domain protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I7F9_SULAT (db=UNIREF evalue=3.6e-66 bit_score=257.7 identity=46.8 coverage=96.07843137254902)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
AMDSBAU_25_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1121..2044)
DNA (924bp) protein (308aa)
tadB; type II secretion system F domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AEW04327.1}; Flags: Precursor;; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillu
Type II secretion system F domain protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I7G0_SULAT (db=UNIREF evalue=2.0e-77 bit_score=295.0 identity=50.3 coverage=96.75324675324676)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
AMDSBAU_25_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2044..3402)
DNA (1359bp) protein (453aa)
Type II secretion system protein E n=2 Tax=Sulfobacillus acidophilus RepID=G8U193_SULAD
Type II secretion system protein E n=2 Tax=Sulfobacillus acidophilus RepID=G8U193_SULAD (db=UNIREF evalue=4.8e-176 bit_score=623.2 identity=70.5 coverage=98.67549668874173)
type II secretion system protein E
type II secretion system protein E
AMDSBAU_25_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3415..4563)
DNA (1149bp) protein (383aa)
Cobyrinic acid ac-diamide synthase
Uncharacterized protein {ECO:0000313|EMBL:AEW04330.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Cobyrinic acid ac-diamide synthase n=2 Tax=Sulfobacillus acidophilus RepID=G8TS04_SULAD (db=UNIREF evalue=2.9e-49 bit_score=201.8 identity=35.9 coverage=97.12793733681463)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=123 to=370 evalue=5.3e-36)
AMDSBAU_25_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4593..5342)
DNA (750bp) protein (250aa)
Flp pilus assembly protein CpaB
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:AEJ41230.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" sourc
Flp pilus assembly protein CpaB n=2 Tax=Sulfobacillus acidophilus RepID=F8I7G3_SULAT (db=UNIREF evalue=3.5e-59 bit_score=234.2 identity=49.4 coverage=96.39999999999999)
seg (db=Seg db_id=seg from=50 to=59)
AMDSBAU_25_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5431..5604)
DNA (174bp) protein (58aa)
Flp/Fap pilin component
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I7G2_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ41229.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
seg (db=Seg db_id=seg from=17 to=36)
AMDSBAU_25_8
unknown

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5679..5924
DNA (246bp) protein (82aa)
5679..5924 + ( gc_cont=0.528)
AMDSBAU_25_9
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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5955..7445
DNA (1491bp) protein (497aa)
Putative uncharacterized protein n=1 Tax=Acidobacterium sp. MP5ACTX9 RepID=E8X670_ACISM (db=UNIREF evalue=4.0e-22 bit_score=112.1 identity=24.7 coverage=97.38430583501007)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY17147.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter si
seg (db=Seg db_id=seg from=181 to=193)
AMDSBAU_25_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7495..8661
DNA (1167bp) protein (389aa)
Cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase
Uncharacterized protein {ECO:0000313|EMBL:AEW04330.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Cobyrinic acid ac-diamide synthase n=2 Tax=Sulfobacillus acidophilus RepID=G8TS04_SULAD
AMDSBAU_25_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8839..11256)
DNA (2418bp) protein (806aa)
Glycoside hydrolase family 31 n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8TTJ1_SULAD
Glycoside hydrolase family 31 n=1 Tax=Sulfobacillus acidophilus DSM 10332 RepID=G8TTJ1_SULAD (db=UNIREF evalue=4.6e-278 bit_score=963.0 identity=56.5 coverage=99.37965260545906)
glycoside hydrolase family protein rbh
glycoside hydrolase family protein rbh
AMDSBAU_25_12
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(11412..12596)
DNA (1185bp) protein (395aa)
Oxidoreductase {ECO:0000313|EMBL:EGG48856.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
Oxidoreductase n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NCJ1_9ACTO
Oxidoreductase n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NCJ1_9ACTO (db=UNIREF evalue=2.9e-108 bit_score=397.9 identity=53.0 coverage=98.22784810126582)
oxidoreductase
AMDSBAU_25_13
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(12844..13803)
DNA (960bp) protein (320aa)
xylose isomerase Tax=RBG_16_Chloroflexi_54_18_curated
Sugar phosphate isomerase/epimerase n=1 Tax=Desmospora sp. 8437 RepID=F5SJP6_9BACL
Sugar phosphate isomerase/epimerase n=1 Tax=Desmospora sp. 8437 RepID=F5SJP6_9BACL (db=UNIREF evalue=5.2e-108 bit_score=396.7 identity=59.0 coverage=99.375)
xylose isomerase domain-containing protein
AMDSBAU_25_14
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(14035..15129)
DNA (1095bp) protein (365aa)
oxidoreductase domain-containing protein
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABQ91812.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflex
Oxidoreductase domain protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UYV9_ROSS1
AMDSBAU_25_15
Bacillus cellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15126..15890)
DNA (765bp) protein (255aa)
UPI0002892EEE related cluster n=1 Tax=unknown RepID=UPI0002892EEE
xylose isomerase
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:ADU30526.1}; TaxID=649639 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cellulos
(db=HMMPfam db_id=PF01261 from=23 to=203 evalue=2.4e-24 interpro_id=IPR012307 interpro_description=Xylose isomerase, TIM barrel domain)
AMDSBAU_25_16
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16022..16939)
DNA (918bp) protein (306aa)
aldo/keto reductase
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACV59214.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius sub
Aldo/keto reductase n=4 Tax=Alicyclobacillus acidocaldarius RepID=F8IG79_ALIAT
AMDSBAU_25_17
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(17119..20358)
DNA (3240bp) protein (1080aa)
Uncharacterized protein {ECO:0000313|EMBL:EPZ46056.1}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestr
Alpha-D-mannosidase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7B2_9BACL (db=UNIREF evalue=0.0 bit_score=1085.9 identity=52.2 coverage=95.37037037037037)
Alpha-D-mannosidase n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7B2_9BACL
alpha-mannosidase
AMDSBAU_25_18
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(20775..22172)
DNA (1398bp) protein (466aa)
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EFH90103.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Kte
Extracellular solute-binding protein family 1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD52_9CHLR
Extracellular solute-binding protein family 1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TD52_9CHLR (db=UNIREF evalue=4.1e-114 bit_score=417.5 identity=49.3 coverage=92.27467811158799)
extracellular solute-binding protein family 1 protein
AMDSBAU_25_19
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(22278..23111)
DNA (834bp) protein (278aa)
binding-protein-dependent transport systems inner membrane component
Contig_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03528.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q4Z8_KRIFD (db=UNIREF evalue=7.8e-60 bit_score=236.5 identity=44.7 coverage=97.84172661870504)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
AMDSBAU_25_20
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23144..24064)
DNA (921bp) protein (307aa)
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EED05910.1}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacill
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DVD7_9BACL (db=UNIREF evalue=5.8e-72 bit_score=276.9 identity=48.8 coverage=90.22801302931596)
binding-protein-dependent transporters inner membrane component
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
AMDSBAU_25_21
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24087..24899)
DNA (813bp) protein (271aa)
HTH-type transcriptional regulator DegA {ECO:0000313|EMBL:KHF35654.1}; TaxID=1472719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. P1
transcriptional regulator
Transcriptional regulator n=2 Tax=Geobacillus RepID=A4IPD0_GEOTN (db=UNIREF evalue=1.2e-17 bit_score=96.3 identity=29.9 coverage=87.4538745387454)
seg (db=Seg db_id=seg from=149 to=159)
AMDSBAU_25_22
unknown

Not on your lists

comp(24902..24982)
DNA (81bp) protein (27aa)
24902..24982 - ( gc_cont=0.481)
Displaying 22 items

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