ggKbase home page

AMDSBAU_41

Alias: SULFO_OTHER_41

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBAU_41_1
unknown

Not on your lists

1..225
DNA (225bp) protein (75aa)
seg (db=Seg db_id=seg from=43 to=53)
AMDSBAU_41_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

637..741
DNA (105bp) protein (35aa)
transposase
Transposase {ECO:0000313|EMBL:AEJ38718.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus aci
Transposase n=1 Tax=Sulfobacillus acidophilus TPY RepID=F8I750_SULAT (db=UNIREF evalue=1.1e-08 bit_score=63.5 identity=84.8 coverage=91.42857142857143)
AMDSBAU_41_3
unknown

Not on your lists

696..1535
DNA (840bp) protein (280aa)
seg (db=Seg db_id=seg from=2 to=13)
seg (db=Seg db_id=seg from=189 to=202)
seg (db=Seg db_id=seg from=248 to=265)
AMDSBAU_41_4
unknown

Not on your lists

comp(2313..2975)
DNA (663bp) protein (221aa)
2313..2975 - ( gc_cont=0.611)
AMDSBAU_41_5
unknown

Not on your lists

2994..3122
DNA (129bp) protein (43aa)
2994..3122 + ( gc_cont=0.597)
AMDSBAU_41_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3321..3920
DNA (600bp) protein (200aa)
Transposase IS4 family protein {ECO:0000313|EMBL:ACS54430.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;
Transposase IS4 family protein n=2 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6AUF2_RHILS (db=UNIREF evalue=7.2e-23 bit_score=113.2 identity=35.7 coverage=95.0)
Transposase IS4 family protein
seg (db=Seg db_id=seg from=150 to=164)
AMDSBAU_41_7
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3950..4216
DNA (267bp) protein (89aa)
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:ACV58542.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldariu
Transposase mutator type n=5 Tax=Alicyclobacillus RepID=F8IDG1_ALIAT (db=UNIREF evalue=2.0e-25 bit_score=120.6 identity=66.7 coverage=96.62921348314607)
(db=HMMPfam db_id=PF00872 from=2 to=87 evalue=5.4e-23 interpro_id=IPR001207 interpro_description=Transposase, mutator type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
AMDSBAU_41_8
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4250..4516
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:CCQ94343.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1Z9N9_9CLOT
transposase mutator type
seg (db=Seg db_id=seg from=25 to=34)
AMDSBAU_41_9
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4858..5448)
DNA (591bp) protein (197aa)
shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1295642 species="Bacteria; Firmicutes; Bacilli; B
Shikimate kinase n=1 Tax=Geobacillus thermoglucosidasius C56-YS93 RepID=F8CXC6_GEOTC (db=UNIREF evalue=3.7e-40 bit_score=170.6 identity=51.8 coverage=83.75634517766497)
SHIKIMATE_KINASE (db=PatternScan db_id=PS01128 from=75 to=100 evalue=0.0 interpro_id=IPR023000 interpro_description=Shikimate kinase, conserved site)
AMDSBAU_41_10
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6150..6563)
DNA (414bp) protein (138aa)
transposase IS204/IS1001/IS1096/IS1165 family protein
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:ADU50486.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; T
Transposase IS204/IS1001/IS1096/IS1165 family protein n=1 Tax=Thermaerobacter marianensis DSM 12885 RepID=E6SG69_THEM7 (db=UNIREF evalue=3.3e-27 bit_score=127.1 identity=50.8 coverage=94.20289855072464)
(db=HMMPfam db_id=PF01610 from=11 to=108 evalue=9.8e-15 interpro_id=IPR002560 interpro_description=Transposase, IS204/IS1001/IS1096/IS1165 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
AMDSBAU_41_11
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6560..6988)
DNA (429bp) protein (143aa)
Transposase IS204/IS1001/IS1096/IS1165 n=1 Tax=Thermacetogenium phaeum DSM 12270 RepID=K4LVB7_9THEO (db=UNIREF evalue=3.0e-07 bit_score=60.8 identity=31.3 coverage=64.33566433566433)
AMDSBAU_41_12
unknown

Not on your lists

7429..7674
DNA (246bp) protein (82aa)
7429..7674 + ( gc_cont=0.455)
AMDSBAU_41_13
unknown

Not on your lists

7679..8206
DNA (528bp) protein (176aa)
seg (db=Seg db_id=seg from=11 to=24)
AMDSBAU_41_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8891..9031)
DNA (141bp) protein (47aa)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I6F0_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ38630.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
AMDSBAU_41_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9028..9633)
DNA (606bp) protein (202aa)
Resolvase domain-containing protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03958.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Resolvase domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TY51_SULAD (db=UNIREF evalue=6.5e-56 bit_score=223.0 identity=58.6 coverage=97.02970297029702)
(db=HMMPfam db_id=PF00239 from=3 to=147 evalue=1.5e-34 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
AMDSBAU_41_16
unknown

Not on your lists

comp(10240..10896)
DNA (657bp) protein (219aa)
seg (db=Seg db_id=seg from=15 to=23)
seg (db=Seg db_id=seg from=190 to=203)
AMDSBAU_41_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10859..12265)
DNA (1407bp) protein (469aa)
ParB domain-containing protein nuclease
Uncharacterized protein {ECO:0000313|EMBL:AEW04705.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
ParB domain protein nuclease n=2 Tax=Sulfobacillus acidophilus RepID=F8I437_SULAT (db=UNIREF evalue=2.2e-78 bit_score=298.9 identity=48.6 coverage=73.56076759061834)
coiled-coil (db=Coil db_id=coil from=330 to=351 evalue=NA)
AMDSBAU_41_18
unknown

Not on your lists

comp(12297..12569)
DNA (273bp) protein (91aa)
seg (db=Seg db_id=seg from=9 to=23)
AMDSBAU_41_19
unknown

Not on your lists

comp(12606..12773)
DNA (168bp) protein (56aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=54)
AMDSBAU_41_20
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12792..13820)
DNA (1029bp) protein (343aa)
Putative MinD-like protein {ECO:0000313|EMBL:AEP14331.1}; TaxID=338644 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sul
Putative MinD-like protein n=2 Tax=Sulfobacillus thermotolerans RepID=G5CIY8_9FIRM (db=UNIREF evalue=1.3e-24 bit_score=119.8 identity=34.4 coverage=73.46938775510205)
seg (db=Seg db_id=seg from=258 to=269)
seg (db=Seg db_id=seg from=154 to=166)
AMDSBAU_41_21
Sulfobacillus thermotolerans, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13856..15019)
DNA (1164bp) protein (388aa)
Uncharacterized protein {ECO:0000313|EMBL:AEP14296.1}; TaxID=338644 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Putative uncharacterized protein orfY45 n=2 Tax=Sulfobacillus thermotolerans RepID=G5CJ84_9FIRM (db=UNIREF evalue=1.4e-59 bit_score=236.1 identity=38.1 coverage=88.14432989690721)
seg (db=Seg db_id=seg from=113 to=127)
seg (db=Seg db_id=seg from=281 to=292)
AMDSBAU_41_22
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15113..19132)
DNA (4020bp) protein (1340aa)
Putative uncharacterized protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQQ5_9BACL (db=UNIREF evalue=4.4e-84 bit_score=319.3 identity=30.6 coverage=64.77611940298507)
Putative uncharacterized protein n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQQ5_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EED07566.1}; TaxID=543302 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius
hypothetical protein
AMDSBAU_41_23
unknown

Not on your lists

comp(19215..19877)
DNA (663bp) protein (221aa)
seg (db=Seg db_id=seg from=32 to=51)
seg (db=Seg db_id=seg from=192 to=198)
Displaying 23 items

View Taxonomy