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AMDSBA2_102

Alias: SULFO_6_102

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA2_102_1
Thermoanaerobacter mathranii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1..918)
-----------------
DNA (918bp)
protein (306aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH60082.1}; TaxID=583358 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanae
Uncharacterized protein n=12 Tax=Thermoanaerobacter RepID=D7ART8_THEM3
seg (db=Seg db_id=seg from=26 to=42)
AMDSBA2_102_2
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(915..1595)
-----------------
DNA (681bp)
protein (227aa)
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
ABC transporter ATP-binding protein
ABC transporter related protein n=1 Tax=Thermosediminibacter oceani DSM 16646 RepID=D9S0M6_THEOJ (db=UNIREF evalue=6.8e-62 bit_score=243.0 identity=56.2 coverage=96.0352422907489)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=143 to=157 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
AMDSBA2_102_3
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1592..3070)
-----------------
DNA (1479bp)
protein (493aa)
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ADL53129.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cel
Efflux transporter, RND family, MFP subunit n=1 Tax=Clostridium cellulovorans 743B RepID=D9SVR8_CLOC7 (db=UNIREF evalue=1.0e-25 bit_score=124.0 identity=23.7 coverage=94.7261663286004)
coiled-coil (db=Coil db_id=coil from=268 to=289 evalue=NA)
AMDSBA2_102_4
Metallosphaera sedula, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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3574..4965
-----------------
DNA (1392bp)
protein (464aa)
major facilitator superfamily transporter
major facilitator superfamily transporter
Major facilitator transporter n=4 Tax=Amycolatopsis RepID=D8HVA0_AMYMU
Major facilitator transporter n=3 Tax=Amycolatopsis mediterranei RepID=I7DZN6_AMYMD (db=UNIREF evalue=3.2e-106 bit_score=391.3 identity=43.6 coverage=94.82758620689656)
AMDSBA2_102_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5051..5863
-----------------
DNA (813bp)
protein (271aa)
formate dehydrogenase family accessory protein FdhD
Protein FdhD homolog {ECO:0000256|SAAS:SAAS00093832}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfoba
Protein fdhD n=2 Tax=Sulfobacillus acidophilus RepID=F8I8J0_SULAT (db=UNIREF evalue=2.9e-59 bit_score=234.6 identity=50.8 coverage=94.4649446494465)
fdhD_narQ: formate dehydrogenase family acc (db=HMMTigr db_id=TIGR00129 from=27 to=267 evalue=3.0e-48 interpro_id=IPR003786 interpro_description=Formate dehydrogenase, subunit FdhD GO=Molecular Function: formate dehydrogenase (NAD+) activity (GO:0008863), Cellular Component: formate dehydrogenase complex (GO:0009326))
AMDSBA2_102_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5967..6923
-----------------
DNA (957bp)
protein (319aa)
oxyR; LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:AEW04773.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Transcriptional regulator, LysR family protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I3F1_SULAT (db=UNIREF evalue=5.8e-43 bit_score=180.6 identity=36.1 coverage=91.84952978056427)
(db=HMMPfam db_id=PF00126 from=9 to=68 evalue=1.6e-16 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA2_102_7
unknown

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6961..7449
-----------------
DNA (489bp)
protein (163aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=155)
AMDSBA2_102_8
unknown

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7615..7764
-----------------
DNA (150bp)
protein (50aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
(db=HMMPfam db_id=PF11067 from=16 to=49 evalue=0.00026 interpro_id=IPR021296 interpro_description=Protein of unknown function DUF2868)
AMDSBA2_102_9
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7988..9238
-----------------
DNA (1251bp)
protein (417aa)
formyl-coenzyme A transferase (EC:2.8.3.16)
formyl-coenzyme A transferase (EC:2.8.3.16)
Formyl-CoA:oxalate CoA-transferase {ECO:0000256|HAMAP-Rule:MF_00742}; Short=FCOCT {ECO:0000256|HAMAP-Rule:MF_00742};; EC=2.8.3.16 {ECO:0000256|HAMAP-Rule:MF_00742};; Formyl-coenzyme A transferase {ECO
Formyl-coenzyme A transferase n=4 Tax=Cupriavidus RepID=B3RB29_CUPTR
AMDSBA2_102_10
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9277..10104
-----------------
DNA (828bp)
protein (276aa)
oxc; oxalyl-CoA decarboxylase Oxc (EC:4.1.1.8)
oxc; oxalyl-CoA decarboxylase Oxc (EC:4.1.1.8)
Oxalyl-CoA decarboxylase Oxc {ECO:0000313|EMBL:AJK49169.1}; EC=4.1.1.8 {ECO:0000313|EMBL:AJK49169.1};; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderia
Oxalyl-CoA decarboxylase n=6 Tax=Providencia RepID=D4C5Q1_PRORE
Displaying 10 items

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