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ar4r2_scaffold_4484

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_4484_1
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..871)
DNA (870bp) protein (290aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DA53_THICA
Phenylalanyl-tRNA synthetase subunit beta
ar4r2_scaffold_4484_2
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(861..1310)
DNA (450bp) protein (150aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=3 Tax=Acinetobacter RepID=N8TS56_ACILW
ar4r2_scaffold_4484_3
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1320..2276)
DNA (957bp) protein (319aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=CG_Thiomicrospira_01
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DA54_THICA
Phenylalanyl-tRNA synthetase subunit alpha
ar4r2_scaffold_4484_4
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2429..2755)
DNA (327bp) protein (109aa)
50S ribosomal protein L20 n=1 Tax=Methylotenera RepID=UPI0003805774
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" so
ar4r2_scaffold_4484_5
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2777..2974)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=RL35_THICR
rpmI; 50S ribosomal protein L35
rpmI; 50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=CG_Thiomicrospira_01
ar4r2_scaffold_4484_6
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3085..3621)
DNA (537bp) protein (179aa)
Translation initiation factor IF-3 n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DCF7_9GAMM
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsia
ar4r2_scaffold_4484_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3668..5587)
DNA (1920bp) protein (640aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
thrS; threonine--tRNA ligase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQ59_9GAMM rbh
ar4r2_scaffold_4484_8
Aeromonas salmonicida, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5677..6513)
DNA (837bp) protein (279aa)
Hydrolase, carbon-nitrogen family n=2 Tax=Aeromonas veronii RepID=F4DE23_AERVB
carbon-nitrogen family hydrolase
Amidohydrolase {ECO:0000313|EMBL:KFN18486.1}; TaxID=645 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas salmonicida.;"
ar4r2_scaffold_4484_9
Vibrio sp. RC341, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6494..8191)
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI0003767920
Possible exported protein {ECO:0000313|EMBL:EEX67524.1}; TaxID=675810 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. RC341.;"
Possible exported protein
ar4r2_scaffold_4484_10
unknown

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comp(8151..10064)
DNA (1914bp) protein (638aa)
hypothetical protein n=1 Tax=Gayadomonas joobiniege RepID=UPI000366078C
ar4r2_scaffold_4484_11
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10065..11555)
DNA (1491bp) protein (497aa)
ribonuclease G n=1 Tax=Thiomicrospira arctica RepID=UPI0003623E95
Ribonuclease G {ECO:0000313|EMBL:KDN96639.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus
ribonuclease G
ar4r2_scaffold_4484_12
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11566..11865)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI00036CF63F
hypothetical protein Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
hypothetical protein
ar4r2_scaffold_4484_13
Sulfurospirillum sp. SCADC, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11871..12128)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Vibrio sp. 23023 RepID=A9M4N6_9VIBR
Transcriptional regulator {ECO:0000313|EMBL:KFL34257.1}; TaxID=1537915 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulf
hypothetical protein
ar4r2_scaffold_4484_14
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(12138..12674)
DNA (537bp) protein (179aa)
DNA methyltransferase n=1 Tax=Arcobacter butzleri 7h1h RepID=S5P1E6_9PROT
DNA methyltransferase
DNA methyltransferase {ECO:0000313|EMBL:AGR76369.1}; TaxID=1036172 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter but
Displaying 14 items

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