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ar4r2_scaffold_11460

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_11460_1
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..126
DNA (126bp) protein (42aa)
accD; acetyl-CoA carboxylase subunit beta; K01963 acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2] Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
ar4r2_scaffold_11460_2
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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126..1409
DNA (1284bp) protein (428aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] Tax=CG_Thiomicrospira_01
FolC bifunctional folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HH1_THICR
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
ar4r2_scaffold_11460_3
unknown

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1399..2040
DNA (642bp) protein (214aa)

This feature has no annotations

ar4r2_scaffold_11460_4
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2434..3795
DNA (1362bp) protein (454aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DC14_THICA
ar4r2_scaffold_11460_5
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3785..4963
DNA (1179bp) protein (393aa)
O-succinylhomoserine sulfhydrylase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4D8F8_9GAMM
O-succinylhomoserine sulfhydrylase
O-succinylhomoserine sulfhydrylase {ECO:0000313|EMBL:AHF01434.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source
ar4r2_scaffold_11460_6
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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5425..6030
DNA (606bp) protein (202aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5T2Z0_9GAMM
23S rRNA methyltransferase
ar4r2_scaffold_11460_7
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6023..8005
DNA (1983bp) protein (661aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotric
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DC18_THICA
ar4r2_scaffold_11460_8
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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8015..8398
DNA (384bp) protein (128aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
Dihydropteroate synthase n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SSZ5_PLABD
ar4r2_scaffold_11460_9
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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8382..8783
DNA (402bp) protein (134aa)
folP_[H]; Dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00036CCF2D
ar4r2_scaffold_11460_10
Vibrio metschnikovii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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8806..10146
DNA (1341bp) protein (447aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=675813 species="Bacteri
Phosphoglucosamine mutase n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P1A9_VIBME
phosphoglucosamine mutase
ar4r2_scaffold_11460_11
Alcanivorax borkumensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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10473..11147
DNA (675bp) protein (225aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00147}; Short=TIM {ECO:0000255|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000255|HAMAP-Rule:MF_00147};; Triose-phosphate isomerase {ECO:0000255|HAMAP-
Triosephosphate isomerase n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=TPIS_ALCBS
ar4r2_scaffold_11460_12
Halomonas elongata, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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11157..11462
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9) RepID=E1VAS5_HALED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBV44024.1}; TaxID=768066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas elongata (
ar4r2_scaffold_11460_trna_1
unknown

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11424..11508
DNA (85bp)
transferRNA
ar4r2_scaffold_11460_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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11564..11905
DNA (342bp) protein (114aa)
nuoA; NADH dehydrogenase I subunit A (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A id=1326642 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ar4r2_scaffold_11460_14
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11896..12351
DNA (456bp) protein (152aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit B {ECO:0000255|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000255|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000255|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH-quinone oxidoreductase subunit B n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=NUOB_THICR
ar4r2_scaffold_11460_15
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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12373..13044
DNA (672bp) protein (224aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00037F6EC2
NADH dehydrogenase subunit C
ar4r2_scaffold_11460_16
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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13046..13630
DNA (585bp) protein (195aa)
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
NADH dehydrogenase subunit D n=1 Tax=Thiomicrospira halophila RepID=UPI00037E9BFC
ar4r2_scaffold_11460_17
Kangiella koreensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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13675..14097
DNA (423bp) protein (141aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
NADH dehydrogenase subunit D n=1 Tax=Acidovorax radicis RepID=UPI000237710C
NADH dehydrogenase subunit D
ar4r2_scaffold_11460_18
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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14097..14675
DNA (579bp) protein (193aa)
NADH-quinone oxidoreductase subunit E (EC:1.6.99.5)
NADH-quinone oxidoreductase, E subunit n=1 Tax=Beggiatoa alba B18LD RepID=I3CGL3_9GAMM
NADH dehydrogenase {ECO:0000313|EMBL:KDN95485.1}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio mar
ar4r2_scaffold_11460_19
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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14687..15073
DNA (387bp) protein (129aa)
NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
NADH dehydrogenase I chain F {ECO:0000313|EMBL:ABB41418.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ABB41418.1};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickett
NADH dehydrogenase I chain F n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31HF5_THICR
ar4r2_scaffold_11460_20
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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15102..15722
DNA (621bp) protein (207aa)
NADH dehydrogenase {ECO:0000313|EMBL:KDN95484.1}; EC=1.6.99.5 {ECO:0000313|EMBL:KDN95484.1};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hy
NADH dehydrogenase n=1 Tax=Thiomicrospira halophila RepID=UPI00036D6244
NADH dehydrogenase
ar4r2_scaffold_11460_21
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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15762..16943
DNA (1182bp) protein (394aa)
NADH-quinone oxidoreductase subunit G (EC:1.6.99.3)
NADH-quinone oxidoreductase, chain G {ECO:0000313|EMBL:AEG31415.1}; EC=1.6.99.3 {ECO:0000313|EMBL:AEG31415.1};; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Pisc
NADH-quinone oxidoreductase, chain G n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DC29_THICA
Displaying 22 items

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