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ar4r2_scaffold_533

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_533_1
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(314..808)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T3X2_META2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE22671.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicro
ar4r2_scaffold_533_2
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(894..2093)
DNA (1200bp) protein (400aa)
AAA family ATPase; K07133 Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
Putative uncharacterized protein id=4837068 bin=GWC2_Deltaproteobacteria_56_8 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
ATPase (AAA+ superfamily)-like protein
ar4r2_scaffold_533_3
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2329..2736)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C065_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE16312.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
ar4r2_scaffold_533_4
BJP_IG2069_Syntrophobacterales_46_30, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2796..3203)
DNA (408bp) protein (136aa)
methylglyoxal synthase (EC:4.2.3.3)
methylglyoxal synthase n=1 Tax=Pedobacter arcticus RepID=UPI0002DC3004
Tax=BJP_IG2069_Syntrophobacterales_46_30
ar4r2_scaffold_533_5
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3446..3934
DNA (489bp) protein (163aa)
Transcriptional regulator, CarD family n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B5C0_TURPD
transcriptional regulator, CarD family
Transcriptional regulator, CarD family {ECO:0000313|EMBL:AFM12477.1}; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC
ar4r2_scaffold_533_6
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3991..4983
DNA (993bp) protein (331aa)
PilT protein domain protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B5B9_TURPD rbh
PilT protein domain protein rbh
PilT protein domain protein {ECO:0000313|EMBL:AFM12476.1}; Flags: Precursor;; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (str
ar4r2_scaffold_533_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

4996..5772
DNA (777bp) protein (259aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60 4.6.1.12)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EY92_9FIRM
ar4r2_scaffold_533_8
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(5748..7073)
DNA (1326bp) protein (442aa)
GTPase Der n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B1Z9_TURPD rbh
ribosome-associated GTPase EngA rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Le
ar4r2_scaffold_533_9
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(7073..7798)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B5G4_TURPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM12521.1}; Flags: Precursor;; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain
ar4r2_scaffold_533_10
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7838..8221
DNA (384bp) protein (128aa)
Anti-sigma F factor antagonist, anti sigma b factor antagonist n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WLQ9_9SPIO
anti-sigma F factor antagonist, anti sigma b factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinispira.;" source="Salinispira pacifica.;"
ar4r2_scaffold_533_11
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8308..8739
DNA (432bp) protein (144aa)
Flagellar protein FliS n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4BAI7_TURPD
flagellar protein FliS
Flagellar protein FliS {ECO:0000313|EMBL:AFM14294.1}; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / DSM
ar4r2_scaffold_533_12
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8736..9944)
DNA (1209bp) protein (403aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B0T2_TURPD
MiaB-like tRNA modifying enzyme
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:AFM10889.1}; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-11
ar4r2_scaffold_533_13
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10077..10856)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037E68CB
Tax=BJP_IG2069_Spirochaetales_48_31
ar4r2_scaffold_533_14
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11141..12019
DNA (879bp) protein (293aa)
Prephenate dehydrogenase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4BB87_TURPD
Prephenate dehydrogenase
Prephenate dehydrogenase {ECO:0000313|EMBL:AFM14544.1}; Flags: Precursor;; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain
ar4r2_scaffold_533_15
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12009..13349
DNA (1341bp) protein (447aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240533};; Flags: Precurs
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B7U5_TURPD rbh
ar4r2_scaffold_533_16
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13346..14086
DNA (741bp) protein (247aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240549}; EC=2.5.1.19 {ECO:0000256|RuleBase:RU000531, ECO:0000256|SAAS:SAAS00240533};; Flags: Precurs
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B7U5_TURPD
ar4r2_scaffold_533_17
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


14100..15815
DNA (1716bp) protein (572aa)
30S ribosomal protein S1 n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B7U6_TURPD rbh
SSU ribosomal protein S1P rbh
SSU ribosomal protein S1P {ECO:0000313|EMBL:AFM13353.1}; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / D
ar4r2_scaffold_533_18
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15943..17067
DNA (1125bp) protein (375aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=869212 species="Bacteria
3-dehydroquinate synthase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4BB62_TURPD
ar4r2_scaffold_533_19
Denitrovibrio acetiphilus, Denitrovibrio, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

17075..17539
DNA (465bp) protein (155aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
3-dehydroquinate dehydratase n=1 Tax=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) RepID=D4H1C0_DENA2
ar4r2_scaffold_533_20
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17539..18858
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4BB64_TURPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM14521.1}; Flags: Precursor;; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain
ar4r2_scaffold_533_21
Sulfurihydrogenibium yellowstonense, Sulfurihydrogenibium, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

18858..19043
DNA (186bp) protein (62aa)
Tautomerase {ECO:0000256|RuleBase:RU362032}; EC=5.3.2.- {ECO:0000256|RuleBase:RU362032};; TaxID=432331 species="Bacteria; Aquificae; Aquificales; Hydrogenothermaceae; Sulfurihydrogenibium.;" source="S
Conserved domain protein n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FI73_9AQUI
4-oxalocrotonate tautomerase family protein
ar4r2_scaffold_533_22
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19152..19499
DNA (348bp) protein (116aa)
Tax=BJP_IG2069_Spirochaetales_48_31
ar4r2_scaffold_533_23
unknown

Not on your lists

19522..19989
DNA (468bp) protein (156aa)

This feature has no annotations

ar4r2_scaffold_533_24
Leptospira sp. B5-022, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19970..20512
DNA (543bp) protein (181aa)
Terminase, ATPase subunit, gpP-like protein n=1 Tax=Leptospira sp. B5-022 RepID=M6D771_9LEPT
Terminase, ATPase subunit, gpP-like protein {ECO:0000313|EMBL:EMJ99972.1}; TaxID=1242992 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira sp. B5-022.;"
rpoE; RNA polymerase ECF-type sigma factor
ar4r2_scaffold_533_25
unknown

Not on your lists

20484..20915
DNA (432bp) protein (144aa)

This feature has no annotations

ar4r2_scaffold_533_26
Lactobacillus fabifermentans, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21170..21634
DNA (465bp) protein (155aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Acidaminococcus sp. CAG:542 RepID=R7M3C5_9FIRM
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
6,7-dimethyl-8-ribityllumazine synthase
ar4r2_scaffold_533_27
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21631..22035
DNA (405bp) protein (135aa)
N utilization substance protein B homolog n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B7H8_TURPD
NusB antitermination factor
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=869212 species="Bacteria; Spiro
ar4r2_scaffold_533_28
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

22032..24038
DNA (2007bp) protein (669aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B8C8_TURPD rbh
Tetratricopeptide TPR_2 repeat-containing protein rbh
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AFM13535.1}; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (
ar4r2_scaffold_533_29
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24043..24477)
DNA (435bp) protein (145aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=926556 specie
Putative Holliday junction resolvase n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FZT8_ECHVK
RNAse H-fold protein YqgF
ar4r2_scaffold_533_30
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(24458..25495)
DNA (1038bp) protein (346aa)
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase (EC:2.3.1.191) Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase id=5018281 bin=GWA2_Elusimicrobia_66_18 species=Turneriella parva genus=Turneriella taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum rbh
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
Displaying items 1-30 of 37 in total

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