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ar4r2_scaffold_795

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_795_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..2841
DNA (2841bp) protein (947aa)
Conserved repeat domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T3L9_ACIDE
Conserved repeat domain protein {ECO:0000313|EMBL:EER60925.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax del
hypothetical protein
ar4r2_scaffold_795_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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3173..4222
DNA (1050bp) protein (350aa)
ribosomal RNA large subunit methyltransferase N; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] Tax=CG_Hydro_01
ribosomal RNA large subunit methyltransferase N; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] id=12496851 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
ribosomal RNA large subunit methyltransferase N
ar4r2_scaffold_795_3
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4188..4745)
DNA (558bp) protein (186aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=349124 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI000365B8B3
histidinol-phosphate phosphatase family protein
ar4r2_scaffold_795_4
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4738..5319)
DNA (582bp) protein (194aa)
Phosphoheptose isomerase {ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|SAAS:SAAS00089180};; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclace
gmhA; phosphoheptose isomerase (EC:5.3.1.-)
ADP-heptose synthase / D-glycero-beta-D-manno-heptose 7-phosphate kinase n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y6S3_9RHOO
ar4r2_scaffold_795_5
Plesiomonas shigelloides, Plesiomonas, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5411..6841
DNA (1431bp) protein (477aa)
hldE; Bifunctional protein hldE [Includes: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 1-phosphate adenosyltransferase] (EC:2.7.1.- 2.7.7.-)
Bifunctional protein HldE n=1 Tax=Plesiomonas shigelloides 302-73 RepID=R8ATI3_PLESH rbh
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=1315976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
ar4r2_scaffold_795_6
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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6838..7794
DNA (957bp) protein (319aa)
ADP-L-glycero-D-manno-heptose-6-epimerase {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055252}; EC=5.1.3.20 {ECO:0000256|HAMAP-Rule:MF_01601, ECO:0000256|SAAS:SAAS00055236};; ADP-L-glycero
ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Azoarcus sp. KH32C RepID=H0PRV9_9RHOO
wcaG_rfaD; ADP-l-glycero-D-manno-heptose-6-epimerase
ar4r2_scaffold_795_7
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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7817..8836
DNA (1020bp) protein (340aa)
ADP-heptose-LPS heptosyltransferase II n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P2S2_AROAE
rfaF; ADP-heptose-LPS heptosyltransferase II
ADP-heptose-LPS heptosyltransferase II {ECO:0000313|EMBL:CAI08392.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatole
ar4r2_scaffold_795_8
endosymbiont of Riftia pachyptila, Gammaproteobacteria, Proteobacteria, Bacteria

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8847..9713
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=endosymbiont of Riftia pachyptila (vent Ph05) RepID=G2DCD1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGV51727.1}; TaxID=1048808 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont of Riftia pachyptila (ve
conserved protein of unknown function
ar4r2_scaffold_795_9
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9725..10642)
DNA (918bp) protein (306aa)
coproporphyrinogen III oxidase (EC:1.3.3.3)
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=HEM6_THISH
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000255|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000255|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000255|HAMAP-Rule:MF_00333};; Short=Coprop
ar4r2_scaffold_795_10
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10639..13893)
DNA (3255bp) protein (1085aa)
MscS Mechanosensitive ion channel n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K4I2_NITWC rbh
mechanosensitive ion channel protein MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ADJ27879.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcu
ar4r2_scaffold_795_11
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13901..14497)
DNA (597bp) protein (199aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852,
Threonylcarbamoyl-AMP synthase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1D9_NITHN
SUA5/yciO/yrdC domain-containing protein
ar4r2_scaffold_795_12
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14513..17065)
DNA (2553bp) protein (851aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=519989 species="Bacteria; Proteobact
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G0C4_9GAMM rbh
ar4r2_scaffold_795_13
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17065..17619)
DNA (555bp) protein (185aa)
Protein Smg homolog n=1 Tax=Spiribacter salinus M19-40 RepID=R4V281_9GAMM
Protein Smg homolog {ECO:0000256|HAMAP-Rule:MF_00598}; TaxID=1121013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas compost
hypothetical protein
ar4r2_scaffold_795_14
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17629..18741)
DNA (1113bp) protein (371aa)
Smf protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G0C6_9GAMM rbh
Smf protein {ECO:0000313|EMBL:EHQ51263.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira s
Rossmann fold nucleotide-binding protein Smf
ar4r2_scaffold_795_15
Marinobacter algicola, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18765..19976)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EY66_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:EDM48474.1}; TaxID=443152 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter algi
peptidoglycan-binding lysin domain-containing protein-containing protein
ar4r2_scaffold_795_16
Marichromatium purpuratum, Marichromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20190..20690
DNA (501bp) protein (167aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000360F86F
peptide deformylase
ar4r2_scaffold_795_17
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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20856..21812
DNA (957bp) protein (319aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1354791 species="
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000364954B
methionyl-tRNA formyltransferase
ar4r2_scaffold_795_18
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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21812..23104
DNA (1293bp) protein (431aa)
16S rRNA methyltransferase RsmB n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2Z4S5_PSEAC rbh
sun protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_795_19
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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23101..23691
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVS0_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96900.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacil
ar4r2_scaffold_795_20
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

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23702..24913
DNA (1212bp) protein (404aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K4J2_NITWC
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
integral membrane sensor signal transduction histidine kinase
Displaying 20 items

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