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AR_MS4_05142019_scaffold_1079

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_1079_1
CG_Delta_04, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

809..1750
-----------------
DNA (942bp)
protein (314aa)
Modification methylase BglII n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YEB3_9DELT
DNA methylase N-4/N-6 domain-containing protein
Tax=CG_Delta_04
AR_MS4_05142019_scaffold_1079_2
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1740..2351
-----------------
DNA (612bp)
protein (204aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YEB4_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX28873.1}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
hypothetical protein
AR_MS4_05142019_scaffold_1079_3
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2425..2751
-----------------
DNA (327bp)
protein (109aa)
Putative uncharacterized protein id=3444465 bin=GWC2_Syntrophus__56_31 species=Beijerinckia indica genus=Beijerinckia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWC2_Syntrophus_56_31_curated
AR_MS4_05142019_scaffold_1079_4
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2806..2991
-----------------
DNA (186bp)
protein (62aa)
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1079_5
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3086..4120
-----------------
DNA (1035bp)
protein (345aa)
pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family (EC:3.5.99.7)
Pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family {ECO:0000313|EMBL:ACY17751.1}; EC=3.5.99.7 {ECO:0000313|EMBL:ACY17751.1};; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
Pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXJ6_HALO1
AR_MS4_05142019_scaffold_1079_6
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4199..4927)
-----------------
DNA (729bp)
protein (243aa)
glnQ3; protein GlnQ3 (EC:3.6.3.21)
Glutamine transport ATP-binding protein GlnQ n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FZV7_9DELT
Glutamine transport ATP-binding protein GlnQ {ECO:0000313|EMBL:EMS77522.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotignum phosphitoxidans DSM 13687.;"
AR_MS4_05142019_scaffold_1079_7
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4949..5620)
-----------------
DNA (672bp)
protein (224aa)
Amino-acid ABC transporter inner membrane permease protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FR02_9DELT
Amino-acid ABC transporter inner membrane permease protein {ECO:0000313|EMBL:EMS77523.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotignum phosphitoxidans DSM 13687.;"
amino acid ABC transporter permease
AR_MS4_05142019_scaffold_1079_8
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5625..6293)
-----------------
DNA (669bp)
protein (223aa)
amino acid ABC transporter permease n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3A75E
Glutamine ABC transport system permease protein GlnP {ECO:0000313|EMBL:EMS77524.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotignum phosphitoxidans DSM 13687.;"
amino acid ABC transporter permease
AR_MS4_05142019_scaffold_1079_9
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6424..7227)
-----------------
DNA (804bp)
protein (268aa)
ABC transporter substrate-binding protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B46306
ABC-type amino acid transporter, periplasmic amino acid-binding protein
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
AR_MS4_05142019_scaffold_1079_10
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7345..7527)
-----------------
DNA (183bp)
protein (61aa)
Tax=BJP_IG2069_Syntrophobacterales_47_18
AR_MS4_05142019_scaffold_1079_11
unknown

Not on your lists

comp(7638..7937)
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

AR_MS4_05142019_scaffold_1079_12
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8095..8940
-----------------
DNA (846bp)
protein (282aa)
ABC-type tungstate transport system, solute-binding protein id=4033210 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
tungstate ABC transporter substrate-binding protein
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1079_13
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9089..9787
-----------------
DNA (699bp)
protein (233aa)
ABC-type tungstate transport permease protein id=4033299 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
tungstate ABC transporter permease
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1079_14
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9784..10911
-----------------
DNA (1128bp)
protein (376aa)
Tungsten transporter ATP binding protein id=4145091 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
tungsten transporter ATP binding protein
Tax=RBG_16_Deltaproteobacteria_58_17_curated
AR_MS4_05142019_scaffold_1079_15
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11030..12361
-----------------
DNA (1332bp)
protein (444aa)
NhaP-type Na+(K+)/H+ antiporter id=1965149 bin=GWE2_Gallionellales_58_10 species=Rheinheimera sp. A13L genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Kef-type K+ transport systems, membrane component
Tax=GWE2_Gallionellales_58_10_curated
AR_MS4_05142019_scaffold_1079_16
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12494..12661
-----------------
DNA (168bp)
protein (56aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WM62_GEOS8
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
AR_MS4_05142019_scaffold_1079_17
unknown

Not on your lists

12698..12889
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

AR_MS4_05142019_scaffold_1079_18
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12987..13928)
-----------------
DNA (942bp)
protein (314aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
2-dehydropantoate 2-reductase n=1 Tax=delta proteobacterium NaphS2 RepID=D8F746_9DELT
panE-2; 2-dehydropantoate 2-reductase
AR_MS4_05142019_scaffold_1079_19
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(14063..15121)
-----------------
DNA (1059bp)
protein (353aa)
Zn-dependent hydrolase including glyoxylase-like protein id=1242529 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Chloroflexi_60_22_curated
AR_MS4_05142019_scaffold_1079_20
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15769..17832
-----------------
DNA (2064bp)
protein (688aa)
transketolase (EC:2.2.1.1)
Transketolase id=4312028 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1079_21
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17907..19583
-----------------
DNA (1677bp)
protein (559aa)
Transaldolase id=1721576 bin=GWB2_Chloroflexi_49_20 species=uncultured bacterium W5-47b genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Phosphoglucose isomerase
Tax=CG_Syntroph_01
AR_MS4_05142019_scaffold_1079_22
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19676..21427
-----------------
DNA (1752bp)
protein (584aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
iorA; Indolepyruvate oxidoreductase subunit IorA (EC:1.2.7.8)
Indolepyruvate oxidoreductase subunit IorA n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RT44_9CLOT
AR_MS4_05142019_scaffold_1079_23
Aminomonas paucivorans, Aminomonas, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

21424..22014
-----------------
DNA (591bp)
protein (197aa)
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:EFQ24516.1}; EC=1.2.7.8 {ECO:0000313|EMBL:EFQ24516.1};; TaxID=584708 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminomonas.;" source="Aminomonas paucivorans DSM 12260.;"
Indolepyruvate ferredoxin oxidoreductase n=1 Tax=Aminomonas paucivorans DSM 12260 RepID=E3CY29_9BACT
pyruvate ferredoxin/flavodoxin oxidoreductase
AR_MS4_05142019_scaffold_1079_24
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22069..23151
-----------------
DNA (1083bp)
protein (361aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Desulfotomaculum ruminis DSM 2154 RepID=F6DN66_DESRL id=1241865 bin=RBG2 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG2 organism_group=Chloroflexi
D-isomer specific 2-hydroxyacid dehydrogenase protein
Tax=BJP_IG2069_Desfulfarculales_53_13
AR_MS4_05142019_scaffold_1079_25
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23402..24412
-----------------
DNA (1011bp)
protein (337aa)
Tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CDE7_DESTA
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
Tax=CG_Desulfarul_01
AR_MS4_05142019_scaffold_1079_26
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24425..24931
-----------------
DNA (507bp)
protein (169aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LVZ6_DESBD
Uncharacterized protein {ECO:0000313|EMBL:KJS00339.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
TRAP dicarboxylate transporter subunit DctQ
AR_MS4_05142019_scaffold_1079_27
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24935..26215
-----------------
DNA (1281bp)
protein (427aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Desulfospira joergensenii RepID=UPI0003B50985
Contig_16, whole genome shotgun sequence {ECO:0000313|EMBL:KIX14926.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
dctM2; protein DctM2
AR_MS4_05142019_scaffold_1079_28

Not on your lists

comp(26415..26945)
-----------------
DNA (531bp)
protein (177aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003729567
Marine sediment metagenome DNA, contig: S01H4_S07939 {ECO:0000313|EMBL:GAH03791.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
thioredoxin
AR_MS4_05142019_scaffold_1079_29
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27697..27963
-----------------
DNA (267bp)
protein (89aa)
Tax=RBG_16_Deltaproteobacteria_54_18_curated
AR_MS4_05142019_scaffold_1079_30
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28483..29823)
-----------------
DNA (1341bp)
protein (447aa)
Putative uncharacterized protein id=2167702 bin=GWB2_Nitrospirae_rel_47_37 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
hypothetical protein
Tax=CG_Syntroph_01
Displaying items 1-30 of 35 in total

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