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AR_MS4_05142019_scaffold_6960

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_6960_1
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..364
-----------------
DNA (363bp)
protein (121aa)
Putative Fe-S oxidoreductase id=4824674 bin=GWA2_Bacteroidetes_42_15 species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
AR_MS4_05142019_scaffold_6960_2
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(368..748)
-----------------
DNA (381bp)
protein (127aa)
response regulator n=1 Tax=Desulfovibrio desulfuricans RepID=UPI00037CEEF2
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACU90077.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
AR_MS4_05142019_scaffold_6960_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(753..2327)
-----------------
DNA (1575bp)
protein (525aa)
histidine kinase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B78BD2
multi-sensor signal transduction histidine kinase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_6960_4
unknown

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2429..2854
-----------------
DNA (426bp)
protein (142aa)

This feature has no annotations

AR_MS4_05142019_scaffold_6960_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2996..4429
-----------------
DNA (1434bp)
protein (478aa)
Helix-turn-helix, Fis-type n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NQN0_9DELT
putative Fis family two component sigma54 specific transcriptional regulator
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_6960_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4824..5261
-----------------
DNA (438bp)
protein (146aa)
Permease n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RF83_DESPD
permease
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_6960_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5258..6004
-----------------
DNA (747bp)
protein (249aa)
Permease n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RF83_DESPD
permease
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_6960_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6029..6256
-----------------
DNA (228bp)
protein (76aa)
Putative uncharacterized protein n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RF82_DESPD
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_6960_9
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6347..6853
-----------------
DNA (507bp)
protein (169aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P6U2_DESSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF79183.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
AR_MS4_05142019_scaffold_6960_10
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6850..8418
-----------------
DNA (1569bp)
protein (523aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
PAS domain S-box n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NBM0_DESSD
PAS domain S-box
AR_MS4_05142019_scaffold_6960_11
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8468..8854
-----------------
DNA (387bp)
protein (129aa)
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P0Z8_DESSD
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator {ECO:0000313|EMBL:AGF77203.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
AR_MS4_05142019_scaffold_6960_12
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8872..11727
-----------------
DNA (2856bp)
protein (952aa)
Anaerobic dehydrogenase, typically selenocysteine-containing n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P680_DESSD
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:AGF77202.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
anaerobic dehydrogenase, typically selenocysteine-containing
AR_MS4_05142019_scaffold_6960_13
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11774..13432
-----------------
DNA (1659bp)
protein (553aa)
PAS domain S-box n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PL42_DESSD
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AGF77201.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
AR_MS4_05142019_scaffold_6960_14
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13689..15689)
-----------------
DNA (2001bp)
protein (667aa)
Small GTP-binding protein domain n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NTD5_9DELT
small GTP-binding protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
AR_MS4_05142019_scaffold_6960_15
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15951..16949
-----------------
DNA (999bp)
protein (333aa)
Quinone oxidoreductase, YhdH/YhfP family n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5K7_DESAT
quinone oxidoreductase, YhdH/YhfP family
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_6960_16
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17087..17485
-----------------
DNA (399bp)
protein (133aa)
Ferric uptake regulator, Fur family n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5K6_DESAT
ferric uptake regulator, Fur family
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_6960_17
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17763..18338
-----------------
DNA (576bp)
protein (192aa)
Rubrerythrin n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3E9_GEODF
rubrerythrin
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
AR_MS4_05142019_scaffold_6960_18

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18358..18732
-----------------
DNA (375bp)
protein (125aa)
Desulfoferrodoxin n=1 Tax=uncultured bacterium RepID=K1YVI3_9BACT
Desulfoferrodoxin {ECO:0000313|EMBL:EKD41122.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rbo; desulfoferrodoxin
AR_MS4_05142019_scaffold_6960_19
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18800..19048
-----------------
DNA (249bp)
protein (83aa)
ferroxidase (EC:1.16.3.1)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YE39_9BACT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
AR_MS4_05142019_scaffold_6960_20
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19255..20448
-----------------
DNA (1194bp)
protein (398aa)
Flavodoxin/nitric oxide synthase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z5K3_DESAT
flavodoxin/nitric oxide synthase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_6960_21
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20460..21053
-----------------
DNA (594bp)
protein (198aa)
HEAT n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NKX2_9DELT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_6960_22
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21115..22017
-----------------
DNA (903bp)
protein (301aa)
Putative signal transduction protein n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z614_DESAT
signal transduction protein
Putative signal transduction protein {ECO:0000313|EMBL:ADH84896.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
AR_MS4_05142019_scaffold_6960_23
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22143..22607
-----------------
DNA (465bp)
protein (155aa)
Rrf2 family protein, putative transcriptional regulator n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NEL7_DESSD
rrf2 family protein, putative transcriptional regulator
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_6960_24
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22657..22905
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4L453_9DELT
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
AR_MS4_05142019_scaffold_6960_25
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22996..24525
-----------------
DNA (1530bp)
protein (510aa)
Putative cytochrome d ubiquinol oxidase, subunit I n=1 Tax=delta proteobacterium NaphS2 RepID=D8FG57_9DELT
cytochrome bd-type quinol oxidase, subunit 1
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_6960_26
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24530..25666
-----------------
DNA (1137bp)
protein (379aa)
Cytochrome d ubiquinol oxidase, subunit II id=3203477 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
cytochrome C oxidase assembly protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
AR_MS4_05142019_scaffold_6960_27
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25685..25777
-----------------
DNA (93bp)
protein (31aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
Displaying 27 items

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