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AR_MS4_05142019_scaffold_2357

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AR_MS4_05142019_scaffold_2357_1
RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..317)
-----------------
DNA (315bp)
protein (105aa)
CO dehydrogenase/acetyl-CoA synthase complex, beta subunit (EC:2.3.1.169)
CO dehydrogenase/acetyl-CoA synthase complex, beta subunit n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1V4_DESAT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_53_23_curated
AR_MS4_05142019_scaffold_2357_2
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(388..3009)
-----------------
DNA (2622bp)
protein (874aa)
Methylenetetrahydrofolate reductase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1V5_DESAT
CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
AR_MS4_05142019_scaffold_2357_3
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3051..5045)
-----------------
DNA (1995bp)
protein (665aa)
carbon-monoxide dehydrogenase, catalytic subunit (EC:1.2.99.2)
Carbon-monoxide dehydrogenase, catalytic subunit n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NVC2_9DELT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_2357_4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5129..6016)
-----------------
DNA (888bp)
protein (296aa)
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PDM3_DESSD
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_2357_5
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6303..8516)
-----------------
DNA (2214bp)
protein (738aa)
Cyclic nucleotide-binding:type II secretion system protein E:General secretory system II, protein E-like n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NVC0_9DELT
cyclic nucleotide-binding protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_2357_6
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8775..10538)
-----------------
DNA (1764bp)
protein (588aa)
Formate--tetrahydrofolate ligase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=FTHS_DESAA
formate--tetrahydrofolate ligase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_2357_7
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10637..11593)
-----------------
DNA (957bp)
protein (319aa)
Thymidylate synthase complementing protein ThyX n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1W7_DESAT
thymidylate synthase complementing protein ThyX
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_2357_8
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11618..12835)
-----------------
DNA (1218bp)
protein (406aa)
Cysteine desulfurase NifS n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P606_DESSD
cysteine desulfurase NifS
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_2357_9
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12835..13668)
-----------------
DNA (834bp)
protein (278aa)
Nitrogen fixation protein NifU n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NJG0_9DELT
Fe-S cluster assembly protein NifU
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
AR_MS4_05142019_scaffold_2357_10
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14207..16036)
-----------------
DNA (1830bp)
protein (610aa)
UvrABC system protein C n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NJH4_9DELT
excinuclease ABC, C subunit
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_2357_11
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16334..16612
-----------------
DNA (279bp)
protein (93aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZEX3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ETW94234.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
plasmid maintenance system killer protein
AR_MS4_05142019_scaffold_2357_12
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16624..16911
-----------------
DNA (288bp)
protein (96aa)
Addiction module antidote protein, HigA family n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WVU6_9NOST
addiction module antidote protein, HigA family
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_2357_13
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(17333..19900)
-----------------
DNA (2568bp)
protein (856aa)
Pyruvate phosphate dikinase PEP/pyruvate-binding protein id=2807508 bin=GWC2_Nitrospirae-rel_56_14 species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
pyruvate phosphate dikinase PEP/pyruvate-binding protein
Tax=GWC2_Nitrospirae_56_14_curated
AR_MS4_05142019_scaffold_2357_14
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(19937..20314)
-----------------
DNA (378bp)
protein (126aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains id=2807492 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfovibrio sp. U5L genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
response regulator receiver protein
Tax=GWC2_Nitrospirae_56_14_curated
AR_MS4_05142019_scaffold_2357_15
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(20301..21731)
-----------------
DNA (1431bp)
protein (477aa)
Histidine kinase,HAMP domain-containing protein,histidine kinase id=2807486 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfovibrio fructosivorans genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
integral membrane sensor signal transduction histidine kinase
Tax=GWC2_Nitrospirae_56_14_curated
AR_MS4_05142019_scaffold_2357_16
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(21728..22942)
-----------------
DNA (1215bp)
protein (405aa)
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB id=2807479 bin=GWC2_Nitrospirae-rel_56_14 species=Acidithiobacillus thiooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Tax=GWC2_Nitrospirae_56_14_curated
AR_MS4_05142019_scaffold_2357_17
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(22929..24455)
-----------------
DNA (1527bp)
protein (509aa)
Putative uncharacterized protein id=2807474 bin=GWC2_Nitrospirae-rel_56_14 species=Acidithiobacillus caldus genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=GWC2_Nitrospirae_56_14_curated
AR_MS4_05142019_scaffold_2357_18
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24957..25772)
-----------------
DNA (816bp)
protein (272aa)
4Fe-4S ferredoxin, iron-sulfur binding n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1P3_DESAC
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_2357_19
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25838..28093)
-----------------
DNA (2256bp)
protein (752aa)
nitrate reductase (EC:1.7.99.4)
Twin-arginine translocation pathway signal n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K1P2_DESAC
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
AR_MS4_05142019_scaffold_2357_20

Not on your lists

comp(28095..28661)
-----------------
DNA (567bp)
protein (189aa)
Cytoplasmic chaperone TorD n=1 Tax=uncultured bacterium RepID=K1Z890_9BACT
Cytoplasmic chaperone TorD {ECO:0000313|EMBL:EKD40673.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative component of anaerobic dehydrogenase
AR_MS4_05142019_scaffold_2357_21

Not on your lists

28862..30316
-----------------
DNA (1455bp)
protein (485aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=uncultured bacterium RepID=K1ZSN2_9BACT
integral membrane sensor signal transduction histidine kinase
AR_MS4_05142019_scaffold_2357_22

Not on your lists

30309..30845
-----------------
DNA (537bp)
protein (179aa)
Response regulator receiver n=1 Tax=uncultured bacterium RepID=K1YCT7_9BACT
Response regulator receiver {ECO:0000313|EMBL:EKD40675.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Fis family transcriptional regulator
AR_MS4_05142019_scaffold_2357_23

Not on your lists

30877..31425
-----------------
DNA (549bp)
protein (183aa)
NosL family protein id=3471225 bin=GWF2_Syntrophobacterales_56_9 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
NosL protein {ECO:0000313|EMBL:EKD40676.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NosL family protein
AR_MS4_05142019_scaffold_2357_24
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31603..33495
-----------------
DNA (1893bp)
protein (631aa)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PAR9_DESSD
ATP-dependent metalloprotease FtsH
Tax=CG_Delta_06
AR_MS4_05142019_scaffold_2357_25
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33762..35204
-----------------
DNA (1443bp)
protein (481aa)
inner membrane cytochrome H
Cytochrome c family protein id=4122882 bin=GWC2_Pelobacter_58_13 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWD2_Desulfuromonadales_61_12_curated
AR_MS4_05142019_scaffold_2357_26
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35319..35783
-----------------
DNA (465bp)
protein (155aa)
Transcriptional regulator, MerR family id=2146073 bin=GWD2_RBX1-related_39_127 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
MerR family transcriptional regulator
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
AR_MS4_05142019_scaffold_2357_27
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35752..37467)
-----------------
DNA (1716bp)
protein (572aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NQB8_DESTT
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:CCK81077.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacula toluolica (strain DSM 7467 / Tol2).;"
Displaying 27 items

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