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ar4r2_scaffold_16168

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_16168_1
Thioalkalimicrobium cyclicum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1131)
DNA (1131bp) protein (377aa)
DNA topoisomerase I (EC:5.99.1.2) rbh
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=717773 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1).;"
DNA topoisomerase 1 n=1 Tax=Thioalkalimicrobium cyclicum (strain DSM 14477 / JCM 11371 / ALM1) RepID=F6DAL7_THICA rbh
ar4r2_scaffold_16168_2
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1147..2244)
DNA (1098bp) protein (366aa)
DNA processing protein DprA n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=A5EWL6_DICNV
dprA; DNA processing protein DprA
DNA processing protein DprA {ECO:0000313|EMBL:ABQ13496.1}; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Dichelobacter.;" source="Dichelobacter nodosus (strain VCS1703A).;"
ar4r2_scaffold_16168_3
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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2327..2827
DNA (501bp) protein (167aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; Short=PDF {ECO:0000255|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000255|HAMAP-Rule:MF_00163};; Polypeptide deformylase {ECO:0000255|HAMAP-Rule:MF_00163}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Peptide deformylase n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=DEF_THICR
ar4r2_scaffold_16168_4
Serratia odorifera, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2827..3759
DNA (933bp) protein (311aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=667129 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia odorifera DSM 4582.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
UPI0003A8A3E8 related cluster n=1 Tax=unknown RepID=UPI0003A8A3E8 rbh
ar4r2_scaffold_16168_5
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3759..5072
DNA (1314bp) protein (438aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira crunogena (strain XCL-2).;"
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31J86_THICR rbh
sun protein rbh
ar4r2_scaffold_16168_6
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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5076..5630
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=A5EWK4_DICNV
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ar4r2_scaffold_16168_7
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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5627..5959
DNA (333bp) protein (111aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI00036D8ACE
integral membrane sensor signal transduction histidine kinase
Displaying 7 items

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