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ar4r2_scaffold_4643

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ar4r2_scaffold_4643_1
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..629
DNA (627bp) protein (209aa)
Transposase mutator type n=4 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DD10_9GAMM rbh
transposase
Transposase {ECO:0000313|EMBL:AHF00853.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_4643_2
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(726..1322)
DNA (597bp) protein (199aa)
Rhodanese domain protein n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=B3QKZ9_CHLP8
Rhodanese domain-containing protein
Tax=BJP_IG2102_Gammaproteobacteria_62_140
ar4r2_scaffold_4643_3
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1424..2959)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Thiomicrospira halophila RepID=UPI00036050DD rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
integral membrane protein MviN rbh
ar4r2_scaffold_4643_4
Candidatus Sulfuricurvum sp. RIFRC-1, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(3040..3234)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=uncultured Sulfuricurvum sp. RIFRC-1 RepID=K7S7S2_9HELI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV96695.1}; TaxID=1249480 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Candidatus Sulfuricurvum sp. RIFRC-1.;"
ar4r2_scaffold_4643_5
Hydrogenovibrio marinus, Hydrogenovibrio, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3294..4427)
DNA (1134bp) protein (378aa)
tRNA/tmRNA (uracil-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; EC=2.1.1.35 {ECO:0000256|HAMAP-Rule:MF_01011};; tRNA (uracil(54)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; tRNA(m5U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; tmRNA (uracil(341)-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011}; TaxID=28885 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Hydrogenovibrio.;" source="Hydrogenovibrio marinus.;"
tRNA/tmRNA (uracil-C(5))-methyltransferase n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) RepID=F2JZD0_MARM1
tRNA (uracil-5-)-methyltransferase
ar4r2_scaffold_4643_6
GWA2_Gallionellales_60_142_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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4463..5641
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QX69_9ZZZZ rbh
major facilitator superfamily MFS_1 rbh
Tax=GWA2_Gallionellales_60_142_curated
ar4r2_scaffold_4643_7
CG_Thiomicrospira_01, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5823..6110)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Thiomicrospira arctica RepID=UPI0003652F91
rhodanese-like protein
Tax=CG_Thiomicrospira_01
ar4r2_scaffold_4643_8
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6157..6630)
DNA (474bp) protein (158aa)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162, ECO:0000313|EMBL:CBY80986.1}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=866630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae F3031.;"
Phosphatidylglycerophosphatase A n=1 Tax=Haemophilus influenzae F3031 RepID=E7A4K8_HAEIF
phosphatidylglycerophosphatase a
ar4r2_scaffold_4643_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6614..7849)
DNA (1236bp) protein (412aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
argininosuccinate synthase (EC:6.3.4.5) rbh
argininosuccinate synthase n=1 Tax=Thiothrix flexilis RepID=UPI0003681E15 rbh
ar4r2_scaffold_4643_10
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7974..8900
DNA (927bp) protein (309aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DB75_9GAMM rbh
phosphatidylserine decarboxylase subunit beta
ar4r2_scaffold_4643_11
Thioalkalimicrobium aerophilum, Thioalkalimicrobium, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8934..9272
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DB76_9GAMM
nitrogen regulatory protein P-II 1
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:AHF01349.1}; TaxID=717772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thioalkalimicrobium.;" source="Thioalkalimicrobium aerophilum AL3.;"
ar4r2_scaffold_4643_12
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9368..10051)
DNA (684bp) protein (228aa)
DNA photolyase FAD-binding n=1 Tax=Thiocapsa marina 5811 RepID=F9UGI0_9GAMM
DNA photolyase FAD-binding {ECO:0000313|EMBL:EGV16663.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
FAD binding domain of DNA photolyase family protein
Displaying 12 items

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