ggKbase home page

S4JAR1_25

Alias: S4JAR1_137

Search features with annotation key words

Displaying 8 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4JAR1_25_1
Ferroplasma acidarmanus, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

3..1013
DNA (1011bp) protein (337aa)
amidinotransferase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E3FD (db=UNIREF evalue=2.0e-114 bit_score=416.0 identity=59.05 coverage=99.406528189911)
hypothetical protein
hypothetical protein
Pentein (db=superfamily db_id=SSF55909 from=17 to=336 evalue=2.2e-51)
S4JAR1_25_2
Defluviitoga tunisiensis, Defluviitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(1021..1950)
DNA (930bp) protein (310aa)
arcC; carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CS31_METMJ (db=UNIREF evalue=8.0e-70 bit_score=267.0 identity=47.73 coverage=98.3870967741936)
seg (db=Seg db_id=seg from=188 to=195)
seg (db=Seg db_id=seg from=292 to=303)
S4JAR1_25_3
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

Not on your lists

2189..2350
DNA (162bp) protein (54aa)
2189..2350 + (rbs_motif=GGTG rbs_spacer=6bp)
id=4330689 Tax=RIFOXYC2_FULL_RIF01_39_67_curated
S4JAR1_25_4
unknown

Not on your lists

comp(2685..3143)
DNA (459bp) protein (153aa)
HISTIDINE TRIAD (HIT) PROTEIN (db=HMMPanther db_id=PTHR23089 from=46 to=120 evalue=1.3e-07 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
HIT-like (db=superfamily db_id=SSF54197 from=13 to=145 evalue=2.5e-18 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
HIT (db=HMMPfam db_id=PF01230 from=25 to=113 evalue=4.1e-11 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
no description (db=Gene3D db_id=G3DSA:3.30.428.10 from=12 to=120 evalue=5.8e-09 interpro_id=IPR011151 interpro_description=Histidine triad motif GO=Molecular Function: catalytic activity (GO:0003824))
S4JAR1_25_5
unknown

Not on your lists

comp(3248..3616)
DNA (369bp) protein (123aa)
3248..3616 - (rbs_motif=GGTG rbs_spacer=5bp)
S4JAR1_25_6
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

comp(3747..5048)
DNA (1302bp) protein (434aa)
ndvB; beta-(1-3)-glucosyl transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=356 to=374)
seg (db=Seg db_id=seg from=331 to=343)
transmembrane_regions (db=TMHMM db_id=tmhmm from=324 to=346)
S4JAR1_25_7
unknown

Not on your lists

5242..5376
DNA (135bp) protein (45aa)
5242..5376 + (rbs_motif=GGTG rbs_spacer=5bp)
S4JAR1_25_8
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

5412..5732
DNA (321bp) protein (107aa)
Uroporphyrinogen decarboxylase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH18_9EURY (db=UNIREF evalue=2.0e-30 bit_score=134.0 identity=61.54 coverage=94.392523364486)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
UROPORPHYRINOGEN DECARBOXYLASE (db=HMMPanther db_id=PTHR21091:SF2 from=1 to=105 evalue=7.2e-27 interpro_id=IPR006361 interpro_description=Uroporphyrinogen decarboxylase HemE GO=Molecular Function: uroporphyrinogen decarboxylase activity (GO:0004853), Biological Process: porphyrin biosynthetic process (GO:0006779))
METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR21091 from=1 to=105 evalue=7.2e-27)
Displaying 8 items

View Taxonomy