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S4JAR1_28

Alias: S4JAR1_122

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Displaying items 1-30 of 60 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4JAR1_28_1
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(2..640)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIK2_9EURY (db=UNIREF evalue=9.0e-48 bit_score=192.0 identity=59.15 coverage=99.5305164319249)
seg (db=Seg db_id=seg from=175 to=184)
seg (db=Seg db_id=seg from=115 to=129)
seg (db=Seg db_id=seg from=26 to=48)
S4JAR1_28_2
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(667..1641)
DNA (975bp) protein (325aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI32_9EURY (db=UNIREF evalue=4.0e-26 bit_score=122.0 identity=26.1 coverage=89.8461538461538)
seg (db=Seg db_id=seg from=18 to=29)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=156 to=218 evalue=8.3e-09)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=158 to=209 evalue=3.6e-07 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
S4JAR1_28_3
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

comp(1642..2862)
DNA (1221bp) protein (407aa)
cysN; sulfate adenylyltransferase subunit 1 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 n=2 Tax=Clostridia RepID=A4XJZ8_CALS8 (db=UNIREF evalue=3.0e-60 bit_score=236.0 identity=34.89 coverage=97.2972972972973)
EUKARYOTIC RELEASE FACTOR 3-RELATED (ERFS) (HBS1-LIKE) (db=HMMPanther db_id=PTHR23115:SF38 from=5 to=288 evalue=1.3e-62)
TRANSLATION FACTOR (db=HMMPanther db_id=PTHR23115 from=5 to=288 evalue=1.3e-62)
S4JAR1_28_4
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

comp(2872..3660)
DNA (789bp) protein (263aa)
Sulfate adenylyltransferase subunit 2
Sulfate adenylyltransferase subunit 2
Sulfate adenylyltransferase subunit 2 n=2 Tax=Clostridia RepID=A4XJZ7_CALS8 (db=UNIREF evalue=8.0e-84 bit_score=313.0 identity=56.82 coverage=97.7186311787072)
Adenine nucleotide alpha hydrolases-like (db=superfamily db_id=SSF52402 from=3 to=199 evalue=3.9e-57)
S4JAR1_28_5
Thermoplasmatales archaeon A-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(4019..5821)
DNA (1803bp) protein (601aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IE82_ACIB4 (db=UNIREF evalue=2.0e-12 bit_score=78.2 identity=40.2 coverage=15.973377703827)
seg (db=Seg db_id=seg from=574 to=585)
Uncharacterized protein {ECO:0000313|EMBL:EQB71378.1}; TaxID=667135 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon A-pl
S4JAR1_28_6
Caldisphaera lagunensis, Caldisphaera, Acidilobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

5988..6638
DNA (651bp) protein (217aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
transmembrane_regions (db=TMHMM db_id=tmhmm from=189 to=211)
seg (db=Seg db_id=seg from=135 to=189)
seg (db=Seg db_id=seg from=192 to=215)
S4JAR1_28_7
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(6675..7829)
DNA (1155bp) protein (385aa)
Polyprenyl synthetase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH89_9EURY (db=UNIREF evalue=2.0e-45 bit_score=186.0 identity=36.72 coverage=77.4025974025974)
polyprenyl synthetase
POLYPRENYL_SYNTHASE_1 (db=PatternScan db_id=PS00723 from=132 to=146 evalue=0.0 interpro_id=IPR000092 interpro_description=Polyprenyl synthetase GO=Biological Process: isoprenoid biosynthetic process (GO:0008299))
Terpenoid synthases (db=superfamily db_id=SSF48576 from=44 to=383 evalue=6.2e-60 interpro_id=IPR008949 interpro_description=Terpenoid synthase)
S4JAR1_28_8
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(7910..8695)
DNA (786bp) protein (262aa)
ABC transporter permease protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIK0_9EURY (db=UNIREF evalue=2.0e-65 bit_score=252.0 identity=62.36 coverage=98.8549618320611)
hypothetical protein
seg (db=Seg db_id=seg from=205 to=224)
seg (db=Seg db_id=seg from=172 to=196)
S4JAR1_28_9
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(8682..9593)
DNA (912bp) protein (304aa)
ABC transporter n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIK1_9EURY (db=UNIREF evalue=3.0e-79 bit_score=298.0 identity=50.5 coverage=96.7105263157895)
ABC transporter ATPase
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=5 to=292 evalue=3.0e-77)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=7 to=212 evalue=9.8e-59)
S4JAR1_28_10
Metallosphaera cuprina, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(9595..10479)
DNA (885bp) protein (295aa)
ribose-phosphate pyrophosphokinase
Ribose-phosphate pyrophosphokinase n=1 Tax=Sulfolobus tokodaii RepID=KPRS_SULTO (db=UNIREF evalue=3.0e-44 bit_score=182.0 identity=36.84 coverage=94.9152542372881)
seg (db=Seg db_id=seg from=70 to=82)
seg (db=Seg db_id=seg from=231 to=244)
S4JAR1_28_11
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

10665..11408
DNA (744bp) protein (248aa)
DNA polymerase sliding clamp n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIE4_9EURY (db=UNIREF evalue=1.0e-103 bit_score=379.0 identity=77.33 coverage=99.1935483870968)
proliferating cell nuclear antigen
coiled-coil (db=Coil db_id=coil from=171 to=192 evalue=NA)
seg (db=Seg db_id=seg from=116 to=128)
S4JAR1_28_12
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

11417..12295
DNA (879bp) protein (293aa)
MscS Mechanosensitive ion channel n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIE3_9EURY (db=UNIREF evalue=3.0e-50 bit_score=202.0 identity=44.49 coverage=78.1569965870307)
mechanosensitive ion channel protein MscS
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=94)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
S4JAR1_28_13

Not on your lists

12298..12708
DNA (411bp) protein (137aa)
Threonyl-tRNA synthetase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIE2_9EURY (db=UNIREF evalue=9.0e-38 bit_score=159.0 identity=55.56 coverage=97.0802919708029)
threonyl-tRNA synthetase
tRNA-Thr_ED (db=HMMPfam db_id=PF08915 from=1 to=136 evalue=2.4e-25 interpro_id=IPR015011 interpro_description=Threonyl-tRNA synthetase, editing domain, archaea GO=Molecular Function: threonine-tRNA ligase activity (GO:0004829), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Molecular Function: zinc ion binding (GO:0008270))
SYT_METKA_Q8TXW5; (db=BlastProDom db_id=PD016189 from=1 to=135 evalue=3.0e-16 interpro_id=IPR015011 interpro_description=Threonyl-tRNA synthetase, editing domain, archaea GO=Molecular Function: threonine-tRNA ligase activity (GO:0004829), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Molecular Function: zinc ion binding (GO:0008270))
S4JAR1_28_14

Not on your lists

12763..13284
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIE1_9EURY (db=UNIREF evalue=7.0e-39 bit_score=162.0 identity=47.5 coverage=91.3793103448276)
ThiJ/PfpI (db=KEGG evalue=6.0e-11 bit_score=70.1 identity=27.15 coverage=85.632183908046)
seg (db=Seg db_id=seg from=161 to=170)
Class I glutamine amidotransferase-like (db=superfamily db_id=SSF52317 from=1 to=160 evalue=8.0e-14)
S4JAR1_28_15
Thermoplasmatales archaeon BRNA1, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

13289..13606
DNA (318bp) protein (106aa)
RNase P subunit RPR2 (EC:3.1.26.5)
Rpr2 (db=HMMPfam db_id=PF04032 from=18 to=97 evalue=1.5e-16 interpro_id=IPR007175 interpro_description=RNAse P, Rpr2/Rpp21 subunit)
Ribonuclease P, protein component 4 (db=HMMPIR db_id=PIRSF004878 from=1 to=105 evalue=1.3e-14 interpro_id=IPR016432 interpro_description=Ribonuclease P, protein component 4 GO=Biological Process: tRNA 5'-leader removal (GO:0001682), Molecular Function: ribonuclease P activity (GO:0004526))
RIBONUCLEASE P SUBUNIT (db=HMMPanther db_id=PTHR14742 from=35 to=96 evalue=1.3e-07 interpro_id=IPR007175 interpro_description=RNAse P, Rpr2/Rpp21 subunit)
S4JAR1_28_16
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

13631..14320
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DID9_9EURY (db=UNIREF evalue=2.0e-79 bit_score=298.0 identity=72.49 coverage=99.1304347826087)
hypothetical protein
seg (db=Seg db_id=seg from=29 to=38)
seg (db=Seg db_id=seg from=117 to=130)
S4JAR1_28_17
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(14326..15318)
DNA (993bp) protein (331aa)
Radical SAM domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DID8_9EURY (db=UNIREF evalue=4.0e-146 bit_score=521.0 identity=76.1 coverage=95.7703927492447)
Fe-S oxidoreductase
Fe-S oxidoreductase
RSAFD1-RELATED (db=HMMPanther db_id=PTHR13930 from=1 to=317 evalue=3.0e-79)
S4JAR1_28_18

Not on your lists

comp(15456..15635)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGP9_9EURY (db=UNIREF evalue=3.0e-15 bit_score=84.3 identity=69.49 coverage=96.6666666666667)
DUF1059 (db=HMMPfam db_id=PF06348 from=3 to=58 evalue=8.7e-22 interpro_id=IPR009409 interpro_description=Protein of unknown function DUF1059)
Protein containing DUF1059 {ECO:0000313|EMBL:EQD78619.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
S4JAR1_28_19
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15700..16092)
DNA (393bp) protein (131aa)
HIT family hydrolase, diadenosine tetraphosphate hydrolase
HISTIDINE TRIAD (HIT) PROTEIN (db=HMMPanther db_id=PTHR23089 from=16 to=120 evalue=3.2e-22 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
HIT_1 (db=PatternScan db_id=PS00892 from=83 to=101 evalue=0.0 interpro_id=IPR019808 interpro_description=Histidine triad, conserved site)
HIT-like (db=superfamily db_id=SSF54197 from=2 to=128 evalue=5.2e-36 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
S4JAR1_28_20
unknown

Not on your lists

comp(16094..16621)
DNA (528bp) protein (176aa)
16094..16621 - (rbs_motif=GTG rbs_spacer=5bp)
S4JAR1_28_21
unknown

Not on your lists

16727..17521
DNA (795bp) protein (265aa)
16727..17521 + (rbs_motif=GGT rbs_spacer=8bp)
S4JAR1_28_22
unknown

Not on your lists

comp(17525..18832)
DNA (1308bp) protein (436aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=6 to=25)
S4JAR1_28_23

Not on your lists

18898..19635
DNA (738bp) protein (246aa)
Ion transport 2 domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHQ8_9EURY (db=UNIREF evalue=1.0e-53 bit_score=213.0 identity=46.06 coverage=96.3414634146341)
Ion transport 2 domain-containing protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=63)
S4JAR1_28_24
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(19636..21267)
DNA (1632bp) protein (544aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGR6_9EURY (db=UNIREF evalue=8.0e-53 bit_score=212.0 identity=39.06 coverage=59.9264705882353)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=203 to=217)
seg (db=Seg db_id=seg from=387 to=407)
S4JAR1_28_25

Not on your lists

21291..21563
DNA (273bp) protein (91aa)
acylphosphatase
Acylphosphatase n=1 Tax=Archaeoglobus fulgidus RepID=ACYP_ARCFU (db=UNIREF evalue=9.0e-11 bit_score=69.3 identity=36.96 coverage=95.6043956043956)
Acylphosphatase (db=HMMPfam db_id=PF00708 from=3 to=89 evalue=1.8e-24 interpro_id=IPR001792 interpro_description=Acylphosphatase-like)
Acylphosphatase/BLUF domain-like (db=superfamily db_id=SSF54975 from=1 to=90 evalue=8.8e-23 interpro_id=IPR001792 interpro_description=Acylphosphatase-like)
S4JAR1_28_26
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

comp(21564..21977)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL0_9EURY (db=UNIREF evalue=3.0e-24 bit_score=114.0 identity=42.61 coverage=82.6086956521739)
seg (db=Seg db_id=seg from=123 to=134)
Putative uncharacterized protein {ECO:0000313|EMBL:EET89784.1}; TaxID=425595 species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
S4JAR1_28_27
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

22068..22535
DNA (468bp) protein (156aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL1_9EURY (db=UNIREF evalue=4.0e-50 bit_score=199.0 identity=74.59 coverage=77.5641025641026)
Putative uncharacterized protein {ECO:0000313|EMBL:EET89785.1}; TaxID=425595 species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
hypothetical protein
S4JAR1_28_28
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

22552..24267
DNA (1716bp) protein (572aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL2_9EURY (db=UNIREF evalue=3.0e-65 bit_score=253.0 identity=31.41 coverage=97.9020979020979)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=13 to=27)
CARDB (db=HMMPfam db_id=PF07705 from=46 to=121 evalue=1.5e-07 interpro_id=IPR011635 interpro_description=APHP)
S4JAR1_28_29

Not on your lists

comp(24276..24536)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL3_9EURY (db=UNIREF evalue=2.0e-20 bit_score=101.0 identity=53.49 coverage=97.7011494252874)
Uncharacterized protein {ECO:0000313|EMBL:EQD43399.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
S4JAR1_28_30
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

Not on your lists

24691..25737
DNA (1047bp) protein (349aa)
NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIL4_9EURY (db=UNIREF evalue=2.0e-105 bit_score=385.0 identity=64.33 coverage=97.7077363896848)
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5)
seg (db=Seg db_id=seg from=272 to=283)
seg (db=Seg db_id=seg from=182 to=195)
Displaying items 1-30 of 60 in total

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