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S4JAR1_29

Alias: S4JAR1_65

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S4JAR1_29_1
uncultured euryarchaeote, Euryarchaeota, Archaea

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comp(2..133)
DNA (132bp) protein (44aa)
2..133 - (rbs_motif=GGTG rbs_spacer=5bp)
tRNA splicing endonuclease {ECO:0000313|EMBL:AEM63745.1}; TaxID=114243 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured euryarchaeote.;"
S4JAR1_29_2

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comp(136..897)
DNA (762bp) protein (254aa)
Diphthine synthase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIA4_9EURY (db=UNIREF evalue=6.0e-55 bit_score=217.0 identity=43.9 coverage=96.0629921259843)
diphthine synthase
dph5: diphthine synthase (db=HMMTigr db_id=TIGR00522 from=1 to=253 evalue=8.7e-44 interpro_id=IPR004551 interpro_description=Diphthine synthase GO=Molecular Function: diphthine synthase activity (GO:0004164), Biological Process: peptidyl-diphthamide biosynthetic process from peptidyl-histidine (GO:0017183))
Tetrapyrrole methylase (db=superfamily db_id=SSF53790 from=1 to=252 evalue=1.3e-37 interpro_id=IPR000878 interpro_description=Tetrapyrrole methylase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
S4JAR1_29_3
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(905..3658)
DNA (2754bp) protein (918aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIA3_9EURY (db=UNIREF evalue=0.0 bit_score=937.0 identity=52.12 coverage=99.7821350762527)
DEAD/DEAH box helicase
DEAD/DEAH box helicase
seg (db=Seg db_id=seg from=157 to=168)
S4JAR1_29_4

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comp(3666..4889)
DNA (1224bp) protein (408aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIA2_9EURY (db=UNIREF evalue=5.0e-44 bit_score=182.0 identity=34.56 coverage=92.156862745098)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=377 to=399)
seg (db=Seg db_id=seg from=380 to=393)
S4JAR1_29_5

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comp(4886..5074)
DNA (189bp) protein (63aa)
seg (db=Seg db_id=seg from=21 to=33)
Uncharacterized protein {ECO:0000313|EMBL:EQD39677.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
S4JAR1_29_6
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(5341..5649)
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIA2_9EURY (db=UNIREF evalue=3.0e-19 bit_score=97.4 identity=65.22 coverage=66.0194174757282)
seg (db=Seg db_id=seg from=6 to=19)
seg (db=Seg db_id=seg from=89 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
S4JAR1_29_7

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comp(5636..6385)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIA1_9EURY (db=UNIREF evalue=3.0e-46 bit_score=188.0 identity=51.09 coverage=72.0)
hypothetical protein
seg (db=Seg db_id=seg from=57 to=67)
tRNA_deacylase (db=HMMPfam db_id=PF04414 from=48 to=247 evalue=1.6e-51 interpro_id=IPR007508 interpro_description=D-aminoacyl-tRNA deacylase)
S4JAR1_29_8
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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6442..6744
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIA0_9EURY (db=UNIREF evalue=1.0e-25 bit_score=118.0 identity=63.33 coverage=88.1188118811881)
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EET89674.1}; TaxID=425595 species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
S4JAR1_29_9
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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6807..7166
DNA (360bp) protein (120aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 3 n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI99_9EURY (db=UNIREF evalue=1.0e-26 bit_score=121.0 identity=50.0 coverage=95.8333333333333)
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=82)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=92 to=114)
S4JAR1_29_10

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7156..7782
DNA (627bp) protein (209aa)
NADH-quinone oxidoreductase, B subunit n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI98_9EURY (db=UNIREF evalue=3.0e-89 bit_score=330.0 identity=73.76 coverage=96.1722488038278)
NADH dehydrogenase subunit B (EC:1.6.5.3)
NADH-PLASTOQUINONE OXIDOREDUCTASE (db=HMMPanther db_id=PTHR11995:SF2 from=42 to=208 evalue=2.8e-64 interpro_id=IPR006138 interpro_description=NADH:ubiquinone oxidoreductase, 20kDa subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
NADH DEHYDROGENASE (db=HMMPanther db_id=PTHR11995 from=42 to=208 evalue=2.8e-64 interpro_id=IPR014406 interpro_description=[NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
S4JAR1_29_11

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7721..8092
DNA (372bp) protein (124aa)
NADH (or F420H2) dehydrogenase subunit C
Complex1_30kDa (db=HMMPfam db_id=PF00329 from=12 to=109 evalue=1.3e-22 interpro_id=IPR001268 interpro_description=NADH:ubiquinone oxidoreductase, 30kDa subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Biological Process: oxidation reduction (GO:0055114))
Nqo5-like (db=superfamily db_id=SSF143243 from=1 to=120 evalue=7.3e-22)
NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT C (db=HMMPanther db_id=PTHR10884:SF6 from=20 to=115 evalue=6.2e-13)
S4JAR1_29_12

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8089..8619
DNA (531bp) protein (177aa)
NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI97_9EURY (db=UNIREF evalue=2.0e-68 bit_score=261.0 identity=75.57 coverage=98.8700564971751)
NADH dehydrogenase I subunit D (EC:1.6.99.5)
seg (db=Seg db_id=seg from=17 to=33)
COMPLEX1_49K (db=PatternScan db_id=PS00535 from=40 to=51 evalue=0.0 interpro_id=IPR014029 interpro_description=NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site)
S4JAR1_29_13
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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8646..9188
DNA (543bp) protein (181aa)
NADH dehydrogenase (Quinone) n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI97_9EURY (db=UNIREF evalue=7.0e-66 bit_score=252.0 identity=63.89 coverage=98.8950276243094)
NADH dehydrogenase I subunit D (EC:1.6.99.5)
NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT (db=HMMPanther db_id=PTHR11993 from=1 to=180 evalue=1.1e-59)
HydB/Nqo4-like (db=superfamily db_id=SSF56762 from=1 to=180 evalue=2.3e-43)
S4JAR1_29_14
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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9270..9611
DNA (342bp) protein (114aa)
Prefoldin beta-domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI96_9EURY (db=UNIREF evalue=6.0e-19 bit_score=96.3 identity=46.67 coverage=78.0701754385965)
hypothetical protein
seg (db=Seg db_id=seg from=91 to=102)
coiled-coil (db=Coil db_id=coil from=82 to=110 evalue=NA)
S4JAR1_29_15

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9608..10591
DNA (984bp) protein (328aa)
Phosphoesterase RecJ domain protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI95_9EURY (db=UNIREF evalue=2.0e-63 bit_score=246.0 identity=44.69 coverage=93.9024390243902)
hypothetical protein
seg (db=Seg db_id=seg from=236 to=251)
DHH phosphoesterases (db=superfamily db_id=SSF64182 from=19 to=318 evalue=3.7e-38)
S4JAR1_29_16
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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10588..11796
DNA (1209bp) protein (403aa)
Metallophosphoesterase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI94_9EURY (db=UNIREF evalue=2.0e-111 bit_score=406.0 identity=54.98 coverage=98.7593052109181)
hypothetical protein
seg (db=Seg db_id=seg from=20 to=35)
seg (db=Seg db_id=seg from=107 to=116)
S4JAR1_29_17

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comp(11797..12036)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI93_9EURY (db=UNIREF evalue=1.0e-23 bit_score=112.0 identity=72.22 coverage=88.75)
Uncharacterized protein {ECO:0000313|EMBL:EQD43513.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
S4JAR1_29_18
unknown

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comp(12101..12187)
DNA (87bp) protein (29aa)
12101..12187 - (rbs_motif=None rbs_spacer=None)
Displaying 18 items

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