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AMDSBA1_4

Alias: AMDSBA1_C3

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Displaying items 91-120 of 125 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_4_91
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

97144..97368
DNA (225bp) protein (75aa)
hypothetical protein
Putative uncharacterized protein n=53 Tax=Brucella RepID=C0G9J1_9RHIZ (db=UNIREF evalue=1.9e-09 bit_score=67.0 identity=45.7 coverage=92.0)
(db=HMMPfam db_id=PF10006 from=4 to=69 evalue=1.3e-10 interpro_id=IPR018720 interpro_description=Domain of unknown function DUF2249)
Uncharacterized protein {ECO:0000313|EMBL:AEJ41211.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA1_4_92
unknown

Not on your lists

97710..98252
DNA (543bp) protein (181aa)
seg (db=Seg db_id=seg from=79 to=97)
AMDSBA1_4_93
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

98728..99903
DNA (1176bp) protein (392aa)
sodium/hydrogen exchanger
Uncharacterized protein n=1 Tax=Danaus plexippus RepID=G6CQR7_DANPL (db=UNIREF evalue=7.2e-07 bit_score=60.8 identity=22.9 coverage=98.46938775510205)
transmembrane_regions (db=TMHMM db_id=tmhmm from=290 to=312)
transmembrane_regions (db=TMHMM db_id=tmhmm from=325 to=347)
AMDSBA1_4_94
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99866..101647)
DNA (1782bp) protein (594aa)
TrkA-C domain-containing protein
TrkA-C domain-containing protein
Potassium uptake protein, Trk family n=2 Tax=Prevotella RepID=D3IMB4_9BACT (db=UNIREF evalue=1.1e-59 bit_score=236.9 identity=25.6 coverage=98.82154882154882)
seg (db=Seg db_id=seg from=507 to=521)
AMDSBA1_4_95
unknown

Not on your lists

comp(102273..103208)
DNA (936bp) protein (312aa)
102273..103208 - ( gc_cont=0.532)
AMDSBA1_4_96
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(103192..103359)
DNA (168bp) protein (56aa)
Integrase catalytic region n=6 Tax=Sulfobacillus acidophilus RepID=G8U104_9FIRM (db=UNIREF evalue=2.4e-09 bit_score=66.2 identity=56.4 coverage=94.64285714285714)
transposase IS3/IS911 family protein
Uncharacterized protein n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8U105_SULAD
Uncharacterized protein {ECO:0000313|EMBL:AEW06549.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
AMDSBA1_4_97
unknown

Not on your lists

comp(103508..104071)
DNA (564bp) protein (188aa)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=60 evalue=4.6e-09 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=1 to=62 evalue=1.8e-07 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF01381 from=6 to=53 evalue=1.7e-05 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=HMMSmart db_id=SM00530 from=5 to=59 evalue=0.0066 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA1_4_98
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

104586..105485
DNA (900bp) protein (300aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Bacillus coagulans RepID=G2TNQ5_BACCO (db=UNIREF evalue=6.3e-27 bit_score=127.1 identity=34.8 coverage=75.33333333333333)
seg (db=Seg db_id=seg from=47 to=72)
seg (db=Seg db_id=seg from=15 to=33)
AMDSBA1_4_99
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(105643..106539)
DNA (897bp) protein (299aa)
hypothetical protein
Putative uncharacterized protein n=26 Tax=Bacillus cereus group RepID=C2R3A8_BACCE (db=UNIREF evalue=1.4e-31 bit_score=142.5 identity=35.9 coverage=75.58528428093646)
seg (db=Seg db_id=seg from=66 to=78)
seg (db=Seg db_id=seg from=21 to=32)
AMDSBA1_4_100
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(106551..108440)
DNA (1890bp) protein (630aa)
Asparagine synthetase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U2W9_9PROT (db=UNIREF evalue=2.3e-71 bit_score=275.8 identity=32.7 coverage=90.63492063492063)
N-terminal nucleophile aminohydrolases (Ntn hydrolases) (db=superfamily db_id=SSF56235 from=1 to=224 evalue=3.6e-77)
asn_synth_AEB: asparagine synthase (glu (db=HMMTigr db_id=TIGR01536 from=2 to=550 evalue=5.8e-198 interpro_id=IPR006426 interpro_description=Asparagine synthase, glutamine-hydrolyzing GO=Molecular Function: asparagine synthase (glutamine-hydrolyzing) activity (GO:0004066), Biological Process: asparagine biosynthetic process (GO:0006529))
ASPARAGINE SYNTHETASE (db=HMMPanther db_id=PTHR11772 from=72 to=571 evalue=2.8e-92)
AMDSBA1_4_101
unknown

Not on your lists

comp(109160..109447)
DNA (288bp) protein (96aa)
109160..109447 - ( gc_cont=0.500)
AMDSBA1_4_102
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109978..110340)
DNA (363bp) protein (121aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YE88_9ACTO (db=UNIREF evalue=1.1e-14 bit_score=85.1 identity=42.0 coverage=89.25619834710744)
(db=HMMPfam db_id=PF04343 from=8 to=113 evalue=1.6e-19 interpro_id=IPR007438 interpro_description=Protein of unknown function DUF488)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YUZ8_NOCFA
AMDSBA1_4_103
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(110858..111355)
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=7 Tax=Geobacillus RepID=B4BIL8_9BACI (db=UNIREF evalue=8.6e-10 bit_score=69.3 identity=52.2 coverage=39.75903614457831)
SirA-like (db=superfamily db_id=SSF64307 from=87 to=165 evalue=3.9e-10 interpro_id=IPR001455 interpro_description=TusA-like domain)
(db=HMMPfam db_id=PF10006 from=98 to=161 evalue=7.2e-07 interpro_id=IPR018720 interpro_description=Domain of unknown function DUF2249)
universal stress protein
AMDSBA1_4_104
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

111731..113032
DNA (1302bp) protein (434aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TSQ2_9FIRM (db=UNIREF evalue=5.8e-74 bit_score=283.9 identity=41.8 coverage=88.47926267281106)
seg (db=Seg db_id=seg from=366 to=380)
seg (db=Seg db_id=seg from=293 to=308)
AMDSBA1_4_105
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

113025..114356
DNA (1332bp) protein (444aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8ICB7_SULAT (db=UNIREF evalue=1.0e-62 bit_score=246.5 identity=37.9 coverage=91.8918918918919)
seg (db=Seg db_id=seg from=301 to=312)
seg (db=Seg db_id=seg from=194 to=210)
AMDSBA1_4_106
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114451..115338)
DNA (888bp) protein (296aa)
lipoyl synthase (EC:2.8.1.8)
lipoyl synthase (EC:2.8.1.8)
Lipoyl synthase n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=LIPA_ANADF (db=UNIREF evalue=2.3e-74 bit_score=284.6 identity=52.0 coverage=93.24324324324324)
Lipoyl synthase (db=HMMPIR db_id=PIRSF005963 from=2 to=294 evalue=8.9e-167 interpro_id=IPR003698 interpro_description=Lipoate synthase GO=Biological Process: lipoate biosynthetic process (GO:0009107), Molecular Function: lipoate synthase activity (GO:0016992), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
AMDSBA1_4_107
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(115679..117025)
DNA (1347bp) protein (449aa)
hypothetical protein
Putative transmembrane protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=E4M4C9_9FIRM (db=UNIREF evalue=2.0e-45 bit_score=189.1 identity=43.3 coverage=55.01113585746103)
transmembrane_regions (db=TMHMM db_id=tmhmm from=291 to=310)
transmembrane_regions (db=TMHMM db_id=tmhmm from=325 to=347)
AMDSBA1_4_108
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

117715..118155
DNA (441bp) protein (147aa)
Dehydratase n=2 Tax=Azospirillum brasilense RepID=B5ANZ5_AZOBR (db=UNIREF evalue=4.1e-24 bit_score=116.7 identity=42.3 coverage=95.23809523809523)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=67)
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=1 to=145 evalue=2.1e-35)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=1 to=143 evalue=2.5e-32)
AMDSBA1_4_109
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(118767..119717)
DNA (951bp) protein (317aa)
cysK; cysteine synthase A
Uncharacterized protein n=1 Tax=Pristionchus pacificus RepID=H3EHG6_PRIPA (db=UNIREF evalue=2.4e-21 bit_score=108.6 identity=37.6 coverage=56.46687697160884)
seg (db=Seg db_id=seg from=181 to=194)
CYS_SYNTHASE (db=PatternScan db_id=PS00901 from=40 to=58 evalue=0.0 interpro_id=IPR001216 interpro_description=Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site GO=Biological Process: cysteine biosynthetic process from serine (GO:0006535))
AMDSBA1_4_110
unknown

Not on your lists

119951..120316
DNA (366bp) protein (122aa)
119951..120316 + ( gc_cont=0.503)
AMDSBA1_4_111
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(120565..121278)
DNA (714bp) protein (238aa)
type 11 methyltransferase
Methyltransferase type 11 n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UKL6_9CYAN (db=UNIREF evalue=8.0e-09 bit_score=66.6 identity=40.4 coverage=39.91596638655462)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=180 evalue=2.4e-35)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=3 to=178 evalue=7.2e-29)
AMDSBA1_4_112
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(121326..122462)
DNA (1137bp) protein (379aa)
Cysteine desulfurase (EC:2.8.1.7)
Possible cysteine desulfurase n=1 Tax=Corynebacterium striatum ATCC 6940 RepID=C2CL77_CORST (db=UNIREF evalue=2.0e-46 bit_score=192.2 identity=36.6 coverage=96.30606860158312)
seg (db=Seg db_id=seg from=38 to=46)
AA_TRANSFER_CLASS_5 (db=PatternScan db_id=PS00595 from=191 to=210 evalue=0.0 interpro_id=IPR020578 interpro_description=Aminotransferase class-V pyridoxal-phosphate binding site)
AMDSBA1_4_113
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

123118..124572
DNA (1455bp) protein (485aa)
cytosine/purines uracil thiamine allantoin permease
Putative purine-cytosine permease yxlA n=11 Tax=Bacillus RepID=YXLA_BACSU (db=UNIREF evalue=2.9e-98 bit_score=364.8 identity=41.1 coverage=93.6082474226804)
transmembrane_regions (db=TMHMM db_id=tmhmm from=355 to=377)
transmembrane_regions (db=TMHMM db_id=tmhmm from=394 to=413)
AMDSBA1_4_114
unknown

Not on your lists

comp(124806..125378)
DNA (573bp) protein (191aa)
124806..125378 - ( gc_cont=0.567)
AMDSBA1_4_115

Not on your lists

comp(125414..126076)
DNA (663bp) protein (221aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XFS5_CALS8 (db=UNIREF evalue=1.6e-27 bit_score=128.6 identity=46.4 coverage=61.53846153846154)
(db=HMMPfam db_id=PF08843 from=25 to=79 evalue=1.1e-07 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
Uncharacterized protein {ECO:0000313|EMBL:CBI05032.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
AMDSBA1_4_116
unknown

Not on your lists

comp(126027..126326)
DNA (300bp) protein (100aa)
126027..126326 - ( gc_cont=0.557)
AMDSBA1_4_117
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

126695..127138
DNA (444bp) protein (148aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Nucleotide cyclase (db=superfamily db_id=SSF55073 from=48 to=123 evalue=2.5e-16 interpro_id=IPR001054 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signal transduction (GO:0035556))
(db=HMMPfam db_id=PF00990 from=44 to=128 evalue=2.5e-14 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted)
no description (db=Gene3D db_id=G3DSA:3.30.70.270 from=39 to=130 evalue=1.8e-12)
AMDSBA1_4_118
unknown

Not on your lists

128038..128343
DNA (306bp) protein (102aa)
128038..128343 + ( gc_cont=0.402)
AMDSBA1_4_119
unknown

Not on your lists

128340..128726
DNA (387bp) protein (129aa)
128340..128726 + ( gc_cont=0.494)
AMDSBA1_4_120
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

129830..130807
DNA (978bp) protein (326aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TT05_9FIRM (db=UNIREF evalue=1.9e-08 bit_score=65.9 identity=26.2 coverage=77.60736196319019)
seg (db=Seg db_id=seg from=299 to=305)
seg (db=Seg db_id=seg from=148 to=173)
Displaying items 91-120 of 125 in total

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