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AMDSBA1_4

Alias: AMDSBA1_C3

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Displaying items 1-30 of 125 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_4_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..166)
DNA (165bp) protein (55aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily n=2 Tax=Sulfobacillus acidophilus RepID=F8IAB3_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEW04972.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
AMDSBA1_4_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(203..1147)
DNA (945bp) protein (315aa)
hypothetical protein
DMSO reductase anchor subunit (DmsC) n=2 Tax=Sulfobacillus acidophilus RepID=F8I3S2_SULAT (db=UNIREF evalue=7.2e-58 bit_score=229.9 identity=42.5 coverage=96.19047619047619)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=48 to=57)
AMDSBA1_4_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1144..1809)
DNA (666bp) protein (222aa)
4Fe-4S ferredoxin
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVN8_9FIRM (db=UNIREF evalue=5.7e-110 bit_score=402.5 identity=80.6 coverage=97.2972972972973)
seg (db=Seg db_id=seg from=206 to=217)
AMDSBA1_4_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1816..4689)
DNA (2874bp) protein (958aa)
molybdopterin oxidoreductase
molybdopterin oxidoreductase
Oxidoreductase, molybdopterin-binding n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V886_9RHOB (db=UNIREF evalue=5.8e-244 bit_score=849.7 identity=45.3 coverage=96.86847599164928)
seg (db=Seg db_id=seg from=433 to=449)
AMDSBA1_4_5
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5855..6793)
DNA (939bp) protein (313aa)
2-hydroxyacid dehydrogenase
Phosphoglycerate dehydrogenase n=1 Tax=Natronobacterium gregoryi SP2 RepID=G4GAJ0_9EURY (db=UNIREF evalue=5.3e-29 bit_score=134.0 identity=32.4 coverage=85.3035143769968)
D_2_HYDROXYACID_DH_3 (db=PatternScan db_id=PS00671 from=216 to=232 evalue=0.0 interpro_id=IPR006140 interpro_description=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: cofactor binding (GO:0048037), Biological Process: oxidation-reduction process (GO:0055114))
2-HYDROXYACID DEHYDROGENASE (db=HMMPanther db_id=PTHR10996:SF7 from=14 to=307 evalue=4.7e-66)
AMDSBA1_4_6
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7107..7841)
DNA (735bp) protein (245aa)
Transposase, IS605 OrfB family n=1 Tax=Natronobacterium gregoryi SP2 RepID=G4G5I6_9EURY (db=UNIREF evalue=2.6e-07 bit_score=61.6 identity=45.1 coverage=27.755102040816325)
coiled-coil (db=Coil db_id=coil from=62 to=83 evalue=NA)
seg (db=Seg db_id=seg from=76 to=91)
(db=HMMPfam db_id=PF07282 from=144 to=203 evalue=8.3e-15 interpro_id=IPR010095 interpro_description=Transposase IS605, OrfB, C-terminal)
AMDSBA1_4_7
unknown

Not on your lists

comp(7900..8319)
DNA (420bp) protein (140aa)
seg (db=Seg db_id=seg from=1 to=11)
AMDSBA1_4_8
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9048..10790
DNA (1743bp) protein (581aa)
ABC transporter-like protein
ABC transporter, ATP-binding protein n=1 Tax=Eremococcus coleocola ACS-139-V-Col8 RepID=E4KPP8_9LACT (db=UNIREF evalue=1.1e-80 bit_score=306.6 identity=30.7 coverage=96.90189328743546)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
AMDSBA1_4_9
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

10783..12600
DNA (1818bp) protein (606aa)
ABC transporter
ABC-type multidrug transport system, ATPase and permease component n=1 Tax=Reinekea blandensis MED297 RepID=A4BHU5_9GAMM (db=UNIREF evalue=8.9e-89 bit_score=333.6 identity=35.1 coverage=93.23432343234323)
transmembrane_regions (db=TMHMM db_id=tmhmm from=172 to=194)
transmembrane_regions (db=TMHMM db_id=tmhmm from=262 to=284)
AMDSBA1_4_10
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12630..13367)
DNA (738bp) protein (246aa)
hypothetical protein
Putative metal-dependent hydrolase n=1 Tax=Sulfurospirillum barnesii SES-3 RepID=I3XVF6_9PROT (db=UNIREF evalue=8.8e-11 bit_score=73.2 identity=29.3 coverage=39.83739837398374)
(db=HMMPfam db_id=PF01863 from=35 to=238 evalue=9.4e-52 interpro_id=IPR002725 interpro_description=Protein of unknown function DUF45)
Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EY75_9PROT
AMDSBA1_4_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13640..14740
DNA (1101bp) protein (367aa)
YueF n=2 Tax=Sulfobacillus acidophilus RepID=F8I362_SULAT (db=UNIREF evalue=3.6e-77 bit_score=294.3 identity=44.2 coverage=92.09809264305177)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=313 to=335)
seg (db=Seg db_id=seg from=330 to=351)
AMDSBA1_4_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14899..16497
DNA (1599bp) protein (533aa)
putative signal transduction histidine kinase
Histidine kinase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DQP5_9BACL (db=UNIREF evalue=5.1e-64 bit_score=251.1 identity=32.1 coverage=96.43527204502814)
coiled-coil (db=Coil db_id=coil from=306 to=327 evalue=NA)
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase (db=superfamily db_id=SSF55874 from=393 to=523 evalue=3.8e-18 interpro_id=IPR003594 interpro_description=ATPase-like, ATP-binding domain GO=Molecular Function: ATP binding (GO:0005524))
AMDSBA1_4_13
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16514..17149
DNA (636bp) protein (212aa)
LuxR family two component transcriptional regulator
seg (db=Seg db_id=seg from=98 to=107)
TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPONSE REGULATOR (INTESTINAL BACTERIA - BACTEROIDES THETAIOTAOMICRON) (db=HMMPanther db_id=PTHR23283:SF21 from=8 to=127 evalue=4.0e-10)
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=162 to=189 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA1_4_14
unknown

Not on your lists

comp(17207..17371)
DNA (165bp) protein (55aa)
seg (db=Seg db_id=seg from=22 to=41)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
AMDSBA1_4_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17550..19958
DNA (2409bp) protein (803aa)
glycoside hydrolase family protein
glycoside hydrolase family protein
Glycoside hydrolase family 31 n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ06_9FIRM (db=UNIREF evalue=3.0e-177 bit_score=627.9 identity=42.1 coverage=96.01494396014944)
AMDSBA1_4_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19984..21255
DNA (1272bp) protein (424aa)
major facilitator superfamily protein
major facilitator superfamily protein
Major facilitator superfamily MFS_1 n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ05_9FIRM (db=UNIREF evalue=4.0e-120 bit_score=437.2 identity=52.6 coverage=97.87735849056604)
transmembrane_regions (db=TMHMM db_id=tmhmm from=283 to=300)
AMDSBA1_4_17
unknown

Not on your lists

21545..22036
DNA (492bp) protein (164aa)
seg (db=Seg db_id=seg from=19 to=30)
MULTICOPPER_OXIDASE1 (db=PatternScan db_id=PS00079 from=137 to=157 evalue=0.0 interpro_id=IPR002355 interpro_description=Multicopper oxidase, copper-binding site GO=Molecular Function: copper ion binding (GO:0005507))
Cupredoxins (db=superfamily db_id=SSF49503 from=44 to=161 evalue=7.9e-09 interpro_id=IPR008972 interpro_description=Cupredoxin)
no description (db=Gene3D db_id=G3DSA:2.60.40.420 from=6 to=161 evalue=0.00011 interpro_id=IPR008972 interpro_description=Cupredoxin)
AMDSBA1_4_18
unknown

Not on your lists

comp(22525..22671)
DNA (147bp) protein (49aa)
seg (db=Seg db_id=seg from=23 to=41)
AMDSBA1_4_19
unknown

Not on your lists

comp(22871..23299)
DNA (429bp) protein (143aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=98 to=115)
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=141)
Chaperone J-domain (db=superfamily db_id=SSF46565 from=1 to=70 evalue=1.5e-12 interpro_id=IPR001623 interpro_description=Heat shock protein DnaJ, N-terminal GO=Molecular Function: heat shock protein binding (GO:0031072))
(db=HMMPfam db_id=PF00226 from=8 to=55 evalue=4.3e-08 interpro_id=IPR001623 interpro_description=Heat shock protein DnaJ, N-terminal GO=Molecular Function: heat shock protein binding (GO:0031072))
AMDSBA1_4_20
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

23462..24202
DNA (741bp) protein (247aa)
type 11 methyltransferase
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=4 to=244 evalue=1.8e-43)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=33 to=190 evalue=2.2e-30)
(db=HMMPfam db_id=PF08241 from=43 to=137 evalue=8.9e-13 interpro_id=IPR013216 interpro_description=Methyltransferase type 11 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
AMDSBA1_4_21
unknown

Not on your lists

comp(24181..24465)
DNA (285bp) protein (95aa)
24181..24465 - ( gc_cont=0.537)
AMDSBA1_4_22
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24979..25899)
DNA (921bp) protein (307aa)
heat shock protein HtpX
M48B family peptidase n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RQ88_9PROT (db=UNIREF evalue=3.4e-12 bit_score=78.2 identity=29.4 coverage=94.78827361563518)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=45 to=62)
AMDSBA1_4_23
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26180..28324)
DNA (2145bp) protein (715aa)
peptidase S9B dipeptidylpeptidase IV domain-containing protein
peptidase S9B dipeptidylpeptidase IV domain-containing protein
Dipeptidyl-peptidase IV n=2 Tax=Sulfobacillus acidophilus RepID=G8TXR5_9FIRM (db=UNIREF evalue=5.1e-136 bit_score=490.7 identity=39.2 coverage=97.06293706293707)
AMDSBA1_4_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28613..29185
DNA (573bp) protein (191aa)
Abortive infection protein
Abortive infection protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUU9_9FIRM (db=UNIREF evalue=1.8e-40 bit_score=171.4 identity=48.0 coverage=90.0523560209424)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
seg (db=Seg db_id=seg from=102 to=112)
AMDSBA1_4_25
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29195..29689)
DNA (495bp) protein (165aa)
DNA mismatch repair protein MutT
Methyltransferase type 11 n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9XF74_STRVR (db=UNIREF evalue=2.3e-07 bit_score=61.2 identity=45.8 coverage=41.81818181818181)
seg (db=Seg db_id=seg from=60 to=73)
NUDIX_BOX (db=PatternScan db_id=PS00893 from=54 to=75 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA1_4_26
unknown

Not on your lists

29785..30024
DNA (240bp) protein (80aa)
29785..30024 + ( gc_cont=0.521)
AMDSBA1_4_27
unknown

Not on your lists

30205..30483
DNA (279bp) protein (93aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
(db=HMMPfam db_id=PF09851 from=9 to=83 evalue=9.3e-11 interpro_id=IPR018649 interpro_description=Protein of unknown function DUF2078, membrane)
AMDSBA1_4_28
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(30515..31102)
DNA (588bp) protein (196aa)
phosphoglycerate mutase; K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1] (db=KEGG evalue=2.1e-07 bit_score=61.2 identity=28.7 coverage=82.6530612244898)
Phosphoglycerate mutase-like (db=superfamily db_id=SSF53254 from=1 to=172 evalue=4.6e-18)
no description (db=Gene3D db_id=G3DSA:3.40.50.1240 from=1 to=169 evalue=1.3e-11)
(db=HMMPfam db_id=PF00300 from=4 to=138 evalue=7.9e-06 interpro_id=IPR013078 interpro_description=Histidine phosphatase superfamily, clade-1)
AMDSBA1_4_29
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31555..31986
DNA (432bp) protein (144aa)
glutaredoxin-like domain protein
Protein disulfide oxidoreductase n=4 Tax=Thermococcus RepID=B6YTB7_THEON (db=UNIREF evalue=2.8e-09 bit_score=67.4 identity=33.1 coverage=95.13888888888889)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=3 to=117 evalue=3.9e-19 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
no description (db=Gene3D db_id=G3DSA:3.40.30.10 from=1 to=115 evalue=1.4e-12 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
AMDSBA1_4_30
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

32655..33689
DNA (1035bp) protein (345aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CL50_9BACI (db=UNIREF evalue=5.7e-08 bit_score=64.3 identity=22.3 coverage=85.21739130434783)
seg (db=Seg db_id=seg from=160 to=172)
Uncharacterized protein {ECO:0000313|EMBL:EST54731.1}; TaxID=1408254 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
Displaying items 1-30 of 125 in total

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