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AMDSBA1_15

Alias: AMDSBA1_C14

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Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_15_1
unknown

Not on your lists

comp(797..1264)
-----------------
DNA (468bp)
protein (156aa)
TT1751-like (db=superfamily db_id=SSF103247 from=6 to=128 evalue=1.6e-15 interpro_id=IPR005180 interpro_description=Domain of unknown function DUF302)
AMDSBA1_15_2
unknown

Not on your lists

1783..2037
-----------------
DNA (255bp)
protein (85aa)
1783..2037 + ( gc_cont=0.439)
AMDSBA1_15_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2562..2771
-----------------
DNA (210bp)
protein (70aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IK22_9PLAN (db=UNIREF evalue=1.1e-14 bit_score=84.3 identity=69.5 coverage=81.42857142857143)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PEY0_9BACT
AMDSBA1_15_4
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3349..4578
-----------------
DNA (1230bp)
protein (410aa)
signal protein
Diguanylate phosphodiesterase n=1 Tax=Frankia sp. EUN1f RepID=D3D474_9ACTO (db=UNIREF evalue=3.5e-20 bit_score=105.1 identity=34.4 coverage=51.707317073170735)
seg (db=Seg db_id=seg from=137 to=151)
PYP-like sensor domain (PAS domain) (db=superfamily db_id=SSF55785 from=270 to=367 evalue=2.4e-06)
AMDSBA1_15_5
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4854..6455)
-----------------
DNA (1602bp)
protein (534aa)
carbohydrate kinase FGGY rbh
carbohydrate kinase FGGY rbh
Carbohydrate kinase, FGGY n=1 Tax=Clostridium lentocellum DSM 5427 RepID=F2JLF3_CELLD (db=UNIREF evalue=5.9e-169 bit_score=599.7 identity=52.9 coverage=99.06367041198502)
AMDSBA1_15_6
Bacillus coagulans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6462..7862)
-----------------
DNA (1401bp)
protein (467aa)
sugar transporter rbh
Major facilitator family protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQG5_9FIRM (db=UNIREF evalue=8.9e-206 bit_score=721.8 identity=79.7 coverage=97.85867237687366)
transmembrane_regions (db=TMHMM db_id=tmhmm from=417 to=439)
transmembrane_regions (db=TMHMM db_id=tmhmm from=390 to=412)
AMDSBA1_15_7
Bacillus coagulans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8328..9032
-----------------
DNA (705bp)
protein (235aa)
araD; class II aldolase/adducin family protein rbh
L-ribulose-5-phosphate 4-epimerase UlaF n=60 Tax=Vibrio RepID=A6ADH5_VIBCL (db=UNIREF evalue=8.2e-75 bit_score=285.8 identity=60.0 coverage=97.02127659574468)
no description (db=Gene3D db_id=G3DSA:3.40.225.10 from=1 to=230 evalue=6.2e-77 interpro_id=IPR001303 interpro_description=Class II aldolase/adducin N-terminal GO=Molecular Function: metal ion binding (GO:0046872))
AraD-like aldolase/epimerase (db=superfamily db_id=SSF53639 from=1 to=222 evalue=8.2e-69 interpro_id=IPR001303 interpro_description=Class II aldolase/adducin N-terminal GO=Molecular Function: metal ion binding (GO:0046872))
AMDSBA1_15_8
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9063..10487
-----------------
DNA (1425bp)
protein (475aa)
L-arabinose isomerase rbh
L-arabinose isomerase rbh
L-arabinose isomerase n=3 Tax=Bacillus coagulans RepID=F7Z0Z0_BACC6 (db=UNIREF evalue=4.6e-234 bit_score=815.8 identity=81.6 coverage=99.36842105263159)
AMDSBA1_15_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11421..12551)
-----------------
DNA (1131bp)
protein (377aa)
GntR family transcriptional regulator rbh
GntR family transcriptional regulator rbh
Transcriptional regulator, GntR family with LacI sensor n=2 Tax=Sulfobacillus acidophilus RepID=G8TSY9_9FIRM (db=UNIREF evalue=8.1e-133 bit_score=479.2 identity=66.8 coverage=95.22546419098144)
AMDSBA1_15_10
unknown

Not on your lists

13540..13764
-----------------
DNA (225bp)
protein (75aa)
13540..13764 + ( gc_cont=0.458)
AMDSBA1_15_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13919..15394
-----------------
DNA (1476bp)
protein (492aa)
cytosine/purines uracil thiamine allantoin permease rbh
Cytosine/purines/uracil/thiamine/allantoin transporter n=11 Tax=Acetobacter RepID=C7JSF6_ACEPA (db=UNIREF evalue=7.6e-30 bit_score=137.5 identity=27.8 coverage=90.65040650406505)
transmembrane_regions (db=TMHMM db_id=tmhmm from=446 to=468)
transmembrane_regions (db=TMHMM db_id=tmhmm from=409 to=431)
AMDSBA1_15_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15394..16587
-----------------
DNA (1194bp)
protein (398aa)
amidohydrolase
amidohydrolase
Amidohydrolase n=2 Tax=Sulfobacillus acidophilus RepID=F8I3C8_SULAT (db=UNIREF evalue=1.3e-141 bit_score=508.4 identity=63.5 coverage=96.23115577889448)
AMDSBA1_15_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16602..17759
-----------------
DNA (1158bp)
protein (386aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AYU3_AZOBR (db=UNIREF evalue=2.2e-24 bit_score=119.0 identity=34.8 coverage=70.72538860103627)
seg (db=Seg db_id=seg from=26 to=44)
(db=HMMPfam db_id=PF06545 from=70 to=265 evalue=3.2e-38 interpro_id=IPR009499 interpro_description=Protein of unknown function DUF1116)
AMDSBA1_15_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17713..19362
-----------------
DNA (1650bp)
protein (550aa)
thiamine pyrophosphate-requiring enzyme benzoylformate decarboxylase (EC:4.1.1.7)
Benzoylformate decarboxylase related proten n=1 Tax=Thermoplasma acidophilum DSM 1728 RepID=Q9HK28_THEAC (db=UNIREF evalue=7.2e-13 bit_score=81.3 identity=30.3 coverage=26.727272727272727)
Thiamin diphosphate-binding fold (THDP-binding) (db=superfamily db_id=SSF52518 from=370 to=546 evalue=2.2e-27)
Thiamin diphosphate-binding fold (THDP-binding) (db=superfamily db_id=SSF52518 from=4 to=198 evalue=3.3e-39)
AMDSBA1_15_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19362..20294
-----------------
DNA (933bp)
protein (311aa)
molybdopterin dehydrogenase FAD-binding protein
Nicotine dehydrogenase chain A n=2 Tax=Sulfobacillus acidophilus RepID=F8I3C9_SULAT (db=UNIREF evalue=1.6e-73 bit_score=282.0 identity=50.0 coverage=90.67524115755627)
FAD-binding domain (db=superfamily db_id=SSF56176 from=8 to=182 evalue=2.5e-42 interpro_id=IPR016166 interpro_description=FAD-binding, type 2 GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: oxidoreductase activity, acting on CH-OH group of donors (GO:0016614), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Biological Process: oxidation-reduction process (GO:0055114))
(db=HMMPfam db_id=PF00941 from=12 to=178 evalue=5.8e-39 interpro_id=IPR002346 interpro_description=Molybdopterin dehydrogenase, FAD-binding GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA1_15_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20294..20764
-----------------
DNA (471bp)
protein (157aa)
(2Fe-2S)-binding protein
2FE2S_FER_1 (db=PatternScan db_id=PS00197 from=39 to=47 evalue=0.0 interpro_id=IPR006058 interpro_description=2Fe-2S ferredoxin, iron-sulphur binding site GO=Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537))
XANTHINE DEHYDROGENASE (db=HMMPanther db_id=PTHR11908 from=1 to=148 evalue=9.2e-37)
CO dehydrogenase ISP C-domain like (db=superfamily db_id=SSF47741 from=65 to=153 evalue=4.7e-27 interpro_id=IPR002888 interpro_description=[2Fe-2S]-binding GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA1_15_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20746..23052
-----------------
DNA (2307bp)
protein (769aa)
Xanthine dehydrogenase n=2 Tax=Sulfobacillus acidophilus RepID=G8TUQ5_9FIRM (db=UNIREF evalue=0.0 bit_score=1083.2 identity=69.3 coverage=97.13914174252277)
xanthine dehydrogenase (EC:1.17.1.4)
xanthine dehydrogenase (EC:1.17.1.4)
AMDSBA1_15_18
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23294..24442)
-----------------
DNA (1149bp)
protein (383aa)
(db=HMMPfam db_id=PF07905 from=5 to=120 evalue=2.5e-28 interpro_id=IPR012914 interpro_description=Purine catabolism PurC-like)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ14164.1}; TaxID=44251 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus (Paenibacillus azo
AMDSBA1_15_19
unknown

Not on your lists

25869..25988
-----------------
DNA (120bp)
protein (40aa)
25869..25988 + ( gc_cont=0.625)
AMDSBA1_15_20
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26078..26965
-----------------
DNA (888bp)
protein (296aa)
polysaccharide deacetylase
polysaccharide deacetylase
Carbohydrate esterase family 4 n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7ZLB9_NECH7 (db=UNIREF evalue=5.8e-110 bit_score=402.9 identity=61.3 coverage=97.63513513513513)
AMDSBA1_15_21
Tatumella morbirosei, Tatumella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27227..28585
-----------------
DNA (1359bp)
protein (453aa)
hydroxydechloroatrazine ethylaminohydrolase
Guanine deaminase n=6 Tax=Alteromonadales RepID=A0Y0T8_9GAMM (db=UNIREF evalue=3.2e-27 bit_score=128.6 identity=29.4 coverage=77.2626931567329)
seg (db=Seg db_id=seg from=331 to=350)
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=60 to=373 evalue=4.1e-84)
AMDSBA1_15_22
unknown

Not on your lists

28704..29135
-----------------
DNA (432bp)
protein (144aa)
28704..29135 + ( gc_cont=0.542)
AMDSBA1_15_23

Not on your lists

comp(29167..31653)
-----------------
DNA (2487bp)
protein (829aa)
hypothetical protein
hypothetical protein
UPF0753 protein UBAL2_80490148 n=2 Tax=Leptospirillum sp. Group II RepID=A3ESS6_9BACT (db=UNIREF evalue=6.8e-249 bit_score=865.9 identity=52.1 coverage=96.86369119420989)
AMDSBA1_15_24
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(31650..33320)
-----------------
DNA (1671bp)
protein (557aa)
NADH dehydrogenase
NADH dehydrogenase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NXP4_9RHOB (db=UNIREF evalue=8.2e-65 bit_score=253.8 identity=33.7 coverage=91.02333931777379)
seg (db=Seg db_id=seg from=11 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=320 to=342)
AMDSBA1_15_25
unknown

Not on your lists

comp(33917..34168)
-----------------
DNA (252bp)
protein (84aa)
33917..34168 - ( gc_cont=0.468)
AMDSBA1_15_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34120..34737)
-----------------
DNA (618bp)
protein (206aa)
Phosphoglycerate mutase n=2 Tax=Sulfobacillus acidophilus RepID=G8TXS6_9FIRM (db=UNIREF evalue=2.1e-50 bit_score=204.5 identity=51.5 coverage=92.71844660194175)
phosphoglycerate mutase
seg (db=Seg db_id=seg from=34 to=44)
Phosphoglycerate mutase-like (db=superfamily db_id=SSF53254 from=1 to=198 evalue=1.9e-53)
AMDSBA1_15_27
unknown

Not on your lists

comp(34971..35537)
-----------------
DNA (567bp)
protein (189aa)
hypothetical protein; K01673 carbonic anhydrase [EC:4.2.1.1] (db=KEGG evalue=4.5e-07 bit_score=60.1 identity=33.3 coverage=58.201058201058196)
AMDSBA1_15_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35649..36521)
-----------------
DNA (873bp)
protein (291aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZIA0_NODSP (db=UNIREF evalue=2.4e-47 bit_score=194.9 identity=36.7 coverage=95.87628865979381)
Uncharacterized protein {ECO:0000313|EMBL:AEJ41532.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXS5_SULAD
AMDSBA1_15_29
unknown

Not on your lists

37034..37183
-----------------
DNA (150bp)
protein (50aa)
37034..37183 + ( gc_cont=0.493)
AMDSBA1_15_30
unknown

Not on your lists

comp(37444..37743)
-----------------
DNA (300bp)
protein (100aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
Displaying items 1-30 of 52 in total

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