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AMDSBA1_19

Alias: AMDSBA1_C18

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA1_19_1
S_OP1_64_32, KB1, Bacteria

Not on your lists

125..1072
-----------------
DNA (948bp)
protein (316aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Kyrpidia tusciae DSM 2912 RepID=D5WXQ3_BACT2 (db=UNIREF evalue=9.2e-21 bit_score=106.7 identity=27.4 coverage=84.81012658227847)
seg (db=Seg db_id=seg from=58 to=72)
(db=HMMPfam db_id=PF04184 from=52 to=224 evalue=1.1e-08 interpro_id=IPR007311 interpro_description=ST7)
AMDSBA1_19_2
Geobacillus thermoleovorans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1430..2377
-----------------
DNA (948bp)
protein (316aa)
Smf
Probable smf protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JIJ8_9ALTE (db=UNIREF evalue=1.6e-28 bit_score=132.5 identity=34.4 coverage=66.45569620253164)
(db=HMMPfam db_id=PF02481 from=86 to=284 evalue=1.8e-62 interpro_id=IPR003488 interpro_description=DNA recombination-mediator protein A GO=Biological Process: DNA mediated transformation (GO:0009294))
MoCo carrier protein-like (db=superfamily db_id=SSF102405 from=87 to=297 evalue=2.0e-33)
AMDSBA1_19_3
unknown

Not on your lists

2795..3358
-----------------
DNA (564bp)
protein (188aa)
seg (db=Seg db_id=seg from=175 to=186)
seg (db=Seg db_id=seg from=152 to=163)
AMDSBA1_19_4
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3477..3845
-----------------
DNA (369bp)
protein (123aa)
3477..3845 + ( gc_cont=0.569)
Reverse transcriptase n=2 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH39_METAC
AMDSBA1_19_5
unknown

Not on your lists

3842..4012
-----------------
DNA (171bp)
protein (57aa)
3842..4012 + ( gc_cont=0.561)
AMDSBA1_19_6
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4116..4589)
-----------------
DNA (474bp)
protein (158aa)
Putative uncharacterized protein n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UGB5_9RHOB (db=UNIREF evalue=2.8e-10 bit_score=70.9 identity=30.6 coverage=89.87341772151899)
no description (db=Gene3D db_id=G3DSA:3.10.129.10 from=2 to=153 evalue=3.8e-24)
Thioesterase/thiol ester dehydrase-isomerase (db=superfamily db_id=SSF54637 from=4 to=154 evalue=7.3e-18)
putative thioesterase domain protein
AMDSBA1_19_7
RIFOXYA1_FULL_Paenibacillus_44_5_curated, Firmicutes, Bacteria

Not on your lists

4825..5172
-----------------
DNA (348bp)
protein (116aa)
Putative MerR-family transcriptional regulator n=1 Tax=Cellvibrio sp. BR RepID=I3I5L1_9GAMM (db=UNIREF evalue=1.3e-17 bit_score=94.7 identity=40.0 coverage=98.27586206896551)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=113 evalue=1.8e-25)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=14 to=113 evalue=1.7e-19)
METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10108 from=3 to=110 evalue=8.2e-16)
AMDSBA1_19_8
RIFOXYA1_FULL_Paenibacillus_44_5_curated, Firmicutes, Bacteria

Not on your lists

5126..5605
-----------------
DNA (480bp)
protein (160aa)
type 11 methyltransferase
Putative MerR-family transcriptional regulator n=1 Tax=Cellvibrio sp. BR RepID=I3I5L1_9GAMM (db=UNIREF evalue=2.2e-31 bit_score=141.0 identity=46.6 coverage=90.0)
Methyltransferase type 11 n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PDU0_9CYAN
AMDSBA1_19_9
Austwickia chelonae, Austwickia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6112..6351)
-----------------
DNA (240bp)
protein (80aa)
6112..6351 - ( gc_cont=0.579)
Uncharacterized protein n=1 Tax=Austwickia chelonae NBRC 105200 RepID=K6VT80_9MICO
AMDSBA1_19_10
unknown

Not on your lists

comp(7049..7240)
-----------------
DNA (192bp)
protein (64aa)
7049..7240 - ( gc_cont=0.531)
AMDSBA1_19_11
unknown

Not on your lists

comp(7237..7545)
-----------------
DNA (309bp)
protein (103aa)
coiled-coil (db=Coil db_id=coil from=28 to=49 evalue=NA)
(db=HMMPfam db_id=PF01402 from=32 to=70 evalue=4.4e-08 interpro_id=IPR002145 interpro_description=CopG-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA1_19_12
unknown

Not on your lists

comp(7542..7862)
-----------------
DNA (321bp)
protein (107aa)
7542..7862 - ( gc_cont=0.555)
AMDSBA1_19_13
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8060..8809)
-----------------
DNA (750bp)
protein (250aa)
ybaJ; putative methyltransferase
Methyltransferase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PTZ1_9SPIO (db=UNIREF evalue=9.7e-66 bit_score=255.8 identity=63.5 coverage=75.2)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=15 to=245 evalue=3.1e-27)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=46 to=201 evalue=4.4e-20)
AMDSBA1_19_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(10019..10246)
-----------------
DNA (228bp)
protein (76aa)
seg (db=Seg db_id=seg from=16 to=40)
(db=HMMPfam db_id=PF09720 from=12 to=66 evalue=8.2e-09 interpro_id=IPR013406 interpro_description=Conserved hypothetical protein CHP02574, addiction module)
hypothetical protein
AMDSBA1_19_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11137..12669)
-----------------
DNA (1533bp)
protein (511aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TTN2_9FIRM (db=UNIREF evalue=1.5e-52 bit_score=213.0 identity=29.7 coverage=98.63013698630137)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=370 to=379)
AMDSBA1_19_16
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13037..14686)
-----------------
DNA (1650bp)
protein (550aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=E6TQJ7_BACCJ (db=UNIREF evalue=2.5e-114 bit_score=418.3 identity=39.9 coverage=97.81818181818181)
transmembrane_regions (db=TMHMM db_id=tmhmm from=521 to=538)
AMDSBA1_19_17
Aneurinibacillus migulanus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14735..15526)
-----------------
DNA (792bp)
protein (264aa)
ABC transporter
Protein McbF n=4 Tax=Escherichia coli RepID=MCBF_ECOLX (db=UNIREF evalue=1.3e-12 bit_score=79.3 identity=25.5 coverage=84.84848484848484)
seg (db=Seg db_id=seg from=89 to=103)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=10 to=240 evalue=6.0e-85)
AMDSBA1_19_18
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16196..17428)
-----------------
DNA (1233bp)
protein (411aa)
major facilitator superfamily MFS_1
Major facilitator transporter n=2 Tax=Amycolatopsis mediterranei RepID=G0FW76_AMYMD (db=UNIREF evalue=2.1e-09 bit_score=69.3 identity=25.2 coverage=89.78102189781022)
seg (db=Seg db_id=seg from=307 to=321)
transmembrane_regions (db=TMHMM db_id=tmhmm from=212 to=234)
AMDSBA1_19_19
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

17674..18174
-----------------
DNA (501bp)
protein (167aa)
hypothetical protein
seg (db=Seg db_id=seg from=74 to=89)
Conserved domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9S8I2_RUMAL
AMDSBA1_19_20
unknown

Not on your lists

19244..19387
-----------------
DNA (144bp)
protein (48aa)
seg (db=Seg db_id=seg from=13 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA1_19_21
unknown

Not on your lists

comp(20387..21043)
-----------------
DNA (657bp)
protein (219aa)
seg (db=Seg db_id=seg from=187 to=206)
seg (db=Seg db_id=seg from=32 to=39)
AMDSBA1_19_22
unknown

Not on your lists

comp(21317..21562)
-----------------
DNA (246bp)
protein (82aa)
21317..21562 - ( gc_cont=0.533)
AMDSBA1_19_23
BJP_08E140C01_10KDA_Methylophilales_47_88, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22683..23027)
-----------------
DNA (345bp)
protein (115aa)
hypothetical protein
Uncharacterized protein n=14 Tax=Pseudomonas syringae group RepID=F3FCQ2_PSESX (db=UNIREF evalue=1.2e-10 bit_score=71.6 identity=39.1 coverage=75.65217391304347)
transmembrane_regions (db=TMHMM db_id=tmhmm from=79 to=101)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
AMDSBA1_19_24
unknown

Not on your lists

23251..23487
-----------------
DNA (237bp)
protein (79aa)
23251..23487 + ( gc_cont=0.519)
AMDSBA1_19_25
unknown

Not on your lists

24120..24914
-----------------
DNA (795bp)
protein (265aa)
24120..24914 + ( gc_cont=0.472)
AMDSBA1_19_26
unknown

Not on your lists

comp(25666..25998)
-----------------
DNA (333bp)
protein (111aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
AMDSBA1_19_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25995..26228)
-----------------
DNA (234bp)
protein (78aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U190_9FIRM (db=UNIREF evalue=4.3e-12 bit_score=75.9 identity=51.9 coverage=94.87179487179486)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I7G4_SULAT
AMDSBA1_19_28
unknown

Not on your lists

26768..26998
-----------------
DNA (231bp)
protein (77aa)
26768..26998 + ( gc_cont=0.481)
AMDSBA1_19_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27152..27883)
-----------------
DNA (732bp)
protein (244aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=89 to=111)
transmembrane_regions (db=TMHMM db_id=tmhmm from=18 to=40)
seg (db=Seg db_id=seg from=87 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=69)
AMDSBA1_19_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28286..28612
-----------------
DNA (327bp)
protein (109aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZV2_9FIRM (db=UNIREF evalue=7.6e-15 bit_score=85.5 identity=37.0 coverage=90.82568807339449)
seg (db=Seg db_id=seg from=31 to=45)
Uncharacterized protein n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8TZV2_SULAD
Displaying items 1-30 of 77 in total

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