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AMDSBA1_24

Alias: AMDSBA1_C23

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Displaying items 31-60 of 82 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_24_31
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24865..26118)
DNA (1254bp) protein (418aa)
folC; hypothetical protein
FolC bifunctional protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP48_9FIRM (db=UNIREF evalue=2.7e-52 bit_score=211.8 identity=34.8 coverage=94.97607655502392)
seg (db=Seg db_id=seg from=170 to=184)
FOLYLPOLYGLU_SYNT_2 (db=PatternScan db_id=PS01012 from=132 to=147 evalue=0.0 interpro_id=IPR018109 interpro_description=Folylpolyglutamate synthetase, conserved site GO=Molecular Function: tetrahydrofolylpolyglutamate synthase activity (GO:0004326), Molecular Function: ATP binding (GO:0005524), Biological Process: folic acid-containing compound biosynthetic process (GO:0009396))
AMDSBA1_24_32
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(26115..28754)
DNA (2640bp) protein (880aa)
valyl-tRNA synthetase (EC:6.1.1.9)
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=2 Tax=Sulfobacillus acidophilus RepID=F8I7U0_SULAT (db=UNIREF evalue=0.0 bit_score=1194.9 identity=64.6 coverage=99.0909090909091)
coiled-coil (db=Coil db_id=coil from=812 to=847 evalue=NA)
AMDSBA1_24_33
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29127..29393)
DNA (267bp) protein (89aa)
10 kDa chaperonin
10 kDa chaperonin 1 n=3 Tax=Bradyrhizobium japonicum RepID=CH101_BRAJA (db=UNIREF evalue=1.1e-16 bit_score=91.3 identity=48.4 coverage=96.62921348314607)
CHAPERONINS_CPN10 (db=PatternScan db_id=PS00681 from=3 to=27 evalue=0.0 interpro_id=IPR018369 interpro_description=Chaperonin Cpn10, conserved site GO=Molecular Function: ATP binding (GO:0005524), Biological Process: protein folding (GO:0006457))
no description (db=HMMSmart db_id=SM00883 from=2 to=86 evalue=7.7e-41 interpro_id=IPR020818 interpro_description=Chaperonin Cpn10 GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
AMDSBA1_24_34
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29557..30468
DNA (912bp) protein (304aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8U0G2_9FIRM (db=UNIREF evalue=2.7e-46 bit_score=191.4 identity=36.3 coverage=95.39473684210526)
seg (db=Seg db_id=seg from=44 to=51)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=23 evalue=6.0)
AMDSBA1_24_35
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30444..30977)
DNA (534bp) protein (178aa)
N-acetyltransferase GCN5
Acetyltransferase, putative n=1 Tax=Marinomonas sp. MED121 RepID=A3YEU8_9GAMM (db=UNIREF evalue=2.4e-10 bit_score=71.2 identity=33.9 coverage=92.13483146067416)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=171 evalue=4.3e-21 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=10 to=173 evalue=4.7e-18 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA1_24_36
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31873..32469
DNA (597bp) protein (199aa)
phosphoglycerate mutase
Phosphoglycerate mutase n=2 Tax=Sulfobacillus acidophilus RepID=G8U0W1_9FIRM (db=UNIREF evalue=9.5e-56 bit_score=222.2 identity=56.3 coverage=94.9748743718593)
Phosphoglycerate mutase-like (db=superfamily db_id=SSF53254 from=6 to=196 evalue=1.8e-15)
(db=HMMPfam db_id=PF00300 from=9 to=166 evalue=1.3e-09 interpro_id=IPR013078 interpro_description=Histidine phosphatase superfamily, clade-1)
AMDSBA1_24_37
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32462..33034)
DNA (573bp) protein (191aa)
GTP-binding protein engB
Probable GTP-binding protein EngB n=1 Tax=Agrobacterium vitis S4 RepID=ENGB_AGRVS (db=UNIREF evalue=4.6e-15 bit_score=87.0 identity=32.6 coverage=86.38743455497382)
GTPase_YsxC: ribosome biogenesis GTP-bind (db=HMMTigr db_id=TIGR03598 from=6 to=184 evalue=1.2e-59 interpro_id=IPR019987 interpro_description=GTP-binding protein, ribosome biogenesis, YsxC GO=Biological Process: barrier septum assembly (GO:0000917), Molecular Function: GTP binding (GO:0005525))
MSS1/TRME-RELATED GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR11649 from=18 to=187 evalue=1.4e-49)
AMDSBA1_24_38
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(33018..35354)
DNA (2337bp) protein (779aa)
lon; ATP-dependent protease La
lon; ATP-dependent protease La
Lon protease 1 n=21 Tax=Bacillus RepID=LON1_BACSU (db=UNIREF evalue=1.8e-251 bit_score=874.4 identity=55.7 coverage=98.45956354300385)
coiled-coil (db=Coil db_id=coil from=227 to=265 evalue=NA)
AMDSBA1_24_39
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(35477..37165)
DNA (1689bp) protein (563aa)
anti-sigma H sporulation factor LonB (EC:3.4.21.53)
anti-sigma H sporulation factor LonB (EC:3.4.21.53)
Lon protease 2 n=21 Tax=Bacillus RepID=LON2_BACSU (db=UNIREF evalue=2.7e-196 bit_score=690.6 identity=59.9 coverage=96.0923623445826)
AMDSBA1_24_40
unknown

Not on your lists

37261..37434
DNA (174bp) protein (58aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
AMDSBA1_24_41
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37378..38649)
DNA (1272bp) protein (424aa)
ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit clpX
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Symbiobacterium thermophilum IAM 14863 RepID=CLPX_SYMTH (db=UNIREF evalue=3.3e-199 bit_score=699.9 identity=81.6 coverage=99.52830188679245)
seg (db=Seg db_id=seg from=348 to=360)
AMDSBA1_24_42
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39283..40605)
DNA (1323bp) protein (441aa)
tig; trigger factor
Trigger factor n=2 Tax=Desulfotalea psychrophila LSv54 RepID=TIG_DESPS (db=UNIREF evalue=1.2e-45 bit_score=189.9 identity=27.4 coverage=97.27891156462584)
seg (db=Seg db_id=seg from=361 to=378)
tig: trigger factor (db=HMMTigr db_id=TIGR00115 from=11 to=428 evalue=2.0e-113 interpro_id=IPR005215 interpro_description=Trigger factor GO=Biological Process: protein transport (GO:0015031))
AMDSBA1_24_43
unknown

Not on your lists

comp(41349..41537)
DNA (189bp) protein (63aa)
seg (db=Seg db_id=seg from=45 to=60)
seg (db=Seg db_id=seg from=18 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=60)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
AMDSBA1_24_44
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41534..42253)
DNA (720bp) protein (240aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Frankia sp. EuI1c RepID=E3J6V7_FRASU (db=UNIREF evalue=2.1e-49 bit_score=201.4 identity=46.8 coverage=95.0)
seg (db=Seg db_id=seg from=142 to=169)
seg (db=Seg db_id=seg from=127 to=140)
AMDSBA1_24_45
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42766..43365)
DNA (600bp) protein (200aa)
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
Ribonuclease PH/Ham1 protein n=1 Tax=Enterococcus italicus DSM 15952 RepID=E6LG35_9ENTE (db=UNIREF evalue=1.4e-27 bit_score=128.6 identity=41.7 coverage=90.5)
HAM1 PROTEIN-RELATED (db=HMMPanther db_id=PTHR11067:SF1 from=4 to=198 evalue=1.7e-53)
INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN (db=HMMPanther db_id=PTHR11067 from=4 to=198 evalue=1.7e-53 interpro_id=IPR002637 interpro_description=Ham1-like protein GO=Molecular Function: hydrolase activity (GO:0016787))
AMDSBA1_24_46
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(43352..44098)
DNA (747bp) protein (249aa)
RNAse PH (EC:2.7.7.56)
Ribonuclease PH n=2 Tax=Alteromonas macleodii RepID=RNPH_ALTMD (db=UNIREF evalue=6.1e-60 bit_score=236.5 identity=53.2 coverage=93.97590361445783)
RIBONUCLEASE_PH (db=PatternScan db_id=PS01277 from=118 to=131 evalue=0.0 interpro_id=IPR018336 interpro_description=Ribonuclease PH, conserved site)
RNasePH: ribonuclease PH (db=HMMTigr db_id=TIGR01966 from=4 to=239 evalue=9.0e-124 interpro_id=IPR002381 interpro_description=Ribonuclease phosphorolytic, bacterial-type GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: tRNA-specific ribonuclease activity (GO:0004549), Biological Process: tRNA processing (GO:0008033))
AMDSBA1_24_47
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44541..45002)
DNA (462bp) protein (154aa)
smpB; SsrA-binding protein
SsrA-binding protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E6Z7_GEOLS (db=UNIREF evalue=3.4e-37 bit_score=160.2 identity=51.0 coverage=94.15584415584416)
Small protein B (SmpB) (db=superfamily db_id=SSF74982 from=4 to=132 evalue=3.5e-49 interpro_id=IPR023620 interpro_description=Small protein B)
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=7 to=150 evalue=3.8e-85 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723))
AMDSBA1_24_48
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

45354..47081
DNA (1728bp) protein (576aa)
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase
Uncharacterized protein n=2 Tax=Ciona savignyi RepID=H2ZDR6_CIOSA (db=UNIREF evalue=4.3e-32 bit_score=145.2 identity=28.5 coverage=58.68055555555556)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
AMDSBA1_24_49
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47900..48307)
DNA (408bp) protein (136aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I558_SULAT (db=UNIREF evalue=1.9e-07 bit_score=61.2 identity=34.9 coverage=69.11764705882352)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I558_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEJ39706.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA1_24_50
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48450..49325
DNA (876bp) protein (292aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M069_ACIFD (db=UNIREF evalue=4.0e-79 bit_score=300.4 identity=56.3 coverage=95.8904109589041)
seg (db=Seg db_id=seg from=207 to=221)
seg (db=Seg db_id=seg from=142 to=158)
AMDSBA1_24_51
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(49322..51511)
DNA (2190bp) protein (730aa)
rnr; ribonuclease R
Ribonuclease R n=2 Tax=Lachnospiraceae RepID=F7JY36_9FIRM (db=UNIREF evalue=1.2e-132 bit_score=479.6 identity=40.0 coverage=89.17808219178082)
RIBONUCLEASE_II (db=PatternScan db_id=PS01175 from=552 to=576 evalue=0.0 interpro_id=IPR022966 interpro_description=Ribonuclease II/R, conserved site)
AMDSBA1_24_52
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51648..51881)
DNA (234bp) protein (78aa)
seg (db=Seg db_id=seg from=25 to=45)
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
(db=HMMPfam db_id=PF03840 from=3 to=74 evalue=2.4e-11 interpro_id=IPR004692 interpro_description=Preprotein translocase SecG subunit GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
AMDSBA1_24_53
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(52229..53545)
DNA (1317bp) protein (439aa)
hypothetical protein
hypothetical protein
Major facilitator superfamily MFS_1 n=1 Tax=Burkholderia graminis C4D1M RepID=B1G1M7_9BURK (db=UNIREF evalue=1.0e-38 bit_score=166.8 identity=28.0 coverage=95.21640091116174)
transmembrane_regions (db=TMHMM db_id=tmhmm from=249 to=271)
AMDSBA1_24_54
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53870..54880)
DNA (1011bp) protein (337aa)
Haloacid dehalogenase domain protein hydrolase n=2 Tax=Sulfobacillus acidophilus RepID=G8U0N1_9FIRM (db=UNIREF evalue=2.0e-114 bit_score=417.9 identity=61.3 coverage=98.51632047477746)
haloacid dehalogenase domain-containing protein hydrolase
haloacid dehalogenase domain-containing protein hydrolase
seg (db=Seg db_id=seg from=124 to=142)
AMDSBA1_24_55
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54877..56151)
DNA (1275bp) protein (425aa)
enolase (EC:4.2.1.11)
enolase (EC:4.2.1.11)
Enolase n=2 Tax=Sulfobacillus acidophilus RepID=G8U0N0_9FIRM (db=UNIREF evalue=8.0e-153 bit_score=545.8 identity=65.3 coverage=99.29411764705883)
coiled-coil (db=Coil db_id=coil from=181 to=202 evalue=NA)
AMDSBA1_24_56
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56148..57698)
DNA (1551bp) protein (517aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Acholeplasma laidlawii PG-8A RepID=GPMI_ACHLI (db=UNIREF evalue=1.6e-102 bit_score=379.0 identity=42.4 coverage=97.48549323017409)
AMDSBA1_24_57
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(57750..58490)
DNA (741bp) protein (247aa)
tpiA; Triose-phosphate isomerase
Triosephosphate isomerase n=1 Tax=Methylococcus capsulatus str. Bath RepID=TPIS_METCA (db=UNIREF evalue=3.1e-40 bit_score=171.0 identity=37.2 coverage=96.76113360323887)
seg (db=Seg db_id=seg from=144 to=155)
TIM_1 (db=PatternScan db_id=PS00171 from=161 to=171 evalue=0.0 interpro_id=IPR020861 interpro_description=Triosephosphate isomerase, active site GO=Molecular Function: triose-phosphate isomerase activity (GO:0004807))
AMDSBA1_24_58
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(58521..59726)
DNA (1206bp) protein (402aa)
pgk; phosphoglycerate kinase
Phosphoglycerate kinase n=4 Tax=Leishmania RepID=A4HIS6_LEIBR (db=UNIREF evalue=5.2e-77 bit_score=293.9 identity=41.5 coverage=95.02487562189054)
seg (db=Seg db_id=seg from=205 to=225)
seg (db=Seg db_id=seg from=348 to=361)
AMDSBA1_24_59
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(59729..60736)
DNA (1008bp) protein (336aa)
gapA; glyceraldehyde-3-phosphate dehydrogenase
gapA; glyceraldehyde-3-phosphate dehydrogenase
Glyceraldehyde-3-phosphate dehydrogenase n=3 Tax=Sulfobacillus acidophilus RepID=A1Z6C4_9FIRM (db=UNIREF evalue=1.7e-129 bit_score=468.0 identity=70.1 coverage=98.80952380952381)
AMDSBA1_24_60
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(60871..61530)
DNA (660bp) protein (220aa)
phosphate uptake regulator PhoU
phosphate uptake regulator PhoU
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AVP5_9FIRM (db=UNIREF evalue=7.3e-41 bit_score=172.9 identity=39.2 coverage=98.18181818181819)
seg (db=Seg db_id=seg from=66 to=79)
Displaying items 31-60 of 82 in total

View Taxonomy