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AMDSBA1_26

Alias: AMDSBA1_C25

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_26_1
unknown

Not on your lists

comp(2..148)
DNA (147bp) protein (49aa)
seg (db=Seg db_id=seg from=5 to=16)
TAT_signal_seq: Tat (twin-arginine tra (db=HMMTigr db_id=TIGR01409 from=19 to=48 evalue=0.00036 interpro_id=IPR019546 interpro_description=Twin-arginine translocation pathway, signal sequence, bacterial/archaeal)
TAT (db=ProfileScan db_id=PS51318 from=1 to=48 evalue=8.504 interpro_id=IPR006311 interpro_description=Twin-arginine translocation pathway, signal sequence)
AMDSBA1_26_2
unknown

Not on your lists

comp(666..1187)
DNA (522bp) protein (174aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
(db=HMMPfam db_id=PF06525 from=30 to=94 evalue=5.0e-05 interpro_id=IPR010532 interpro_description=Sulfocyanin)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=23 evalue=5.0)
AMDSBA1_26_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1344..2561)
DNA (1218bp) protein (406aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQY5_ALIAD (db=UNIREF evalue=6.7e-16 bit_score=90.9 identity=24.9 coverage=84.48275862068965)
seg (db=Seg db_id=seg from=193 to=203)
transmembrane_regions (db=TMHMM db_id=tmhmm from=382 to=404)
AMDSBA1_26_4
unknown

Not on your lists

comp(2639..2851)
DNA (213bp) protein (71aa)
2639..2851 - ( gc_cont=0.498)
AMDSBA1_26_5
unknown

Not on your lists

comp(3052..3357)
DNA (306bp) protein (102aa)
3052..3357 - ( gc_cont=0.523)
AMDSBA1_26_6
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3692..4393)
DNA (702bp) protein (234aa)
HAD-superfamily hydrolase
DUMP phosphatase n=1 Tax=Oceanimonas sp. GK1 RepID=H2G038_OCESG (db=UNIREF evalue=2.6e-12 bit_score=78.2 identity=30.3 coverage=89.31623931623932)
HAD-like (db=superfamily db_id=SSF56784 from=9 to=233 evalue=4.7e-40 interpro_id=IPR023214 interpro_description=HAD-like domain)
HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN CONTAINING PROTEIN 4 (db=HMMPanther db_id=PTHR12725:SF4 from=3 to=209 evalue=5.0e-28)
AMDSBA1_26_7
Paenibacillus pini, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4493..5056
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9917 RepID=A3ZAT6_9SYNE (db=UNIREF evalue=2.7e-20 bit_score=104.4 identity=38.2 coverage=75.53191489361703)
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=160)
transmembrane_regions (db=TMHMM db_id=tmhmm from=101 to=123)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
AMDSBA1_26_8
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

5257..6717
DNA (1461bp) protein (487aa)
hypothetical protein
hypothetical protein
Deoxyribodipyrimidine photo-lyase type I n=2 Tax=Rhodospirillum rubrum RepID=G2T8Q4_RHORU (db=UNIREF evalue=6.7e-95 bit_score=353.6 identity=40.9 coverage=97.1252566735113)
AMDSBA1_26_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6781..7953
DNA (1173bp) protein (391aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXZ8_9FIRM (db=UNIREF evalue=8.5e-101 bit_score=372.9 identity=52.7 coverage=87.46803069053708)
AMDSBA1_26_10
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(7878..10229)
DNA (2352bp) protein (784aa)
peptidase S45, penicillin amidase
Peptidase S45 penicillin amidase n=1 Tax=Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 RepID=D7AVX7_NOCDD (db=UNIREF evalue=3.7e-63 bit_score=248.8 identity=30.2 coverage=68.49489795918367)
N-terminal nucleophile aminohydrolases (Ntn hydrolases) (db=superfamily db_id=SSF56235 from=45 to=757 evalue=1.3e-177)
(db=HMMPfam db_id=PF01804 from=54 to=753 evalue=4.2e-136 interpro_id=IPR002692 interpro_description=Peptidase S45, penicillin amidase GO=Molecular Function: hydrolase activity (GO:0016787), Biological Process: antibiotic biosynthetic process (GO:0017000))
AMDSBA1_26_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10438..11010
DNA (573bp) protein (191aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TT52_9FIRM (db=UNIREF evalue=2.2e-54 bit_score=217.6 identity=60.3 coverage=91.62303664921467)
transmembrane_regions (db=TMHMM db_id=tmhmm from=150 to=172)
seg (db=Seg db_id=seg from=161 to=169)
AMDSBA1_26_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11198..11866
DNA (669bp) protein (223aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=185 to=207)
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=178)
DNAJ/HSP40 (db=HMMPanther db_id=PTHR11821 from=6 to=65 evalue=2.4e-13)
gb def: DnaJ-related protein (db=HMMPanther db_id=PTHR11821:SF43 from=6 to=65 evalue=2.4e-13)
AMDSBA1_26_13
R_Gammaproteobacteria_60_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12018..12770
DNA (753bp) protein (251aa)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=209 evalue=3.9e-31)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=4 to=240 evalue=2.2e-28)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR22916 from=14 to=213 evalue=7.3e-16)
(db=HMMPfam db_id=PF00535 from=7 to=131 evalue=2.2e-15 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
AMDSBA1_26_14
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12914..14182)
DNA (1269bp) protein (423aa)
major facilitator superfamily protein
major facilitator superfamily protein n=1 Tax=Corynebacterium nuruki S6-4 RepID=UPI0002485A4F (db=UNIREF evalue=6.3e-57 bit_score=227.3 identity=35.4 coverage=87.47044917257683)
transmembrane_regions (db=TMHMM db_id=tmhmm from=263 to=285)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=316)
AMDSBA1_26_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14297..15277
DNA (981bp) protein (327aa)
aldo/keto reductase (EC:1.1.1.65)
aldo/keto reductase (EC:1.1.1.65)
Related to pyridoxine 4-dehydrogenase n=1 Tax=Piriformospora indica DSM 11827 RepID=G4TF72_PIRID (db=UNIREF evalue=3.5e-63 bit_score=247.7 identity=44.4 coverage=95.71865443425077)
ALDO/KETO REDUCTASE (db=HMMPanther db_id=PTHR11732:SF12 from=1 to=280 evalue=8.6e-113)
AMDSBA1_26_16
unknown

Not on your lists

comp(15360..16706)
DNA (1347bp) protein (449aa)
seg (db=Seg db_id=seg from=410 to=435)
seg (db=Seg db_id=seg from=62 to=78)
seg (db=Seg db_id=seg from=5 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
AMDSBA1_26_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16981..17211
DNA (231bp) protein (77aa)
16981..17211 + ( gc_cont=0.511)
hypothetical protein
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWK7_SULAD
Uncharacterized protein {ECO:0000313|EMBL:AEW05996.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
AMDSBA1_26_18
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17433..17609)
DNA (177bp) protein (59aa)
17433..17609 - ( gc_cont=0.576)
Transposase {ECO:0000313|EMBL:ABE53154.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (
AMDSBA1_26_19
unknown

Not on your lists

comp(17606..17833)
DNA (228bp) protein (76aa)
17606..17833 - ( gc_cont=0.566)
AMDSBA1_26_20
Cohnella sp. VKM B-2846, Cohnella, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18020..18811
DNA (792bp) protein (264aa)
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
Short-chain dehydrogenase/reductase SDR n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U0D5_9RHOB (db=UNIREF evalue=1.8e-38 bit_score=165.2 identity=38.2 coverage=94.6969696969697)
seg (db=Seg db_id=seg from=14 to=29)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=4 to=247 evalue=1.9e-62)
AMDSBA1_26_21
unknown

Not on your lists

comp(19192..20034)
DNA (843bp) protein (281aa)
seg (db=Seg db_id=seg from=215 to=236)
seg (db=Seg db_id=seg from=137 to=153)
seg (db=Seg db_id=seg from=70 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=246 to=265)
AMDSBA1_26_22
Pseudomonas sp. FH4, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20329..20727
DNA (399bp) protein (133aa)
transcriptional regulator
seg (db=Seg db_id=seg from=37 to=48)
CheY-like (db=superfamily db_id=SSF52172 from=1 to=129 evalue=3.1e-21 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=3 to=125 evalue=1.3e-17)
AMDSBA1_26_23
Thermotoga petrophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(20799..21707)
DNA (909bp) protein (303aa)
PAS/PAC sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase n=2 Tax=Geobacillus thermoglucosidasius RepID=F8CTF8_BACTR (db=UNIREF evalue=3.8e-08 bit_score=64.7 identity=26.0 coverage=59.07590759075908)
TWO COMPONENT HISTIDINE KINASE (SPORULATION KINASE) (db=HMMPanther db_id=PTHR23283:SF24 from=93 to=300 evalue=4.5e-44)
seg (db=Seg db_id=seg from=28 to=45)
AMDSBA1_26_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21867..22886
DNA (1020bp) protein (340aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Corallococcus coralloides DSM 2259 RepID=H8MTP0_CORCM (db=UNIREF evalue=9.5e-56 bit_score=223.0 identity=41.2 coverage=97.05882352941177)
seg (db=Seg db_id=seg from=248 to=260)
Carbon-nitrogen hydrolase (db=superfamily db_id=SSF56317 from=1 to=317 evalue=1.9e-13 interpro_id=IPR003010 interpro_description=Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase GO=Biological Process: nitrogen compound metabolic process (GO:0006807), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
AMDSBA1_26_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23226..24722
DNA (1497bp) protein (499aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TUE0_9FIRM (db=UNIREF evalue=3.5e-139 bit_score=500.7 identity=49.3 coverage=98.79759519038076)
AMDSBA1_26_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24982..25581
DNA (600bp) protein (200aa)
HNH endonuclease n=2 Tax=Sulfobacillus acidophilus RepID=G8TUE1_9FIRM (db=UNIREF evalue=4.4e-69 bit_score=266.5 identity=66.3 coverage=93.0)
seg (db=Seg db_id=seg from=135 to=146)
no description (db=HMMSmart db_id=SM00507 from=56 to=105 evalue=9.2e-12 interpro_id=IPR003615 interpro_description=HNH nuclease)
(db=HMMPfam db_id=PF01844 from=68 to=107 evalue=6.1e-06 interpro_id=IPR002711 interpro_description=HNH endonuclease GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: endonuclease activity (GO:0004519))
AMDSBA1_26_27
unknown

Not on your lists

comp(25584..26024)
DNA (441bp) protein (147aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=12 to=22)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=16 evalue=6.0)
AMDSBA1_26_28
unknown

Not on your lists

comp(26021..26269)
DNA (249bp) protein (83aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
seg (db=Seg db_id=seg from=32 to=43)
AMDSBA1_26_29
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

27247..28083
DNA (837bp) protein (279aa)
Putative uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRK3_9CHLR (db=UNIREF evalue=7.7e-104 bit_score=382.5 identity=64.0 coverage=98.9247311827957)
hypothetical protein
hypothetical protein
AMDSBA1_26_30
unknown

Not on your lists

28156..28692
DNA (537bp) protein (179aa)
seg (db=Seg db_id=seg from=131 to=136)
Displaying items 1-30 of 45 in total

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