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AMDSBA1_27

Alias: AMDSBA1_C26

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_27_1
unknown

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2..508
-----------------
DNA (507bp)
protein (169aa)
seg (db=Seg db_id=seg from=23 to=44)
AMDSBA1_27_2
Paenibacillus sp. FSL P4-0081, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1455..2477
-----------------
DNA (1023bp)
protein (341aa)
1455..2477 + ( gc_cont=0.522)
transposase
Transposase {ECO:0000313|EMBL:AIQ31526.1}; TaxID=1536769 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL P4-0081.;"
Transposase-like protein n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7W2A3_PAETH
AMDSBA1_27_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2692..4506)
-----------------
DNA (1815bp)
protein (605aa)
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glucosamine--fructose-6-phosphate aminotransferase, isomerizing n=1 Tax=Methanococcus aeolicus Nankai-3 RepID=A6UVU4_META3 (db=UNIREF evalue=4.7e-114 bit_score=417.5 identity=38.1 coverage=99.6694214876033)
AMDSBA1_27_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4703..6043)
-----------------
DNA (1341bp)
protein (447aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) RepID=GLMM_RUTMC (db=UNIREF evalue=7.0e-83 bit_score=313.5 identity=39.8 coverage=97.53914988814317)
seg (db=Seg db_id=seg from=337 to=345)
PGM_PMM (db=PatternScan db_id=PS00710 from=90 to=99 evalue=0.0 interpro_id=IPR016066 interpro_description=Alpha-D-phosphohexomutase, conserved site GO=Molecular Function: magnesium ion binding (GO:0000287))
AMDSBA1_27_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6100..7038)
-----------------
DNA (939bp)
protein (313aa)
hypothetical protein
YbbR-like n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NUG1_9DELT (db=UNIREF evalue=8.0e-09 bit_score=67.0 identity=22.1 coverage=95.52715654952077)
seg (db=Seg db_id=seg from=111 to=123)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
AMDSBA1_27_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7038..7895)
-----------------
DNA (858bp)
protein (286aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYH0_9FIRM (db=UNIREF evalue=8.4e-114 bit_score=415.6 identity=76.0 coverage=94.4055944055944)
hypothetical protein
hypothetical protein
AMDSBA1_27_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8024..9703
-----------------
DNA (1680bp)
protein (560aa)
ABC transporter
Putative ABC1 family protein n=2 Tax=environmental samples RepID=B3T391_9ARCH (db=UNIREF evalue=1.6e-60 bit_score=239.6 identity=31.9 coverage=74.64285714285714)
transmembrane_regions (db=TMHMM db_id=tmhmm from=531 to=553)
seg (db=Seg db_id=seg from=380 to=401)
AMDSBA1_27_8
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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9873..11336
-----------------
DNA (1464bp)
protein (488aa)
ferredoxin-dependent glutamate synthase
ferredoxin-dependent glutamate synthase
FMN-dependent alpha-hydroxy acid dehydrogenase:ferredoxin-dependent glutamate synthase n=1 Tax=Desmospora sp. 8437 RepID=F5SFE6_9BACL (db=UNIREF evalue=6.7e-95 bit_score=353.6 identity=43.5 coverage=87.29508196721312)
AMDSBA1_27_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11337..12221)
-----------------
DNA (885bp)
protein (295aa)
drug/metabolite exporter family transporter
Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TTJ9_9PROT (db=UNIREF evalue=1.6e-14 bit_score=85.9 identity=25.7 coverage=92.54237288135593)
transmembrane_regions (db=TMHMM db_id=tmhmm from=113 to=135)
transmembrane_regions (db=TMHMM db_id=tmhmm from=145 to=162)
AMDSBA1_27_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12218..12856)
-----------------
DNA (639bp)
protein (213aa)
redox-sensing transcriptional repressor rex
Redox-sensing transcriptional repressor rex n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=REX_NATTJ (db=UNIREF evalue=3.6e-37 bit_score=160.6 identity=43.4 coverage=92.95774647887323)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=72 to=206 evalue=4.8e-29 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=76 to=207 evalue=1.0e-22)
AMDSBA1_27_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12884..13849)
-----------------
DNA (966bp)
protein (322aa)
Trans-hexaprenyltranstransferase (EC:2.5.1.30)
Trans-hexaprenyltranstransferase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GKV9_9FIRM (db=UNIREF evalue=8.7e-51 bit_score=206.5 identity=39.1 coverage=98.13664596273291)
seg (db=Seg db_id=seg from=109 to=124)
POLYPRENYL_SYNTHASE_1 (db=PatternScan db_id=PS00723 from=82 to=96 evalue=0.0 interpro_id=IPR000092 interpro_description=Polyprenyl synthetase GO=Biological Process: isoprenoid biosynthetic process (GO:0008299))
AMDSBA1_27_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13945..15366)
-----------------
DNA (1422bp)
protein (474aa)
NADH dehydrogenase subunit N (EC:1.6.5.3)
Putative antiporter subunit mnhD2 n=2 Tax=Staphylococcus saprophyticus subsp. saprophyticus RepID=MNHD2_STAS1 (db=UNIREF evalue=1.3e-26 bit_score=126.7 identity=24.8 coverage=82.0675105485232)
transmembrane_regions (db=TMHMM db_id=tmhmm from=191 to=213)
transmembrane_regions (db=TMHMM db_id=tmhmm from=233 to=255)
AMDSBA1_27_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15363..16805)
-----------------
DNA (1443bp)
protein (481aa)
NADH dehydrogenase subunit M (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Rhizophydium sp. 136 RepID=Q950M6_9FUNG (db=UNIREF evalue=2.7e-48 bit_score=198.7 identity=29.7 coverage=80.66528066528068)
seg (db=Seg db_id=seg from=395 to=409)
transmembrane_regions (db=TMHMM db_id=tmhmm from=152 to=174)
AMDSBA1_27_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16846..18711)
-----------------
DNA (1866bp)
protein (622aa)
NADH dehydrogenase subunit L (EC:1.6.5.3)
NADH dehydrogenase subunit L n=2 Tax=Sulfobacillus acidophilus RepID=G8TYH7_9FIRM (db=UNIREF evalue=2.8e-255 bit_score=886.7 identity=69.5 coverage=99.67845659163987)
seg (db=Seg db_id=seg from=423 to=437)
transmembrane_regions (db=TMHMM db_id=tmhmm from=88 to=110)
AMDSBA1_27_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18766..19068)
-----------------
DNA (303bp)
protein (101aa)
NADH dehydrogenase subunit K (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K n=2 Tax=Sulfobacillus acidophilus RepID=G8TYH8_9FIRM (db=UNIREF evalue=1.6e-35 bit_score=154.1 identity=76.0 coverage=94.05940594059405)
seg (db=Seg db_id=seg from=41 to=50)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
AMDSBA1_27_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19065..19652)
-----------------
DNA (588bp)
protein (196aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BTQ5_9GAMM (db=UNIREF evalue=2.2e-12 bit_score=78.2 identity=32.2 coverage=89.28571428571429)
seg (db=Seg db_id=seg from=165 to=178)
seg (db=Seg db_id=seg from=64 to=74)
AMDSBA1_27_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19667..20104)
-----------------
DNA (438bp)
protein (146aa)
nuoI; NADH dehydrogenase I subunit I
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=55 to=66 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=100 to=111 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
NuoI: NADH-quinone oxidoreductase, chain I (db=HMMTigr db_id=TIGR01971 from=11 to=138 evalue=3.3e-45 interpro_id=IPR010226 interpro_description=NADH-quinone oxidoreductase, chain I GO=Cellular Component: membrane (GO:0016020), Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA1_27_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20208..21197)
-----------------
DNA (990bp)
protein (330aa)
NADH dehydrogenase subunit H (EC:1.6.5.3)
NADH dehydrogenase subunit H (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit H 2 n=2 Tax=Sulfobacillus acidophilus RepID=G8TYI1_9FIRM (db=UNIREF evalue=7.6e-151 bit_score=538.9 identity=80.7 coverage=98.48484848484848)
transmembrane_regions (db=TMHMM db_id=tmhmm from=152 to=174)
AMDSBA1_27_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21194..23518)
-----------------
DNA (2325bp)
protein (775aa)
NADH dehydrogenase subunit G (EC:1.6.5.3)
NADH dehydrogenase subunit G n=2 Tax=Helicobacter cinaedi RepID=E4VL08_9HELI (db=UNIREF evalue=4.9e-07 bit_score=62.4 identity=21.6 coverage=39.35483870967742)
seg (db=Seg db_id=seg from=173 to=183)
seg (db=Seg db_id=seg from=601 to=613)
AMDSBA1_27_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23499..24791)
-----------------
DNA (1293bp)
protein (431aa)
NADH dehydrogenase subunit F (EC:1.6.5.3)
NADH dehydrogenase subunit F (EC:1.6.5.3)
NADH dehydrogenase (Quinone) n=4 Tax=Mobiluncus mulieris RepID=C2KMN4_9ACTO (db=UNIREF evalue=3.4e-111 bit_score=407.5 identity=52.9 coverage=88.63109048723898)
AMDSBA1_27_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24788..25264)
-----------------
DNA (477bp)
protein (159aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
NADH dehydrogenase subunit E n=2 Tax=Sulfobacillus acidophilus RepID=G8TYI4_9FIRM (db=UNIREF evalue=6.6e-60 bit_score=235.7 identity=72.2 coverage=97.48427672955975)
seg (db=Seg db_id=seg from=141 to=152)
seg (db=Seg db_id=seg from=115 to=127)
AMDSBA1_27_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25261..26469)
-----------------
DNA (1209bp)
protein (403aa)
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-ubiquinone oxidoreductase 49 kDa subunit n=2 Tax=Nyctotherus ovalis RepID=NDUS2_NYCOV (db=UNIREF evalue=3.4e-52 bit_score=211.5 identity=32.1 coverage=95.28535980148884)
NuoD: NADH dehydrogenase (quinone), D subuni (db=HMMTigr db_id=TIGR01962 from=16 to=402 evalue=1.4e-231 interpro_id=IPR010219 interpro_description=NADH dehydrogenase I, subunit D GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA1_27_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26481..26942)
-----------------
DNA (462bp)
protein (154aa)
nuoC; NADH-quinone oxidoreductase chain c 2
NAD(P)H-quinone oxidoreductase subunit J n=1 Tax=Prochlorococcus marinus str. MIT 9211 RepID=NDHJ_PROM4 (db=UNIREF evalue=1.1e-11 bit_score=75.5 identity=44.0 coverage=51.94805194805194)
COMPLEX1_30K (db=PatternScan db_id=PS00542 from=110 to=131 evalue=0.0 interpro_id=IPR020396 interpro_description=NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Biological Process: oxidation-reduction process (GO:0055114))
NuoC_fam: NADH (or F420H2) dehydrogenase, su (db=HMMTigr db_id=TIGR01961 from=29 to=149 evalue=2.5e-57 interpro_id=IPR010218 interpro_description=NADH dehydrogenase, subunit C GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA1_27_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26939..27457)
-----------------
DNA (519bp)
protein (173aa)
NADH-quinone oxidoreductase subunit 6 n=9 Tax=Thermaceae RepID=NQO6_THET8 (db=UNIREF evalue=8.8e-58 bit_score=228.8 identity=68.2 coverage=84.97109826589595)
COMPLEX1_20K (db=PatternScan db_id=PS01150 from=121 to=137 evalue=0.0 interpro_id=IPR006138 interpro_description=NADH-ubiquinone oxidoreductase, 20 Kd subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
nuoB_fam: NADH-quinone oxidoreductase, B sub (db=HMMTigr db_id=TIGR01957 from=13 to=156 evalue=3.2e-101 interpro_id=IPR006138 interpro_description=NADH-ubiquinone oxidoreductase, 20 Kd subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
NADH DEHYDROGENASE (db=HMMPanther db_id=PTHR11995 from=7 to=153 evalue=1.0e-90 interpro_id=IPR014406 interpro_description=[NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA1_27_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27448..27801)
-----------------
DNA (354bp)
protein (118aa)
NADH-quinone oxidoreductase subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8TYI8_9FIRM (db=UNIREF evalue=3.4e-45 bit_score=186.4 identity=76.3 coverage=98.30508474576271)
NADH dehydrogenase subunit A (EC:1.6.5.3)
NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3 (PROKARYOTIC AND PLANT) (db=HMMPanther db_id=PTHR11058:SF4 from=11 to=117 evalue=3.5e-25)
seg (db=Seg db_id=seg from=89 to=106)
AMDSBA1_27_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27992..28858)
-----------------
DNA (867bp)
protein (289aa)
sporulation regulator WhiA
Putative sporulation transcription regulator WhiA n=1 Tax=Desulfotomaculum ruminis DSM 2154 RepID=F6DNB3_DESRL (db=UNIREF evalue=1.2e-35 bit_score=156.0 identity=35.3 coverage=94.11764705882352)
(db=HMMPfam db_id=PF02650 from=102 to=277 evalue=2.0e-55 interpro_id=IPR023054 interpro_description=Sporulation regulator WhiA, C-terminal)
MG103: conserved hypothetical protein (db=HMMTigr db_id=TIGR00647 from=3 to=281 evalue=5.3e-33 interpro_id=IPR003802 interpro_description=Sporulation regulator WhiA)
AMDSBA1_27_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28819..30153)
-----------------
DNA (1335bp)
protein (445aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Bacillus cereus Rock3-44 RepID=C2WEA2_BACCE (db=UNIREF evalue=8.3e-76 bit_score=290.0 identity=50.3 coverage=69.88764044943821)
seg (db=Seg db_id=seg from=127 to=140)
AMDSBA1_27_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30155..31024)
-----------------
DNA (870bp)
protein (290aa)
hypothetical protein
UPF0042 nucleotide-binding protein jk1004 n=2 Tax=Corynebacterium jeikeium RepID=Y1004_CORJK (db=UNIREF evalue=6.0e-51 bit_score=206.8 identity=38.7 coverage=96.20689655172414)
seg (db=Seg db_id=seg from=221 to=234)
coiled-coil (db=Coil db_id=coil from=110 to=131 evalue=NA)
AMDSBA1_27_29
unknown

Not on your lists

31170..31412
-----------------
DNA (243bp)
protein (81aa)
seg (db=Seg db_id=seg from=16 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=41 to=63)
AMDSBA1_27_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31374..32222)
-----------------
DNA (849bp)
protein (283aa)
Cof-like hydrolase n=2 Tax=Sulfobacillus acidophilus RepID=G8TYJ3_9FIRM (db=UNIREF evalue=5.4e-73 bit_score=280.0 identity=52.3 coverage=98.23321554770318)
cof family hydrolase
seg (db=Seg db_id=seg from=154 to=166)
COF_2 (db=PatternScan db_id=PS01229 from=220 to=242 evalue=0.0 interpro_id=IPR000150 interpro_description=Cof protein GO=Biological Process: metabolic process (GO:0008152), Molecular Function: hydrolase activity (GO:0016787))
Displaying items 1-30 of 41 in total

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