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AMDSBA1_28

Alias: AMDSBA1_C27

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Displaying items 31-42 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_28_31
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32762..34222)
DNA (1461bp) protein (487aa)
glutamyl-tRNA(Gln) amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=28 Tax=Bacillus RepID=GATA_BACA2 (db=UNIREF evalue=4.7e-141 bit_score=506.9 identity=54.6 coverage=96.71457905544148)
seg (db=Seg db_id=seg from=149 to=170)
AMDSBA1_28_32
R_NC10_66_22, NC10, Bacteria

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comp(34223..34522)
DNA (300bp) protein (100aa)
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=GATC_SYNWW (db=UNIREF evalue=1.9e-12 bit_score=77.4 identity=39.4 coverage=93.0)
Glu-tRNAGln amidotransferase C subunit (db=superfamily db_id=SSF141000 from=2 to=93 evalue=5.3e-31)
gatC: glutamyl-tRNA(Gln) and/or aspartyl-tRN (db=HMMTigr db_id=TIGR00135 from=3 to=95 evalue=1.1e-28 interpro_id=IPR003837 interpro_description=Glu-tRNAGln amidotransferase, C subunit GO=Biological Process: regulation of translational fidelity (GO:0006450))
AMDSBA1_28_33
unknown

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34820..35200
DNA (381bp) protein (127aa)
seg (db=Seg db_id=seg from=11 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=26)
AMDSBA1_28_34
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35241..36233)
DNA (993bp) protein (331aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Mannoside ABC transport system ATP-binding protein 1 n=1 Tax=Thermococcus sp. AM4 RepID=B7QZN4_9EURY (db=UNIREF evalue=4.3e-53 bit_score=214.2 identity=37.7 coverage=89.72809667673715)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=15 to=329 evalue=2.0e-173)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=165 to=179 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
AMDSBA1_28_35
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36230..37240)
DNA (1011bp) protein (337aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
ABC-type dipeptide/oligopeptide/nickel transport systems, ATP-binding protein I & II n=1 Tax=Haloferax mediterranei ATCC 33500 RepID=I3R5P3_HALME (db=UNIREF evalue=4.7e-55 bit_score=220.7 identity=36.7 coverage=95.25222551928783)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=6 to=322 evalue=5.9e-168)
AMDSBA1_28_36
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37407..39452)
DNA (2046bp) protein (682aa)
ligA; NAD-dependent DNA ligase
DNA ligase n=2 Tax=Acidovorax RepID=DNLJ_ACIAC (db=UNIREF evalue=8.0e-54 bit_score=217.6 identity=43.5 coverage=39.44281524926686)
BRCT DOMAIN-CONTAINING PROTEIN (db=HMMPanther db_id=PTHR11107 from=1 to=675 evalue=0.0)
DNA LIGASE, NAD-DEPENDENT (db=HMMPanther db_id=PTHR11107:SF5 from=1 to=675 evalue=0.0)
AMDSBA1_28_37
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39452..41587)
DNA (2136bp) protein (712aa)
uvrD; ATP-dependent DNA helicase PcrA
DNA helicase II n=5 Tax=Synechocystis sp. PCC 6803 RepID=H0P3Y3_9SYNC (db=UNIREF evalue=1.3e-115 bit_score=422.9 identity=37.3 coverage=89.74719101123596)
seg (db=Seg db_id=seg from=318 to=331)
seg (db=Seg db_id=seg from=288 to=296)
AMDSBA1_28_38
unknown

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comp(41803..42111)
DNA (309bp) protein (103aa)
41803..42111 - ( gc_cont=0.472)
AMDSBA1_28_39
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42162..42458)
DNA (297bp) protein (99aa)
TrpR-like protein YerC/YecD
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7ANL6_9FIRM (db=UNIREF evalue=5.1e-18 bit_score=95.9 identity=51.0 coverage=95.95959595959596)
yecD_yerC: TrpR homolog YerC/YecD (db=HMMTigr db_id=TIGR02531 from=6 to=93 evalue=7.2e-37 interpro_id=IPR013368 interpro_description=TrpR homologue YerC/YecD)
TrpR-like (db=superfamily db_id=SSF48295 from=1 to=96 evalue=2.0e-25 interpro_id=IPR010921 interpro_description=Trp repressor/replication initiator GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
AMDSBA1_28_40
unknown

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42592..42858
DNA (267bp) protein (89aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
AMDSBA1_28_41
unknown

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42962..43213
DNA (252bp) protein (84aa)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=41 to=83 evalue=1.2e-07 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
AMDSBA1_28_42
unknown

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43859..43918
DNA (60bp) protein (20aa)
43859..43918 + ( gc_cont=0.533)
Displaying items 31-42 of 42 in total

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