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AMDSBA1_35

Alias: AMDSBA1_C34

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Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_35_1
unknown

Not on your lists

comp(3..611)
DNA (609bp) protein (203aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=44 to=65)
seg (db=Seg db_id=seg from=75 to=86)
AMDSBA1_35_2
unknown

Not on your lists

782..1243
DNA (462bp) protein (154aa)
seg (db=Seg db_id=seg from=4 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=115 to=137)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA1_35_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1246..1656)
DNA (411bp) protein (137aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ83_9FIRM (db=UNIREF evalue=1.7e-19 bit_score=101.3 identity=45.0 coverage=79.56204379562044)
seg (db=Seg db_id=seg from=9 to=26)
seg (db=Seg db_id=seg from=79 to=100)
AMDSBA1_35_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1974..2282
DNA (309bp) protein (103aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ84_9FIRM (db=UNIREF evalue=6.7e-37 bit_score=158.7 identity=78.4 coverage=92.23300970873787)
Fe-S cluster assembly (FSCA) domain-like (db=superfamily db_id=SSF117916 from=1 to=102 evalue=1.8e-34)
(db=HMMPfam db_id=PF01883 from=6 to=81 evalue=1.7e-27 interpro_id=IPR002744 interpro_description=Domain of unknown function DUF59)
AMDSBA1_35_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2303..3481
DNA (1179bp) protein (393aa)
ATPase-like, ParA/MinD n=2 Tax=Sulfobacillus acidophilus RepID=G8TZ85_9FIRM (db=UNIREF evalue=9.7e-129 bit_score=465.7 identity=62.0 coverage=94.65648854961832)
seg (db=Seg db_id=seg from=97 to=107)
Fe-S cluster assembly (FSCA) domain-like (db=superfamily db_id=SSF117916 from=1 to=99 evalue=2.3e-19)
AMDSBA1_35_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3507..3848)
DNA (342bp) protein (114aa)
Cupin 2 conserved barrel domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TZM6_9FIRM (db=UNIREF evalue=1.9e-45 bit_score=187.2 identity=75.2 coverage=98.24561403508771)
cupin
RmlC-like cupins (db=superfamily db_id=SSF51182 from=8 to=108 evalue=2.2e-19 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
(db=HMMPfam db_id=PF01050 from=3 to=103 evalue=1.2e-11 interpro_id=IPR001538 interpro_description=Mannose-6-phosphate isomerase, type II, C-terminal GO=Biological Process: polysaccharide metabolic process (GO:0005976), Molecular Function: nucleotidyltransferase activity (GO:0016779))
AMDSBA1_35_7
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(3903..4544)
DNA (642bp) protein (214aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=66 to=80)
seg (db=Seg db_id=seg from=5 to=20)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=23 to=211 evalue=3.9e-32)
AMDSBA1_35_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4787..5956)
DNA (1170bp) protein (390aa)
sqd1; UDP-sulfoquinovose synthase
NAD-dependent epimerase/dehydratase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8M925_CALMQ (db=UNIREF evalue=1.7e-77 bit_score=295.4 identity=41.5 coverage=96.92307692307692)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=5 to=379 evalue=3.8e-146)
UDP-SULFOQUINOVOSE SYNTHASE (db=HMMPanther db_id=PTHR10366:SF22 from=5 to=379 evalue=3.8e-146)
AMDSBA1_35_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6881..7573)
DNA (693bp) protein (231aa)
HAD superfamily hydrolase
HAD superfamily hydrolase n=2 Tax=Sulfobacillus acidophilus RepID=G8TYY1_9FIRM (db=UNIREF evalue=1.1e-31 bit_score=142.5 identity=35.1 coverage=97.40259740259741)
seg (db=Seg db_id=seg from=96 to=107)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=218 evalue=9.2e-25 interpro_id=IPR023214 interpro_description=HAD-like domain)
AMDSBA1_35_10
Bacillus badius, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7664..8587
DNA (924bp) protein (308aa)
czcD; cobalt-zinc-cadmium resistance protein
Cation efflux family protein n=1 Tax=Dehalococcoides ethenogenes 195 RepID=Q3ZAG2_DEHE1 (db=UNIREF evalue=6.4e-43 bit_score=180.3 identity=32.9 coverage=91.55844155844156)
seg (db=Seg db_id=seg from=1 to=11)
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=62)
AMDSBA1_35_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8646..9071
DNA (426bp) protein (142aa)
DtxR family iron (metal) dependent repressor
no description (db=HMMSmart db_id=SM00529 from=24 to=123 evalue=6.0e-24 interpro_id=IPR022689 interpro_description=Iron dependent repressor, diptheria toxin type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Molecular Function: iron ion binding (GO:0005506), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=73 evalue=8.3e-21 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
(db=HMMPfam db_id=PF01325 from=3 to=60 evalue=5.0e-20 interpro_id=IPR022687 interpro_description=Iron dependent repressor, N-terminal GO=Molecular Function: iron ion binding (GO:0005506))
AMDSBA1_35_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9712..10686
DNA (975bp) protein (325aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Caenorhabditis japonica RepID=H2WW71_CAEJA (db=UNIREF evalue=4.0e-19 bit_score=101.3 identity=31.5 coverage=68.3076923076923)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=152 to=166)
AMDSBA1_35_13
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10828..11460)
DNA (633bp) protein (211aa)
phospholipase/carboxylesterase family protein
Phospholipase/Carboxylesterase n=1 Tax=halophilic archaeon DL31 RepID=G2MKT3_9ARCH (db=UNIREF evalue=1.2e-11 bit_score=75.9 identity=26.9 coverage=90.99526066350711)
ACYL-PROTEIN THIOESTERASE 1,2 (LYSOPHOSPHOLIPASE I,II) (db=HMMPanther db_id=PTHR10655:SF6 from=104 to=207 evalue=4.2e-24)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=15 to=208 evalue=1.3e-40)
AMDSBA1_35_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11535..12005)
DNA (471bp) protein (157aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWM8_9FIRM (db=UNIREF evalue=2.8e-47 bit_score=193.7 identity=61.9 coverage=92.35668789808918)
seg (db=Seg db_id=seg from=114 to=143)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
AMDSBA1_35_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12460..13173)
DNA (714bp) protein (238aa)
chemotaxis protein CheR (EC:2.1.1.80)
MCP methyltransferase, CheR-type n=2 Tax=Sulfobacillus acidophilus RepID=G8TSI8_9FIRM (db=UNIREF evalue=3.7e-46 bit_score=190.7 identity=43.8 coverage=96.63865546218487)
(db=HMMPfam db_id=PF01739 from=52 to=220 evalue=2.1e-34 interpro_id=IPR022642 interpro_description=MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=50 to=236 evalue=6.6e-34)
AMDSBA1_35_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13232..14239)
DNA (1008bp) protein (336aa)
response regulator receiver modulated CheB methylesterase
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZR46_THELI (db=UNIREF evalue=1.8e-43 bit_score=182.2 identity=33.2 coverage=95.53571428571429)
RECEPTOR HISTIDINE KINASE (DHKB, DHKE) (db=HMMPanther db_id=PTHR23283:SF42 from=4 to=122 evalue=6.6e-16)
Chemotaxis response regulator methylesterase, CheB type (db=HMMPIR db_id=PIRSF000876 from=2 to=335 evalue=2.3e-68 interpro_id=IPR008248 interpro_description=Signal transduction response regulator, chemotaxis, CheB GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Cellular Component: cytoplasm (GO:0005737), Biological Process: chemotaxis (GO:0006935), Molecular Function: protein-glutamate me
AMDSBA1_35_17
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14283..14636)
DNA (354bp) protein (118aa)
response regulator receiver protein
Uncharacterized protein n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SD80_9BACL (db=UNIREF evalue=1.8e-09 bit_score=67.8 identity=32.2 coverage=96.61016949152543)
no description (db=HMMSmart db_id=SM00448 from=1 to=112 evalue=5.4e-40 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
CheY-like (db=superfamily db_id=SSF52172 from=1 to=117 evalue=4.2e-39 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
AMDSBA1_35_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14633..15217)
DNA (585bp) protein (195aa)
chemotaxis protein CheC
CheC-like (db=superfamily db_id=SSF103039 from=13 to=179 evalue=1.8e-21)
no description (db=Gene3D db_id=G3DSA:3.40.1550.10 from=5 to=179 evalue=7.7e-18)
Chemotaxis signal transduction protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I244_SULAT
AMDSBA1_35_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15233..16261)
DNA (1029bp) protein (343aa)
putative metal dependent phosphohydrolase
Metal dependent phosphohydrolase n=1 Tax=Caldicellulosiruptor hydrothermalis 108 RepID=E4Q7F5_CALH1 (db=UNIREF evalue=1.1e-14 bit_score=86.7 identity=23.4 coverage=91.54518950437318)
seg (db=Seg db_id=seg from=278 to=292)
Metal dependent phosphohydrolase {ECO:0000313|EMBL:AEJ40644.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" sour
AMDSBA1_35_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16242..18959)
DNA (2718bp) protein (906aa)
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase
CheA Signal Transduction Histidine Kinases (STHK) n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YZI8_LYNSP (db=UNIREF evalue=3.3e-47 bit_score=196.1 identity=28.7 coverage=52.64900662251656)
seg (db=Seg db_id=seg from=230 to=241)
AMDSBA1_35_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18956..19393)
DNA (438bp) protein (146aa)
CheW domain-containing protein
seg (db=Seg db_id=seg from=72 to=92)
seg (db=Seg db_id=seg from=31 to=42)
(db=HMMPfam db_id=PF01584 from=2 to=122 evalue=1.1e-23 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
AMDSBA1_35_22
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19406..21406)
DNA (2001bp) protein (667aa)
methyl-accepting chemotaxis sensory transducer
coiled-coil (db=Coil db_id=coil from=643 to=664 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=192 to=214)
seg (db=Seg db_id=seg from=334 to=345)
AMDSBA1_35_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21577..21801)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TXY0_9FIRM (db=UNIREF evalue=1.9e-12 bit_score=77.0 identity=54.1 coverage=96.0)
seg (db=Seg db_id=seg from=2 to=13)
(db=HMMPfam db_id=PF07561 from=6 to=71 evalue=4.7e-13 interpro_id=IPR011437 interpro_description=Domain of unknown function DUF1540)
hypothetical protein
AMDSBA1_35_24
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21965..23284)
DNA (1320bp) protein (440aa)
cytosol aminopeptidase (LAP) (Leucyl aminopeptidase) PepA (EC:3.4.11.1)
Probable cytosol aminopeptidase n=2 Tax=Sulfobacillus acidophilus RepID=F8I5Z0_SULAT (db=UNIREF evalue=4.1e-59 bit_score=234.6 identity=35.8 coverage=88.4090909090909)
seg (db=Seg db_id=seg from=233 to=249)
CYTOSOL_AP (db=PatternScan db_id=PS00631 from=291 to=298 evalue=0.0 interpro_id=IPR000819 interpro_description=Peptidase M17, leucyl aminopeptidase, C-terminal GO=Molecular Function: aminopeptidase activity (GO:0004177), Cellular Component: intracellular (GO:0005622), Biological Process: proteolysis (GO:0006508))
AMDSBA1_35_25
unknown

Not on your lists

comp(23438..23905)
DNA (468bp) protein (156aa)
seg (db=Seg db_id=seg from=91 to=109)
AMDSBA1_35_26
unknown

Not on your lists

25248..25616
DNA (369bp) protein (123aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=70)
transmembrane_regions (db=TMHMM db_id=tmhmm from=77 to=99)
seg (db=Seg db_id=seg from=55 to=70)
AMDSBA1_35_27
unknown

Not on your lists

comp(25613..26308)
DNA (696bp) protein (232aa)
25613..26308 - ( gc_cont=0.527)
AMDSBA1_35_28
GWF2_Planctomycetes_50_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(26726..27124)
DNA (399bp) protein (133aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Methanocaldococcus infernus ME RepID=D5VSD1_METIM (db=UNIREF evalue=1.1e-28 bit_score=131.7 identity=46.8 coverage=93.23308270676691)
YjbQ-like (db=superfamily db_id=SSF111038 from=1 to=132 evalue=1.5e-41 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
TIGR00149_YbjQ: secondary thiamine-pho (db=HMMTigr db_id=TIGR00149 from=2 to=132 evalue=2.5e-41 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
AMDSBA1_35_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27426..28670
DNA (1245bp) protein (415aa)
major facilitator superfamily protein
major facilitator superfamily protein
Putative uncharacterized protein n=1 Tax=Sulfolobus tokodaii str. 7 RepID=Q96XI6_SULTO (db=UNIREF evalue=1.5e-18 bit_score=99.8 identity=24.9 coverage=86.02409638554217)
seg (db=Seg db_id=seg from=361 to=374)
AMDSBA1_35_30
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28693..29259)
DNA (567bp) protein (189aa)
plasmid pRiA4b ORF-3 family protein
Plasmid pRiA4b ORF-3 family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SM50_9DELT (db=UNIREF evalue=4.8e-25 bit_score=120.2 identity=39.1 coverage=85.18518518518519)
(db=HMMPfam db_id=PF07929 from=7 to=179 evalue=5.7e-51 interpro_id=IPR012912 interpro_description=Plasmid pRiA4b, Orf3)
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:ADG07572.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DS
Displaying items 1-30 of 40 in total

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