Alias: AMDSBA1_C38
| name | lists | location/seqs | functional annotations | notes |
|---|---|---|---|---|
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AMDSBA1_39_1
unknown
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Not on your lists |
comp(513..734)
----------------- DNA (222bp) protein (74aa) |
513..734 - ( gc_cont=0.550)
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AMDSBA1_39_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
1649..3544
----------------- DNA (1896bp) protein (632aa) |
hypothetical protein
hypothetical protein
seg (db=Seg db_id=seg from=5 to=18)
seg (db=Seg db_id=seg from=286 to=309)
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AMDSBA1_39_3
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
4291..5580
----------------- DNA (1290bp) protein (430aa) |
amidohydrolase
amidohydrolase
Cytosine deaminase n=1 Tax=Marinobacter sp. ELB17 RepID=A3JFI4_9ALTE (db=UNIREF evalue=1.6e-84 bit_score=318.9 identity=42.6 coverage=94.18604651162791)
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AMDSBA1_39_4
Vibrio fortis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(5800..7311)
----------------- DNA (1512bp) protein (504aa) |
sensor histidine kinase
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor n=2 Tax=Pseudovibrio RepID=B6R9S7_9RHOB (db=UNIREF evalue=4.3e-12 bit_score=78.6 identity=30.8 coverage=38.69047619047619)
GGDEF: diguanylate cyclase (GGDEF) domain (db=HMMTigr db_id=TIGR00254 from=337 to=497 evalue=1.0e-28 interpro_id=IPR000160 interpro_description=Diguanylate cyclase, predicted)
Nucleotide cyclase (db=superfamily db_id=SSF55073 from=346 to=499 evalue=3.6e-41 interpro_id=IPR001054 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signal transduction (GO:0035556))
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AMDSBA1_39_5
Cellulomonas bogoriensis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(7348..7707)
----------------- DNA (360bp) protein (120aa) |
hypothetical protein
Uncharacterized protein n=1 Tax=Actinoplanes sp. SE50/110 RepID=G8S719_ACTS5 (db=UNIREF evalue=1.2e-10 bit_score=71.6 identity=33.9 coverage=96.66666666666667)
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AMDSBA1_39_6
unknown
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Not on your lists |
7741..8322
----------------- DNA (582bp) protein (194aa) |
seg (db=Seg db_id=seg from=118 to=133)
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AMDSBA1_39_7
unknown
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Not on your lists |
8346..8855
----------------- DNA (510bp) protein (170aa) |
8346..8855 + ( gc_cont=0.549)
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AMDSBA1_39_8
unknown
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Not on your lists |
8833..9207
----------------- DNA (375bp) protein (125aa) |
8833..9207 + ( gc_cont=0.541)
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AMDSBA1_39_9
unknown
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Not on your lists |
comp(9118..9597)
----------------- DNA (480bp) protein (160aa) |
9118..9597 - ( gc_cont=0.512)
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AMDSBA1_39_10
Geobacillus sp. GHH01, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(9916..10221)
----------------- DNA (306bp) protein (102aa) |
seg (db=Seg db_id=seg from=14 to=26)
Rhodanese/Cell cycle control phosphatase (db=superfamily db_id=SSF52821 from=5 to=95 evalue=3.9e-24 interpro_id=IPR001763 interpro_description=Rhodanese-like)
no description (db=Gene3D db_id=G3DSA:3.40.250.10 from=12 to=95 evalue=5.3e-20 interpro_id=IPR001763 interpro_description=Rhodanese-like)
no description (db=HMMSmart db_id=SM00450 from=7 to=101 evalue=3.4e-14 interpro_id=IPR001763 interpro_description=Rhodanese-like)
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AMDSBA1_39_11
GWA1_OP11_Woesebacteria_41_8_curated, Woesebacteria, Microgenomates, Bacteria
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Not on your lists |
comp(10773..11612)
----------------- DNA (840bp) protein (280aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
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AMDSBA1_39_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(12422..14137)
----------------- DNA (1716bp) protein (572aa) |
ABC transporter periplasmic protein
ABC-type transporter, periplasmic subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8U1D8_9FIRM (db=UNIREF evalue=5.6e-117 bit_score=427.2 identity=40.1 coverage=98.07692307692307)
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=30 to=571 evalue=8.6e-78)
(db=HMMPfam db_id=PF00496 from=86 to=482 evalue=3.4e-54 interpro_id=IPR000914 interpro_description=Bacterial extracellular solute-binding protein, family 5 GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810))
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AMDSBA1_39_13
Thermoplasmatales archaeon Gpl, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea
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Not on your lists |
14587..15243
----------------- DNA (657bp) protein (219aa) |
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=1 to=200 evalue=2.4e-09)
no description (db=HMMSmart db_id=SM00849 from=22 to=196 evalue=0.0057 interpro_id=IPR001279 interpro_description=Beta-lactamase-like GO=Molecular Function: hydrolase activity (GO:0016787))
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AMDSBA1_39_14
unknown
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Not on your lists |
16701..17495
----------------- DNA (795bp) protein (265aa) |
seg (db=Seg db_id=seg from=73 to=86)
seg (db=Seg db_id=seg from=23 to=38)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
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AMDSBA1_39_15
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
17830..18786
----------------- DNA (957bp) protein (319aa) |
yhcH; multidrug ABC transporter ATPase
Daunorubicin resistance ABC transporter ATPase subunit n=1 Tax=Methanoregula boonei 6A8 RepID=A7IAK8_METB6 (db=UNIREF evalue=4.0e-32 bit_score=144.4 identity=34.7 coverage=76.17554858934169)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=15 to=222 evalue=9.9e-82)
seg (db=Seg db_id=seg from=106 to=117)
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AMDSBA1_39_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
18773..19918
----------------- DNA (1146bp) protein (382aa) |
hypothetical protein
ABC transporter, permease protein, putative n=2 Tax=Sulfobacillus acidophilus RepID=F8I337_SULAT (db=UNIREF evalue=8.8e-42 bit_score=176.8 identity=29.9 coverage=99.21465968586386)
seg (db=Seg db_id=seg from=215 to=237)
seg (db=Seg db_id=seg from=185 to=193)
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AMDSBA1_39_17
unknown
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Not on your lists |
20428..20613
----------------- DNA (186bp) protein (62aa) |
seg (db=Seg db_id=seg from=4 to=15)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
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AMDSBA1_39_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
21963..22421
----------------- DNA (459bp) protein (153aa) |
heat shock protein Hsp20
Heat shock protein Hsp20 n=2 Tax=Sulfobacillus acidophilus RepID=G8U062_9FIRM (db=UNIREF evalue=5.2e-62 bit_score=242.7 identity=74.8 coverage=98.69281045751634)
seg (db=Seg db_id=seg from=85 to=97)
SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY (db=HMMPanther db_id=PTHR11527 from=2 to=150 evalue=3.1e-33)
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AMDSBA1_39_19
unknown
|
Not on your lists |
22543..22680
----------------- DNA (138bp) protein (46aa) |
22543..22680 + ( gc_cont=0.529)
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AMDSBA1_39_20
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria
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Not on your lists |
23054..24388
----------------- DNA (1335bp) protein (445aa) |
glnA; glutamine synthetase
Putative glutamine synthetase n=1 Tax=Synechococcus sp. WH 7805 RepID=A4CXZ9_SYNPV (db=UNIREF evalue=3.7e-44 bit_score=184.9 identity=33.3 coverage=75.95505617977528)
seg (db=Seg db_id=seg from=278 to=288)
seg (db=Seg db_id=seg from=345 to=358)
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AMDSBA1_39_21
Lactobacillus saerimneri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(24385..25497)
----------------- DNA (1113bp) protein (371aa) |
Nodulin/glutamate-ammonia ligase-like protein
Putative uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TM81_9MICO (db=UNIREF evalue=1.2e-43 bit_score=183.0 identity=34.3 coverage=97.03504043126685)
(db=HMMPfam db_id=PF04909 from=186 to=370 evalue=2.7e-22 interpro_id=IPR006992 interpro_description=Amidohydrolase 2 GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
gb def: Hypothetical protein SCO6961 (db=HMMPanther db_id=PTHR20852:SF2 from=154 to=334 evalue=4.1e-22)
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AMDSBA1_39_22
Geobacillus sp. A8, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
26127..28541
----------------- DNA (2415bp) protein (805aa) |
Nitrite reductase
Nitrite reductase
Nitrite reductase [NAD(P)H], large subunit n=4 Tax=Staphylococcus RepID=B9CPU7_STACP (db=UNIREF evalue=2.5e-203 bit_score=714.5 identity=45.4 coverage=98.38509316770187)
seg (db=Seg db_id=seg from=150 to=166)
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AMDSBA1_39_23
Staphylococcus microti, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
28688..29065
----------------- DNA (378bp) protein (126aa) |
nirD; nitrite reductase [NAD(P)H], small subunit
Nitrite reductase (NAD(P)H), small subunit n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I5G0_9BACL (db=UNIREF evalue=2.5e-14 bit_score=84.0 identity=39.8 coverage=86.5079365079365)
ISP domain (db=superfamily db_id=SSF50022 from=1 to=109 evalue=9.6e-24 interpro_id=IPR017941 interpro_description=Rieske [2Fe-2S] iron-sulphur domain GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537), Biological Process: oxidation-reduction process (GO:0055114))
no description (db=Gene3D db_id=G3DSA:2.102.10.10 from=2 to=104 evalue=1.9e-21 interpro_id=IPR017941 interpro_description=Rieske [2Fe-2S] iron-sulphur domain GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537), Biological Process: oxidation-reduction process (GO:0055114))
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AMDSBA1_39_24
Bacillus sonorensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(29032..30105)
----------------- DNA (1074bp) protein (358aa) |
anthranilate phosphoribosyltransferase
Glycosyl transferase family protein n=2 Tax=Synechococcus RepID=Q2JPG0_SYNJB (db=UNIREF evalue=8.5e-23 bit_score=113.6 identity=28.8 coverage=93.29608938547486)
seg (db=Seg db_id=seg from=280 to=290)
Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain (db=superfamily db_id=SSF52418 from=79 to=346 evalue=1.1e-41 interpro_id=IPR000312 interpro_description=Glycosyl transferase, family 3 GO=Biological Process: metabolic process (GO:0008152), Molecular Function: transferase activity, transferring glycosyl groups (GO:0016757))
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AMDSBA1_39_25
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
comp(30198..31448)
----------------- DNA (1251bp) protein (417aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=179 to=198)
transmembrane_regions (db=TMHMM db_id=tmhmm from=150 to=172)
transmembrane_regions (db=TMHMM db_id=tmhmm from=113 to=135)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=106)
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AMDSBA1_39_26
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria
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Not on your lists |
comp(31462..32076)
----------------- DNA (615bp) protein (205aa) |
siroheme synthase
seg (db=Seg db_id=seg from=15 to=25)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=1 to=112 evalue=4.5e-25 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
cysG_Nterm: siroheme synthase, N-terminal (db=HMMTigr db_id=TIGR01470 from=4 to=204 evalue=5.0e-24 interpro_id=IPR006367 interpro_description=Sirohaem synthase, N-terminal GO=Biological Process: porphyrin-containing compound biosynthetic process (GO:0006779), Molecular Function: precorrin-2 dehydrogenase activity (GO:0043115), Biological Process: oxidation-reduction process (GO:0055114))
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AMDSBA1_39_27
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(32097..34244)
----------------- DNA (2148bp) protein (716aa) |
nasC; assimilatory nitrate reductase catalytic subunit
nasC; assimilatory nitrate reductase catalytic subunit
Assimilatory nitrate reductase catalytic subunit n=1 Tax=Streptomyces vitaminophilus RepID=A3R4Q9_9ACTO (db=UNIREF evalue=6.7e-120 bit_score=437.2 identity=39.4 coverage=95.6703910614525)
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AMDSBA1_39_28
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
34641..35006
----------------- DNA (366bp) protein (122aa) |
hypothetical protein
Chromosome undetermined scaffold_107, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=Q3SEB5_PARTE (db=UNIREF evalue=6.1e-13 bit_score=79.3 identity=38.1 coverage=91.80327868852459)
Globin-like (db=superfamily db_id=SSF46458 from=7 to=119 evalue=9.6e-29 interpro_id=IPR009050 interpro_description=Globin-like)
no description (db=Gene3D db_id=G3DSA:1.10.490.10 from=8 to=121 evalue=2.2e-28 interpro_id=IPR012292 interpro_description=Globin, structural domain GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: oxygen transport (GO:0015671), Molecular Function: oxygen binding (GO:0019825), Molecular Function: heme binding (GO:0020037))
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