ggKbase home page

AMDSBA1_45

Alias: AMDSBA1_C44

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_45_1
Acidiplasma sp. MBA-1, Acidiplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(219..1595)
DNA (1377bp) protein (459aa)
Purine-cytosine permease-related protein
Purine-cytosine permease-related protein
NCS1 nucleoside transporter family protein n=2 Tax=Pseudovibrio RepID=B6QZ53_9RHOB (db=UNIREF evalue=7.9e-13 bit_score=80.9 identity=22.9 coverage=95.64270152505446)
transmembrane_regions (db=TMHMM db_id=tmhmm from=420 to=442)
AMDSBA1_45_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2462..3901)
DNA (1440bp) protein (480aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) n=2 Tax=Desulfovibrio RepID=G7Q936_9DELT (db=UNIREF evalue=6.0e-48 bit_score=197.6 identity=31.0 coverage=91.25)
seg (db=Seg db_id=seg from=283 to=294)
seg (db=Seg db_id=seg from=38 to=53)
AMDSBA1_45_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3979..5316)
DNA (1338bp) protein (446aa)
aminotransferase
aminotransferase
Aminotransferase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01P59_SOLUE (db=UNIREF evalue=1.9e-120 bit_score=438.3 identity=52.5 coverage=92.37668161434978)
AMDSBA1_45_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5479..7023
DNA (1545bp) protein (515aa)
purine catabolism PurC domain protein
Purine catabolism PurC domain protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TUS5_9FIRM (db=UNIREF evalue=1.5e-132 bit_score=478.8 identity=52.0 coverage=96.89320388349515)
seg (db=Seg db_id=seg from=265 to=279)
AMDSBA1_45_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7011..8393)
DNA (1383bp) protein (461aa)
dihydropyrimidinase
dihydropyrimidinase
Dihydropyrimidinase n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KNT3_9BURK (db=UNIREF evalue=4.1e-94 bit_score=350.9 identity=41.4 coverage=98.69848156182212)
AMDSBA1_45_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8422..9669)
DNA (1248bp) protein (416aa)
dihydroorotate dehydrogenase family protein (EC:1.3.1.2)
dihydroorotate dehydrogenase family protein (EC:1.3.1.2)
Dihydropyrimidine dehydrogenase n=2 Tax=Labrenzia RepID=A0P1J1_9RHOB (db=UNIREF evalue=3.4e-132 bit_score=477.2 identity=57.2 coverage=97.11538461538461)
AMDSBA1_45_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9662..11020)
DNA (1359bp) protein (453aa)
glutamate synthase (NADPH) (EC:1.4.1.13)
Pyridine nucleotide-disulphide oxidoreductase, class-II:NAD binding site:Adrenodoxin reductase:Pyridine n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1J2_9RHOB (db=UNIREF evalue=1.0e-81 bit_score=309.7 identity=41.5 coverage=92.71523178807946)
GLUTAMATE SYNTHASE (db=HMMPanther db_id=PTHR11938:SF9 from=13 to=450 evalue=8.2e-109)
AMDSBA1_45_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11254..12141)
DNA (888bp) protein (296aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Beta-ureidopropionase n=7 Tax=Geobacillus RepID=F8CZ87_BACTR (db=UNIREF evalue=2.3e-122 bit_score=444.1 identity=67.8 coverage=98.98648648648648)
AMDSBA1_45_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12185..13660)
DNA (1476bp) protein (492aa)
NCS1 nucleoside transporter family
Pc13g12140 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6H588_PENCW (db=UNIREF evalue=2.1e-72 bit_score=278.9 identity=32.5 coverage=94.91869918699187)
transmembrane_regions (db=TMHMM db_id=tmhmm from=232 to=254)
transmembrane_regions (db=TMHMM db_id=tmhmm from=275 to=297)
AMDSBA1_45_10
unknown

Not on your lists

comp(13722..13859)
DNA (138bp) protein (46aa)
13722..13859 - ( gc_cont=0.500)
AMDSBA1_45_11
unknown

Not on your lists

14218..14511
DNA (294bp) protein (98aa)
14218..14511 + ( gc_cont=0.476)
AMDSBA1_45_12
unknown

Not on your lists

14933..15565
DNA (633bp) protein (211aa)
seg (db=Seg db_id=seg from=10 to=23)
AMDSBA1_45_13
unknown

Not on your lists

16355..16711
DNA (357bp) protein (119aa)
16355..16711 + ( gc_cont=0.557)
AMDSBA1_45_14
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17037..17630)
DNA (594bp) protein (198aa)
HAD-like (db=superfamily db_id=SSF56784 from=4 to=195 evalue=2.0e-28 interpro_id=IPR023214 interpro_description=HAD-like domain)
HALOACID DEHALOGENASE-LIKE HYDROLASE (db=HMMPanther db_id=PTHR12725 from=69 to=180 evalue=1.5e-17)
HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN CONTAINING 3 (db=HMMPanther db_id=PTHR12725:SF5 from=69 to=180 evalue=1.5e-17)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=72 to=192 evalue=5.3e-16 interpro_id=IPR023214 interpro_description=HAD-like domain)
AMDSBA1_45_15
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18039..19463)
DNA (1425bp) protein (475aa)
gabD; aldehyde dehydrogenase
gabD; aldehyde dehydrogenase
Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YQW5_NECH7 (db=UNIREF evalue=5.7e-107 bit_score=393.7 identity=44.1 coverage=98.73684210526315)
AMDSBA1_45_16
Bacillaceae bacterium MTCC 8252, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19738..20475)
DNA (738bp) protein (246aa)
Glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Actinoplanes sp. SE50/110 RepID=G8SFJ9_ACTS5 (db=UNIREF evalue=1.5e-10 bit_score=72.4 identity=34.6 coverage=64.22764227642277)
PLC-like phosphodiesterases (db=superfamily db_id=SSF51695 from=8 to=245 evalue=1.4e-52 interpro_id=IPR017946 interpro_description=PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO=Biological Process: lipid metabolic process (GO:0006629), Molecular Function: phosphoric diester hydrolase activity (GO:0008081))
no description (db=Gene3D db_id=G3DSA:3.20.20.190 from=9 to=240 evalue=1.5e-49 interpro_id=IPR017946 interpro_description=PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO=Biological Process: lipid metabolic process (GO:0006629), Molecular Function: phosphoric diester hydrolase activity (GO:0008081))
AMDSBA1_45_17
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20743..21639)
DNA (897bp) protein (299aa)
sugar ABC transporter permease
Binding--dependent transport system inner membrane component family protein n=2 Tax=Brevibacillus laterosporus RepID=H0UBL2_BRELA (db=UNIREF evalue=7.8e-54 bit_score=216.5 identity=39.3 coverage=84.94983277591973)
seg (db=Seg db_id=seg from=20 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=258 to=280)
AMDSBA1_45_18
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21672..22991)
DNA (1320bp) protein (440aa)
sugar ABC transporter substrate-binding protein
Extracellular solute-binding protein n=2 Tax=Paenibacillus RepID=H6CJJ8_9BACL (db=UNIREF evalue=6.1e-31 bit_score=141.0 identity=26.7 coverage=91.81818181818183)
seg (db=Seg db_id=seg from=24 to=41)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA1_45_19
Caldisericum exile, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

Not on your lists

comp(23063..23944)
DNA (882bp) protein (294aa)
ABC transporter permease
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CRB1_PAESJ (db=UNIREF evalue=3.5e-46 bit_score=191.0 identity=37.3 coverage=95.578231292517)
transmembrane_regions (db=TMHMM db_id=tmhmm from=202 to=224)
transmembrane_regions (db=TMHMM db_id=tmhmm from=159 to=181)
AMDSBA1_45_20
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

24208..25239
DNA (1032bp) protein (344aa)
periplasmic binding protein/LacI transcriptional regulator
Alanine racemase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I397_9CLOT (db=UNIREF evalue=1.8e-46 bit_score=192.2 identity=32.2 coverage=95.93023255813954)
HTH_LACI_1 (db=PatternScan db_id=PS00356 from=9 to=27 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Periplasmic binding protein-like I (db=superfamily db_id=SSF53822 from=65 to=337 evalue=1.2e-69)
AMDSBA1_45_21
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25321..26016
DNA (696bp) protein (232aa)
HAD superfamily hydrolase
HAD superfamily hydrolase n=2 Tax=Sulfobacillus acidophilus RepID=G8TYY1_9FIRM (db=UNIREF evalue=7.2e-31 bit_score=139.8 identity=34.2 coverage=93.53448275862068)
HAD-like (db=superfamily db_id=SSF56784 from=1 to=214 evalue=5.7e-21 interpro_id=IPR023214 interpro_description=HAD-like domain)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=81 to=192 evalue=5.5e-08 interpro_id=IPR023214 interpro_description=HAD-like domain)
AMDSBA1_45_22
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26152..27414
DNA (1263bp) protein (421aa)
beta-lactamase domain-containing protein
Hydrolase n=8 Tax=Lactobacillus casei group RepID=B0L7B3_LACCA (db=UNIREF evalue=2.5e-45 bit_score=188.7 identity=32.2 coverage=90.49881235154395)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=1 to=389 evalue=1.2e-31)
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=2 to=213 evalue=7.2e-14)
AMDSBA1_45_23
unknown

Not on your lists

comp(27483..27704)
DNA (222bp) protein (74aa)
27483..27704 - ( gc_cont=0.604)
AMDSBA1_45_24

Not on your lists

comp(27827..29029)
DNA (1203bp) protein (401aa)
macrolide-efflux protein
Major facilitator superfamily MFS_1 n=1 Tax=Herpetosiphon aurantiacus DSM 785 RepID=A9AVF3_HERA2 (db=UNIREF evalue=3.2e-10 bit_score=72.0 identity=22.5 coverage=89.27680798004988)
transmembrane_regions (db=TMHMM db_id=tmhmm from=166 to=188)
transmembrane_regions (db=TMHMM db_id=tmhmm from=216 to=238)
AMDSBA1_45_25
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(29588..29737)
DNA (150bp) protein (50aa)
29588..29737 - ( gc_cont=0.587)
Transposase {ECO:0000313|EMBL:ABE53154.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (
Displaying 25 items

View Taxonomy