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AMDSBA1_54

Alias: AMDSBA1_C53

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA1_54_1
unknown

Not on your lists

comp(2..76)
-----------------
DNA (75bp)
protein (25aa)
2..76 - ( gc_cont=0.467)
AMDSBA1_54_2
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(665..1321)
-----------------
DNA (657bp)
protein (219aa)
hypothetical protein
DedA family protein n=1 Tax=Streptomyces sp. e14 RepID=D6K5H5_9ACTO (db=UNIREF evalue=1.7e-34 bit_score=151.8 identity=40.4 coverage=93.60730593607306)
transmembrane_regions (db=TMHMM db_id=tmhmm from=183 to=202)
transmembrane_regions (db=TMHMM db_id=tmhmm from=146 to=168)
AMDSBA1_54_3
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1494..1997
-----------------
DNA (504bp)
protein (168aa)
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CIZ0_DESK7 (db=UNIREF evalue=1.9e-25 bit_score=121.3 identity=39.7 coverage=86.30952380952381)
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=150 evalue=3.7e-25 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=1 to=121 evalue=4.9e-14 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
AMDSBA1_54_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2111..2317)
-----------------
DNA (207bp)
protein (69aa)
HMA_1 (db=PatternScan db_id=PS01047 from=8 to=37 evalue=0.0 interpro_id=IPR017969 interpro_description=Heavy-metal-associated, conserved site GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
HMA, heavy metal-associated domain (db=superfamily db_id=SSF55008 from=1 to=68 evalue=7.2e-21 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
(db=HMMPfam db_id=PF00403 from=8 to=66 evalue=1.6e-17 interpro_id=IPR006121 interpro_description=Heavy metal-associated domain, HMA GO=Biological Process: metal ion transport (GO:0030001), Molecular Function: metal ion binding (GO:0046872))
no description (db=Gene3D db_id=G3DSA:3.30.70.100 from=1 to=67 evalue=2.6e-17)
AMDSBA1_54_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

3112..4695
-----------------
DNA (1584bp)
protein (528aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
Acyl-CoA synthetase n=1 Tax=Pseudomonas putida RepID=Q9L4M6_PSEPU (db=UNIREF evalue=1.4e-69 bit_score=269.6 identity=33.1 coverage=98.10606060606061)
seg (db=Seg db_id=seg from=103 to=115)
AMP_BINDING (db=PatternScan db_id=PS00455 from=169 to=180 evalue=0.0 interpro_id=IPR020845 interpro_description=AMP-binding, conserved site)
AMDSBA1_54_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4775..5587)
-----------------
DNA (813bp)
protein (271aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Symbiobacterium thermophilum IAM 14863 RepID=MURI_SYMTH (db=UNIREF evalue=1.1e-54 bit_score=219.2 identity=44.6 coverage=96.6789667896679)
seg (db=Seg db_id=seg from=68 to=86)
ASP_GLU_RACEMASE_1 (db=PatternScan db_id=PS00923 from=70 to=78 evalue=0.0 interpro_id=IPR018187 interpro_description=Asp/Glu racemase, active site GO=Molecular Function: racemase and epimerase activity, acting on amino acids and derivatives (GO:0016855))
AMDSBA1_54_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5647..6915)
-----------------
DNA (1269bp)
protein (423aa)
Major facilitator superfamily MFS_1 n=2 Tax=Sulfobacillus acidophilus RepID=G8TVT9_9FIRM (db=UNIREF evalue=1.2e-140 bit_score=505.4 identity=62.0 coverage=95.27186761229315)
major facilitator superfamily protein
major facilitator superfamily protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
AMDSBA1_54_8
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

7079..8038
-----------------
DNA (960bp)
protein (320aa)
potassium channel protein
Potassium channel n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9K9Q3_THENN (db=UNIREF evalue=5.1e-35 bit_score=154.1 identity=29.7 coverage=98.75)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=55)
AMDSBA1_54_9
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8054..9334)
-----------------
DNA (1281bp)
protein (427aa)
hypothetical protein
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRJ1_9CHLR (db=UNIREF evalue=3.6e-20 bit_score=105.1 identity=24.2 coverage=92.03747072599532)
transmembrane_regions (db=TMHMM db_id=tmhmm from=166 to=188)
seg (db=Seg db_id=seg from=265 to=280)
AMDSBA1_54_10
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9331..10035)
-----------------
DNA (705bp)
protein (235aa)
transcriptional regulator
Transcriptional regulator, ArsR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMW6_9CHLR (db=UNIREF evalue=3.5e-09 bit_score=67.8 identity=33.1 coverage=48.51063829787234)
coiled-coil (db=Coil db_id=coil from=159 to=187 evalue=NA)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=4 to=93 evalue=4.6e-21 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
AMDSBA1_54_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10227..11120)
-----------------
DNA (894bp)
protein (298aa)
ribosylpyrimidine nucleosidase (EC:3.2.2.8)
Uncharacterized protein C17G8.02 n=1 Tax=Schizosaccharomyces pombe 972h- RepID=YD62_SCHPO (db=UNIREF evalue=2.1e-35 bit_score=155.2 identity=35.5 coverage=95.63758389261746)
seg (db=Seg db_id=seg from=270 to=284)
seg (db=Seg db_id=seg from=8 to=18)
AMDSBA1_54_12
Bacillus sp. OxB-1, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11204..12328)
-----------------
DNA (1125bp)
protein (375aa)
nucleotidyltransferase/DNA polymerase
DNA polymerase IV 2 n=1 Tax=Patulibacter sp. I11 RepID=H0E9G1_9ACTN (db=UNIREF evalue=1.2e-32 bit_score=146.4 identity=31.0 coverage=94.39999999999999)
seg (db=Seg db_id=seg from=143 to=157)
DNA POLYMERASE IV / KAPPA (db=HMMPanther db_id=PTHR11076:SF12 from=18 to=354 evalue=1.5e-92)
AMDSBA1_54_13
Asticcacaulis benevestitus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12519..12971
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Legionella longbeachae RepID=D1RH67_LEGLO (db=UNIREF evalue=2.0e-18 bit_score=97.8 identity=37.5 coverage=88.74172185430463)
seg (db=Seg db_id=seg from=58 to=67)
YbjQ-like (db=superfamily db_id=SSF117782 from=48 to=140 evalue=1.3e-18)
AMDSBA1_54_14
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria

Not on your lists

comp(13076..14800)
-----------------
DNA (1725bp)
protein (575aa)
ABC-1 domain-containing protein
ABC-1 domain protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1ID84_9CHLR (db=UNIREF evalue=1.1e-51 bit_score=210.3 identity=30.7 coverage=89.56521739130436)
transmembrane_regions (db=TMHMM db_id=tmhmm from=540 to=562)
transmembrane_regions (db=TMHMM db_id=tmhmm from=514 to=536)
AMDSBA1_54_15
unknown

Not on your lists

comp(14832..15047)
-----------------
DNA (216bp)
protein (72aa)
14832..15047 - ( gc_cont=0.454)
AMDSBA1_54_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15279..16877)
-----------------
DNA (1599bp)
protein (533aa)
emrB; EmrB/QacA family drug resistance transporter
Putative permease of the major facilitator superfamily n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VG08_CORU7 (db=UNIREF evalue=2.5e-58 bit_score=232.3 identity=34.8 coverage=75.60975609756098)
transmembrane_regions (db=TMHMM db_id=tmhmm from=88 to=110)
transmembrane_regions (db=TMHMM db_id=tmhmm from=142 to=164)
AMDSBA1_54_17
unknown

Not on your lists

17336..17527
-----------------
DNA (192bp)
protein (64aa)
17336..17527 + ( gc_cont=0.531)
AMDSBA1_54_18
unknown

Not on your lists

comp(17706..18173)
-----------------
DNA (468bp)
protein (156aa)
17706..18173 - ( gc_cont=0.541)
AMDSBA1_54_19
unknown

Not on your lists

comp(18173..18445)
-----------------
DNA (273bp)
protein (91aa)
(db=HMMPfam db_id=PF01909 from=15 to=60 evalue=2.0e-10 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=1 to=82 evalue=4.5e-10)
AMDSBA1_54_20
Bacillus sp. 2_A_57_CT2, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18879..19292)
-----------------
DNA (414bp)
protein (138aa)
hypothetical protein (db=KEGG evalue=2.4e-10 bit_score=70.5 identity=38.4 coverage=76.81159420289855)
Putative uncharacterized protein n=1 Tax=Bacillus sp. SG-1 RepID=A6CJE7_9BACI (db=UNIREF evalue=8.7e-08 bit_score=62.4 identity=35.2 coverage=72.46376811594203)
AMDSBA1_54_21
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(19558..20226)
-----------------
DNA (669bp)
protein (223aa)
Dienelactone hydrolase
Dienelactone hydrolase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5N2_SPHTD (db=UNIREF evalue=9.4e-28 bit_score=129.4 identity=38.3 coverage=95.96412556053812)
seg (db=Seg db_id=seg from=65 to=79)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=1 to=222 evalue=1.4e-41)
AMDSBA1_54_22
unknown

Not on your lists

comp(20367..20456)
-----------------
DNA (90bp)
protein (30aa)
20367..20456 - ( gc_cont=0.444)
AMDSBA1_54_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21467..22714)
-----------------
DNA (1248bp)
protein (416aa)
ribonucleoside-diphosphate reductase class II (EC:1.17.4.-)
ribonucleoside-diphosphate reductase class II (EC:1.17.4.-)
Ribonucleoside-diphosphate reductase class II n=2 Tax=Sulfobacillus acidophilus RepID=G8TS86_9FIRM (db=UNIREF evalue=2.4e-186 bit_score=657.1 identity=79.1 coverage=99.51923076923077)
seg (db=Seg db_id=seg from=93 to=105)
Displaying 23 items

View Taxonomy