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AMDSBA1_60

Alias: AMDSBA1_C59

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_60_1
unknown

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2..118
DNA (117bp) protein (39aa)
2..118 + ( gc_cont=0.607)
AMDSBA1_60_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(112..834)
DNA (723bp) protein (241aa)
Cell wall hydrolase SleB n=2 Tax=Sulfobacillus acidophilus RepID=G8U084_9FIRM (db=UNIREF evalue=1.3e-11 bit_score=75.9 identity=32.0 coverage=76.34854771784232)
seg (db=Seg db_id=seg from=196 to=205)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
(db=HMMPfam db_id=PF01476 from=81 to=123 evalue=2.8e-12 interpro_id=IPR018392 interpro_description=Peptidoglycan-binding lysin domain GO=Biological Process: cell wall macromolecule catabolic process (GO:0016998))
AMDSBA1_60_3
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(903..1994)
DNA (1092bp) protein (364aa)
transporter, major facilitator family
transmembrane_regions (db=TMHMM db_id=tmhmm from=124 to=146)
seg (db=Seg db_id=seg from=263 to=275)
transmembrane_regions (db=TMHMM db_id=tmhmm from=193 to=215)
AMDSBA1_60_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2233..4191
DNA (1959bp) protein (653aa)
prolyl oligopeptidase (EC:3.4.21.26)
prolyl oligopeptidase (EC:3.4.21.26)
Putative prolyl oligopeptidase family protein n=14 Tax=Corynebacterium diphtheriae RepID=I4JW32_CORDP (db=UNIREF evalue=4.6e-51 bit_score=208.4 identity=34.3 coverage=55.4364471669219)
PROLYL ENDOPEPTIDASE (PROLYL OLIGOPEPTIDASE) (db=HMMPanther db_id=PTHR11757:SF2 from=1 to=650 evalue=5.3e-110)
AMDSBA1_60_5
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4419..5054
DNA (636bp) protein (212aa)
FMN-binding negative transcriptional regulator
Transcriptional repressor of sporulation and degradative enzyme production n=1 Tax=Bacillus sp. SG-1 RepID=A6CKJ5_9BACI (db=UNIREF evalue=2.3e-39 bit_score=167.9 identity=40.6 coverage=93.39622641509435)
(db=HMMPfam db_id=PF04299 from=1 to=158 evalue=2.4e-54 interpro_id=IPR007396 interpro_description=Negative transcriptional regulator)
FMN-binding split barrel (db=superfamily db_id=SSF50475 from=1 to=182 evalue=7.0e-45 interpro_id=IPR009002 interpro_description=FMN-binding split barrel-related)
AMDSBA1_60_6
unknown

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5818..6309
DNA (492bp) protein (164aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=10 to=29)
AMDSBA1_60_7
unknown

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6328..6621
DNA (294bp) protein (98aa)
6328..6621 + ( gc_cont=0.537)
AMDSBA1_60_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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6771..7295
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RPZ3_9FIRM (db=UNIREF evalue=7.6e-09 bit_score=66.2 identity=52.5 coverage=33.14285714285714)
(db=HMMPfam db_id=PF03389 from=2 to=36 evalue=5.9e-06 interpro_id=IPR005053 interpro_description=MobA/MobL protein GO=Biological Process: unidirectional conjugation (GO:0009291))
Uncharacterized protein {ECO:0000313|EMBL:EHL74424.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FA
MobA/MobL family.
AMDSBA1_60_9
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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8621..9370
DNA (750bp) protein (250aa)
CoB--CoM heterodisulfide reductase (EC:1.8.98.1)
CoB--CoM heterodisulfide reductase n=2 Tax=Geobacter metallireducens RepID=H1L9E5_GEOME (db=UNIREF evalue=2.5e-13 bit_score=81.6 identity=28.0 coverage=90.0)
seg (db=Seg db_id=seg from=190 to=199)
seg (db=Seg db_id=seg from=104 to=115)
AMDSBA1_60_10
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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9376..11799
DNA (2424bp) protein (808aa)
anaerobic dehydrogenase, typically selenocysteine-containing
Molybdopterin oxidoreductase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D7K1_9BACT (db=UNIREF evalue=1.5e-22 bit_score=114.0 identity=22.8 coverage=70.91584158415841)
seg (db=Seg db_id=seg from=336 to=347)
MOLYBDOPTERIN_PROK_3 (db=PatternScan db_id=PS00932 from=663 to=690 evalue=0.0 interpro_id=IPR006655 interpro_description=Molybdopterin oxidoreductase, prokaryotic, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: oxidoreductase activity, acting on other nitrogenous compounds as donors (GO:0016661), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA1_60_11
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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11814..12422
DNA (609bp) protein (203aa)
anaerobic dimethyl sulfoxide reductase subunit B
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ferroglobus placidus DSM 10642 RepID=D3RY47_FERPA (db=UNIREF evalue=2.7e-18 bit_score=97.8 identity=30.1 coverage=82.26600985221675)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=119 to=130 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4Fe-4S ferredoxins (db=superfamily db_id=SSF54862 from=21 to=188 evalue=2.5e-56)
AMDSBA1_60_12
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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12437..12691
DNA (255bp) protein (85aa)
12437..12691 + ( gc_cont=0.522)
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
AMDSBA1_60_13
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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12717..14000
DNA (1284bp) protein (428aa)
molybdenum cofactor biosynthesis protein MoeA
Molybdenum cofactor synthesis domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZS0_HALNC (db=UNIREF evalue=4.0e-27 bit_score=128.3 identity=29.0 coverage=69.39252336448598)
seg (db=Seg db_id=seg from=376 to=389)
MOLYBDOPTERIN BIOSYNTHESIS PROTEIN (db=HMMPanther db_id=PTHR10192 from=4 to=421 evalue=1.4e-88)
AMDSBA1_60_14
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

13997..14941
DNA (945bp) protein (315aa)
molybdenum cofactor biosynthesis protein A
Probable molybdenum cofactor biosynthesis protein A n=1 Tax=Archaeoglobus fulgidus DSM 4304 RepID=MOAA_ARCFU (db=UNIREF evalue=9.5e-34 bit_score=149.8 identity=40.8 coverage=58.41269841269842)
seg (db=Seg db_id=seg from=257 to=275)
seg (db=Seg db_id=seg from=237 to=246)
AMDSBA1_60_15
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14898..15389
DNA (492bp) protein (164aa)
Tetrahydrobiopterin biosynthesis enzymes-like (db=superfamily db_id=SSF55620 from=12 to=161 evalue=5.5e-21)
no description (db=Gene3D db_id=G3DSA:3.30.479.10 from=12 to=161 evalue=4.0e-20)
(db=HMMPfam db_id=PF01242 from=13 to=157 evalue=4.7e-14 interpro_id=IPR007115 interpro_description=6-pyruvoyl tetrahydropterin synthase-related GO=Molecular Function: 6-pyruvoyltetrahydropterin synthase activity (GO:0003874), Biological Process: tetrahydrobiopterin biosynthetic process (GO:0006729), Molecular Function: metal ion binding (GO:0046872))
Queuosine biosynthesis QueD, PTPS-I {ECO:0000313|EMBL:AKB14051.1}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Metha
AMDSBA1_60_16
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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15386..15985
DNA (600bp) protein (200aa)
molybdenum cofactor guanylyltransferase
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Methanocella arvoryzae MRE50 RepID=Q0W5V4_UNCMA (db=UNIREF evalue=7.6e-13 bit_score=79.7 identity=30.8 coverage=91.5)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=1 to=185 evalue=6.7e-38)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=189 evalue=6.2e-20)
AMDSBA1_60_17
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

16096..16611
DNA (516bp) protein (172aa)
4Fe-4S ferredoxin
Iron-sulfur cluster-binding protein n=6 Tax=Clostridium thermocellum RepID=A3DBW1_CLOTH (db=UNIREF evalue=1.1e-12 bit_score=79.0 identity=29.9 coverage=74.4186046511628)
seg (db=Seg db_id=seg from=152 to=167)
4Fe-4S ferredoxins (db=superfamily db_id=SSF54862 from=13 to=140 evalue=1.3e-28)
AMDSBA1_60_18
GWC2_SYX_53_9_curated, Bacteria

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16612..17886
DNA (1275bp) protein (425aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=2 Tax=Geobacter metallireducens RepID=H1L7H3_GEOME (db=UNIREF evalue=9.6e-82 bit_score=309.7 identity=41.6 coverage=94.35294117647058)
seg (db=Seg db_id=seg from=56 to=69)
AMDSBA1_60_19
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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17980..19161
DNA (1182bp) protein (394aa)
sulfate transporter
Molybdate transporter 1 n=3 Tax=Brassicaceae RepID=MOT1_ARATH (db=UNIREF evalue=6.1e-30 bit_score=137.5 identity=33.5 coverage=52.79187817258884)
transmembrane_regions (db=TMHMM db_id=tmhmm from=359 to=381)
transmembrane_regions (db=TMHMM db_id=tmhmm from=327 to=349)
AMDSBA1_60_20
unknown

Not on your lists

19517..19708
DNA (192bp) protein (64aa)
19517..19708 + ( gc_cont=0.510)
AMDSBA1_60_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19701..19862
DNA (162bp) protein (54aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily n=2 Tax=Sulfobacillus acidophilus RepID=F8IAB3_SULAT
Uncharacterized protein {ECO:0000313|EMBL:AEW04972.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob
Displaying 21 items

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