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AMDSBA1_67

Alias: AMDSBA1_C66

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_67_1
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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2..865
DNA (864bp) protein (288aa)
Oligoxyloglucan reducing end-specific cellobiohydrolase (db=superfamily db_id=SSF110296 from=230 to=284 evalue=9.3e-11)
Sialidases (db=superfamily db_id=SSF50939 from=61 to=281 evalue=6.5e-08 interpro_id=IPR011040 interpro_description=Neuraminidase)
no description (db=Gene3D db_id=G3DSA:2.130.10.140 from=158 to=287 evalue=0.00014)
hypothetical protein Tax=GWF2_Bacteroidetes_38_335_curated
AMDSBA1_67_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1280..2866
DNA (1587bp) protein (529aa)
acs; acetyl-coenzyme A synthetase family protein
acs; acetyl-coenzyme A synthetase family protein
Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PBE8_9FIRM (db=UNIREF evalue=1.0e-125 bit_score=456.1 identity=45.0 coverage=98.10964083175804)
MIDDLE-CHAIN ACYL-COA SYNTHETASE1 (MEDIUM-CHAIN ACYL-COA SYNTHETASE) (db=HMMPanther db_id=PTHR11968:SF39 from=5 to=520 evalue=1.2e-221)
AMDSBA1_67_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3632..4711
DNA (1080bp) protein (360aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I4C7_SULAT (db=UNIREF evalue=1.1e-107 bit_score=395.6 identity=63.8 coverage=87.5)
AMDSBA1_67_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4733..6001)
DNA (1269bp) protein (423aa)
3-hydroxy-3-methylglutaryl-coenzyme A reductase (EC:1.1.1.34)
Hydroxymethylglutaryl-CoA reductase (NADPH) n=1 Tax=Streptomyces sp. SirexAA-E RepID=G2NNA9_9ACTO (db=UNIREF evalue=4.4e-42 bit_score=177.9 identity=35.5 coverage=80.6146572104019)
HMG_COA_REDUCTASE_2 (db=PatternScan db_id=PS00318 from=354 to=361 evalue=0.0 interpro_id=IPR023076 interpro_description=Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO=Molecular Function: hydroxymethylglutaryl-CoA reductase (NADPH) activity (GO:0004420), Biological Process: oxidation-reduction process (GO:0055114))
(db=HMMPfam db_id=PF00368 from=14 to=415 evalue=8.6e-72 interpro_id=IPR002202 interpro_description=Hydroxymethylglutaryl-CoA reductase, class I/II GO=Molecular Function: hydroxymethylglutaryl-CoA reductase (NADPH) activity (GO:0004420), Biological Process: coenzyme A metabolic process (GO:0015936), Molecular Function: coenzyme binding (GO:0050662), Biological Process: oxidation-reduction process (GO:0055114))
AMDSBA1_67_5
unknown

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comp(6138..6824)
DNA (687bp) protein (229aa)
seg (db=Seg db_id=seg from=83 to=100)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=62 to=223 evalue=1.1e-13)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=85 to=223 evalue=2.0e-05)
AMDSBA1_67_6
unknown

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comp(6855..7484)
DNA (630bp) protein (210aa)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=6 to=56 evalue=5.7e-07)
(db=HMMPfam db_id=PF08279 from=13 to=48 evalue=1.6e-05 interpro_id=IPR013196 interpro_description=Helix-turn-helix, type 11)
AMDSBA1_67_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7481..8560)
DNA (1080bp) protein (360aa)
biotin/lipoate A/B protein ligase
Biotin/lipoate A/B protein ligase n=2 Tax=Sulfobacillus acidophilus RepID=G8TWJ0_9FIRM (db=UNIREF evalue=9.0e-89 bit_score=332.8 identity=50.7 coverage=96.11111111111111)
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=1 to=237 evalue=3.5e-44)
AMDSBA1_67_8
unknown

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comp(8595..8705)
DNA (111bp) protein (37aa)
8595..8705 - ( gc_cont=0.405)
AMDSBA1_67_9
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8665..9030)
DNA (366bp) protein (122aa)
hypothetical protein
DsrE family protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWJ2_9FIRM (db=UNIREF evalue=7.9e-29 bit_score=132.1 identity=55.7 coverage=97.54098360655738)
DsrEFH-like (db=superfamily db_id=SSF75169 from=1 to=121 evalue=2.8e-20)
(db=HMMPfam db_id=PF02635 from=3 to=105 evalue=7.9e-09 interpro_id=IPR003787 interpro_description=Sulphur relay, DsrE/F-like protein)
AMDSBA1_67_10
Halorhodospira halophila, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9034..9285)
DNA (252bp) protein (84aa)
SirA family protein
UPF0033 (db=PatternScan db_id=PS01148 from=8 to=32 evalue=0.0 interpro_id=IPR001455 interpro_description=TusA-like domain)
SirA-like (db=superfamily db_id=SSF64307 from=6 to=75 evalue=1.5e-24 interpro_id=IPR001455 interpro_description=TusA-like domain)
(db=HMMPfam db_id=PF01206 from=7 to=75 evalue=4.8e-22 interpro_id=IPR001455 interpro_description=TusA-like domain)
AMDSBA1_67_11
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(9335..9775)
DNA (441bp) protein (147aa)
protein GcvH
Glycine cleavage system H protein 2 n=2 Tax=Sulfobacillus acidophilus RepID=G8TWI8_9FIRM (db=UNIREF evalue=2.4e-32 bit_score=144.1 identity=43.8 coverage=97.95918367346938)
(db=HMMPfam db_id=PF01597 from=15 to=130 evalue=3.1e-29 interpro_id=IPR002930 interpro_description=Glycine cleavage H-protein GO=Cellular Component: glycine cleavage complex (GO:0005960), Biological Process: glycine catabolic process (GO:0006546))
GLYCINE CLEAVAGE SYSTEM H PROTEIN (db=HMMPanther db_id=PTHR11715 from=14 to=122 evalue=1.2e-23 interpro_id=IPR002930 interpro_description=Glycine cleavage H-protein GO=Cellular Component: glycine cleavage complex (GO:0005960), Biological Process: glycine catabolic process (GO:0006546))
AMDSBA1_67_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

10159..10527
DNA (369bp) protein (123aa)
DsrE family protein; K07092 (db=KEGG evalue=1.2e-08 bit_score=64.7 identity=30.1 coverage=90.2439024390244)
seg (db=Seg db_id=seg from=25 to=36)
DsrEFH-like (db=superfamily db_id=SSF75169 from=1 to=121 evalue=8.7e-16)
(db=HMMPfam db_id=PF02635 from=4 to=119 evalue=4.2e-07 interpro_id=IPR003787 interpro_description=Sulphur relay, DsrE/F-like protein)
AMDSBA1_67_13
Hydrogenobaculum sp. Y04AAS1, Hydrogenobaculum, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

10592..11305
DNA (714bp) protein (238aa)
hypothetical protein
Putative CoB--CoM heterodisulfide reductase iron-sulfur subunit C n=1 Tax=Methanocella paludicola SANAE RepID=D1Z041_METPS (db=UNIREF evalue=6.5e-11 bit_score=73.6 identity=30.7 coverage=60.08403361344538)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=89 to=100 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=43 to=54 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
AMDSBA1_67_14
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11429..12664
DNA (1236bp) protein (412aa)
hypothetical protein
hypothetical protein
Heterodisulfite reductase, subunit B (HdrB-1) n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8USP5_9AQUI (db=UNIREF evalue=6.6e-136 bit_score=489.6 identity=59.6 coverage=88.10679611650485)
AMDSBA1_67_15
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

12679..13725
DNA (1047bp) protein (349aa)
pyridine nucleotide-disulfide oxidoreductase
Heterodisulfide reductase subunit A-like protein n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=HDLA_ARCPA (db=UNIREF evalue=2.3e-25 bit_score=122.1 identity=31.2 coverage=68.48137535816619)
FAD/NAD(P)-binding domain (db=superfamily db_id=SSF51905 from=1 to=343 evalue=2.3e-34)
no description (db=Gene3D db_id=G3DSA:3.50.50.60 from=3 to=343 evalue=1.3e-17)
AMDSBA1_67_16
unknown

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13722..14534
DNA (813bp) protein (271aa)
seg (db=Seg db_id=seg from=69 to=84)
AMDSBA1_67_17
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14577..15269
DNA (693bp) protein (231aa)
iron-sulfur cluster-binding protein
Fe-S oxidoreductase n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CH28_DESK7 (db=UNIREF evalue=7.5e-12 bit_score=76.6 identity=28.7 coverage=71.86147186147186)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=113 to=124 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
alpha-helical ferredoxin (db=superfamily db_id=SSF46548 from=25 to=152 evalue=7.5e-15 interpro_id=IPR009051 interpro_description=Alpha-helical ferredoxin GO=Molecular Function: iron-sulfur cluster binding (GO:0051536))
AMDSBA1_67_18
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

Not on your lists

15294..16217
DNA (924bp) protein (308aa)
CoB--CoM heterodisulfide reductase
Cysteine-rich domain protein n=2 Tax=Aciduliprofundum boonei T469 RepID=B5IDB8_ACIB4 (db=UNIREF evalue=2.4e-37 bit_score=161.8 identity=35.7 coverage=87.01298701298701)
(db=HMMPfam db_id=PF02754 from=184 to=241 evalue=1.6e-05 interpro_id=IPR004017 interpro_description=Cysteine-rich domain)
(db=HMMPfam db_id=PF02754 from=32 to=85 evalue=0.068 interpro_id=IPR004017 interpro_description=Cysteine-rich domain)
AMDSBA1_67_19
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

16257..16697
DNA (441bp) protein (147aa)
glycine cleavage system H protein
Glycine cleavage system H protein 2 n=1 Tax=Aquifex aeolicus VF5 RepID=GCSH2_AQUAE (db=UNIREF evalue=1.9e-32 bit_score=144.4 identity=48.6 coverage=95.91836734693877)
LIPOYL (db=PatternScan db_id=PS00189 from=54 to=83 evalue=0.0 interpro_id=IPR003016 interpro_description=2-oxo acid dehydrogenase, lipoyl-binding site)
GLYCINE CLEAVAGE SYSTEM H PROTEIN (db=HMMPanther db_id=PTHR11715 from=1 to=146 evalue=1.6e-37 interpro_id=IPR002930 interpro_description=Glycine cleavage H-protein GO=Cellular Component: glycine cleavage complex (GO:0005960), Biological Process: glycine catabolic process (GO:0006546))
AMDSBA1_67_20
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16710..16979
DNA (270bp) protein (90aa)
hypothetical protein
S-adenosylmethionine synthetase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URC9_9AQUI (db=UNIREF evalue=1.0e-09 bit_score=68.2 identity=38.0 coverage=86.66666666666667)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=4 to=82 evalue=3.3e-12 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
no description (db=Gene3D db_id=G3DSA:3.40.30.10 from=4 to=83 evalue=2.1e-10 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
Displaying 20 items

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