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AMDSBA1_70

Alias: AMDSBA1_C69

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Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_70_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1820
DNA (1818bp) protein (606aa)
type III restriction protein res subunit
Helicase domain protein n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MD01_CALMQ (db=UNIREF evalue=1.7e-15 bit_score=90.1 identity=22.8 coverage=62.541254125412536)
Hedgehog/intein (Hint) domain (db=superfamily db_id=SSF51294 from=32 to=162 evalue=2.1e-17)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=161 to=392 evalue=1.2e-26)
AMDSBA1_70_2
unknown

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1878..2027
DNA (150bp) protein (50aa)
seg (db=Seg db_id=seg from=22 to=49)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
AMDSBA1_70_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2154..3251
DNA (1098bp) protein (366aa)
primase P4-like protein
Primase P4-like protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TU20_9FIRM (db=UNIREF evalue=3.5e-72 bit_score=277.7 identity=46.1 coverage=92.07650273224044)
seg (db=Seg db_id=seg from=332 to=343)
Uncharacterized protein {ECO:0000313|EMBL:AEJ40929.1}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfo
AMDSBA1_70_4
unknown

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3445..4185
DNA (741bp) protein (247aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
AMDSBA1_70_5
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4407..5750)
DNA (1344bp) protein (448aa)
transposase
ISSoc9, transposase n=3 Tax=Neisseriaceae RepID=D6L1C7_9NEIS (db=UNIREF evalue=1.1e-11 bit_score=77.0 identity=22.6 coverage=66.07142857142857)
seg (db=Seg db_id=seg from=285 to=296)
(db=HMMPfam db_id=PF07282 from=363 to=432 evalue=5.3e-18 interpro_id=IPR010095 interpro_description=Transposase IS605, OrfB, C-terminal)
AMDSBA1_70_6
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6053..8485
DNA (2433bp) protein (811aa)
peptidase S16 lon domain-containing protein rbh
peptidase S16 lon domain-containing protein rbh
ATP-dependent protease, putative n=1 Tax=Marinomonas sp. MED121 RepID=A3YHR9_9GAMM (db=UNIREF evalue=1.1e-126 bit_score=459.9 identity=34.0 coverage=97.16399506781751)
AMDSBA1_70_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8594..10600)
DNA (2007bp) protein (669aa)
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 n=1 Tax=Vulcanisaeta distributa DSM 14429 RepID=E1QSK5_VULDI (db=UNIREF evalue=2.9e-109 bit_score=401.7 identity=39.5 coverage=83.70702541106128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=162 to=184)
seg (db=Seg db_id=seg from=171 to=185)
AMDSBA1_70_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10587..11111)
DNA (525bp) protein (175aa)
HTH_MARR_1 (db=PatternScan db_id=PS01117 from=70 to=104 evalue=0.0 interpro_id=IPR023187 interpro_description=Transcriptional regulator MarR-type, conserved site)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=9 to=148 evalue=2.0e-24)
no description (db=HMMSmart db_id=SM00347 from=32 to=131 evalue=9.7e-20 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
(db=HMMPfam db_id=PF01047 from=39 to=95 evalue=3.8e-12 interpro_id=IPR000835 interpro_description=Transcription regulator HTH, MarR-type GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
AMDSBA1_70_9
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12052..13161)
DNA (1110bp) protein (370aa)
peptidase S1
seg (db=Seg db_id=seg from=74 to=88)
seg (db=Seg db_id=seg from=288 to=367)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
AMDSBA1_70_10
unknown

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13577..14707
DNA (1131bp) protein (377aa)
seg (db=Seg db_id=seg from=217 to=234)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
AMDSBA1_70_11
unknown

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15652..15918
DNA (267bp) protein (89aa)
15652..15918 + ( gc_cont=0.644)
Displaying 11 items

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