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AMDSBA1_77

Alias: AMDSBA1_C76

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
AMDSBA1_77_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(240..1640)
-----------------
DNA (1401bp)
protein (467aa)
fumC; fumarate lyase
fumC; fumarate lyase
Putative Lyase n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW97M7 RepID=B3T3C4_9ARCH (db=UNIREF evalue=1.5e-96 bit_score=359.0 identity=41.4 coverage=96.35974304068522)
seg (db=Seg db_id=seg from=54 to=82)
AMDSBA1_77_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1749..1910)
-----------------
DNA (162bp)
protein (54aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYK7_9FIRM (db=UNIREF evalue=4.7e-10 bit_score=68.6 identity=67.4 coverage=77.77777777777779)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I9V7_SULAT
AMDSBA1_77_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2017..2922)
-----------------
DNA (906bp)
protein (302aa)
rbsK; ribokinase
LOC495991 protein n=1 Tax=Xenopus laevis RepID=Q3KPV8_XENLA (db=UNIREF evalue=1.1e-36 bit_score=159.5 identity=34.2 coverage=97.68211920529801)
seg (db=Seg db_id=seg from=243 to=259)
seg (db=Seg db_id=seg from=119 to=128)
AMDSBA1_77_4
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3157..3936
-----------------
DNA (780bp)
protein (260aa)
beta-lactamase
Beta-lactamase n=4 Tax=Fusobacterium RepID=A5TRP4_FUSNP (db=UNIREF evalue=4.0e-30 bit_score=137.5 identity=34.9 coverage=88.07692307692308)
seg (db=Seg db_id=seg from=54 to=65)
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=3 to=258 evalue=5.6e-51 interpro_id=IPR012338 interpro_description=Beta-lactamase/transpeptidase-like)
AMDSBA1_77_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3933..4388)
-----------------
DNA (456bp)
protein (152aa)
INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED (db=HMMPanther db_id=PTHR11911:SF5 from=1 to=147 evalue=4.9e-28)
INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED (db=HMMPanther db_id=PTHR11911 from=1 to=147 evalue=4.9e-28)
(db=HMMPfam db_id=PF00571 from=3 to=57 evalue=1.6e-16 interpro_id=IPR000644 interpro_description=Cystathionine beta-synthase, core GO=Molecular Function: protein binding (GO:0005515))
CBS-domain (db=superfamily db_id=SSF54631 from=81 to=149 evalue=2.1e-15)
AMDSBA1_77_6
unknown

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4627..4788
-----------------
DNA (162bp)
protein (54aa)
4627..4788 + ( gc_cont=0.432)
AMDSBA1_77_7
unknown

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4810..5076
-----------------
DNA (267bp)
protein (89aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=77)
AMDSBA1_77_8
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5254..5676
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MEC0_ALKOO (db=UNIREF evalue=3.1e-21 bit_score=107.1 identity=42.7 coverage=80.85106382978722)
(db=HMMPfam db_id=PF09862 from=8 to=119 evalue=4.1e-34 interpro_id=IPR018658 interpro_description=Protein of unknown function DUF2089)
AMDSBA1_77_9
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5702..6781
-----------------
DNA (1080bp)
protein (360aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFT6_THET1 (db=UNIREF evalue=3.0e-07 bit_score=62.0 identity=27.3 coverage=53.888888888888886)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFT6_THET1
AMDSBA1_77_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6864..7712)
-----------------
DNA (849bp)
protein (283aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYL2_9FIRM (db=UNIREF evalue=3.4e-107 bit_score=393.7 identity=67.6 coverage=98.93992932862191)
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=100)
AMDSBA1_77_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7709..8374)
-----------------
DNA (666bp)
protein (222aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TYL3_9FIRM (db=UNIREF evalue=6.2e-48 bit_score=196.4 identity=41.4 coverage=99.09909909909909)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
(db=HMMPfam db_id=PF11209 from=44 to=124 evalue=1.0e-06 interpro_id=IPR021373 interpro_description=Protein of unknown function DUF2993)
AMDSBA1_77_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8371..9384)
-----------------
DNA (1014bp)
protein (338aa)
peptide chain release factor 2
peptide chain release factor 2
Peptide chain release factor 2 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HT09_9FIRM (db=UNIREF evalue=7.6e-106 bit_score=389.4 identity=57.6 coverage=95.26627218934911)
AMDSBA1_77_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9521..12076)
-----------------
DNA (2556bp)
protein (852aa)
seg (db=Seg db_id=seg from=466 to=479)
SECA (db=PatternScan db_id=PS01312 from=481 to=496 evalue=0.0 interpro_id=IPR020937 interpro_description=SecA conserved site GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
secA: preprotein translocase, SecA subunit (db=HMMTigr db_id=TIGR00963 from=27 to=768 evalue=0.0 interpro_id=IPR000185 interpro_description=SecA protein GO=Molecular Function: ATP binding (GO:0005524), Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886))
(db=HMMPfam db_id=PF07517 from=7 to=383 evalue=1.7e-126 interpro_id=IPR011115 interpro_description=SecA DEAD-like, N-terminal GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: membrane (GO:0016020), Biological Process: protein import (GO:0017038))
AMDSBA1_77_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12169..13485)
-----------------
DNA (1317bp)
protein (439aa)
metal dependent phosphohydrolase
Uncharacterized protein aq_2027 n=1 Tax=Aquifex aeolicus VF5 RepID=Y2027_AQUAE (db=UNIREF evalue=1.1e-27 bit_score=130.2 identity=38.8 coverage=38.496583143507976)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=127)
seg (db=Seg db_id=seg from=210 to=225)
AMDSBA1_77_15
unknown

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comp(13531..13668)
-----------------
DNA (138bp)
protein (46aa)
13531..13668 - ( gc_cont=0.442)
Displaying 15 items

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