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AMDSBA1_79

Alias: AMDSBA1_C78

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
AMDSBA1_79_1
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..784
DNA (783bp) protein (261aa)
carbohydrate ABC transporter substrate-binding protein
carbohydrate ABC transporter substrate-binding protein
Extracellular solute-binding protein family 1 n=2 Tax=Sulfobacillus acidophilus RepID=F8I8Q8_SULAT (db=UNIREF evalue=2.0e-114 bit_score=417.5 identity=76.8 coverage=98.46743295019157)
AMDSBA1_79_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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846..1811
DNA (966bp) protein (322aa)
carbohydrate ABC transporter membrane protein 1 rbh
Putative uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NTD2_9FIRM (db=UNIREF evalue=7.9e-28 bit_score=130.2 identity=28.5 coverage=84.78260869565217)
seg (db=Seg db_id=seg from=94 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=286 to=308)
AMDSBA1_79_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1808..2647
DNA (840bp) protein (280aa)
binding-protein-dependent transport system inner membrane protein rbh
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IN36_9CLOT (db=UNIREF evalue=3.8e-26 bit_score=124.4 identity=28.8 coverage=99.28571428571429)
transmembrane_regions (db=TMHMM db_id=tmhmm from=239 to=261)
transmembrane_regions (db=TMHMM db_id=tmhmm from=197 to=219)
AMDSBA1_79_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2673..5105
DNA (2433bp) protein (811aa)
glycoside hydrolase family protein
Alpha-glucosidase n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZLJ1_NODSP (db=UNIREF evalue=4.0e-84 bit_score=318.5 identity=38.8 coverage=48.581997533908755)
seg (db=Seg db_id=seg from=64 to=76)
NEUTRAL ALPHA-GLUCOSIDASE AB PRECURSOR (GLUCOSIDASE II ALPHA SUBUNIT) (ALPHA GLUCOSIDASE 2) (db=HMMPanther db_id=PTHR22762:SF7 from=134 to=809 evalue=1.5e-223)
AMDSBA1_79_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5736..6548)
DNA (813bp) protein (271aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Rhodobacter capsulatus SB 1003 RepID=D5ARC4_RHOCB (db=UNIREF evalue=1.0e-15 bit_score=89.7 identity=27.7 coverage=99.2619926199262)
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=157)
transmembrane_regions (db=TMHMM db_id=tmhmm from=167 to=189)
AMDSBA1_79_6
unknown

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comp(7035..7511)
DNA (477bp) protein (159aa)
7035..7511 - ( gc_cont=0.574)
AMDSBA1_79_7
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7605..8159)
DNA (555bp) protein (185aa)
HNH endonuclease
Putative uncharacterized protein n=4 Tax=Marinobacter sp. ELB17 RepID=A3JJ77_9ALTE (db=UNIREF evalue=5.6e-34 bit_score=149.8 identity=45.1 coverage=96.21621621621622)
seg (db=Seg db_id=seg from=99 to=114)
HNH endonuclease {ECO:0000313|EMBL:ADC61593.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (stra
AMDSBA1_79_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8419..9408)
DNA (990bp) protein (330aa)
phosphate transporter
Phosphate transporter n=2 Tax=Sulfobacillus acidophilus RepID=G8TZK8_9FIRM (db=UNIREF evalue=3.6e-84 bit_score=317.4 identity=50.2 coverage=96.66666666666667)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=105 to=122)
AMDSBA1_79_9
unknown

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comp(10068..10589)
DNA (522bp) protein (174aa)
seg (db=Seg db_id=seg from=52 to=58)
seg (db=Seg db_id=seg from=159 to=173)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=23 evalue=6.0)
AMDSBA1_79_10
unknown

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comp(10759..11160)
DNA (402bp) protein (134aa)
10759..11160 - ( gc_cont=0.565)
AMDSBA1_79_11
unknown

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11683..12006
DNA (324bp) protein (108aa)
seg (db=Seg db_id=seg from=63 to=68)
AMDSBA1_79_12
unknown

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12194..12379
DNA (186bp) protein (62aa)
seg (db=Seg db_id=seg from=16 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
AMDSBA1_79_13
unknown

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comp(12630..12869)
DNA (240bp) protein (80aa)
12630..12869 - ( gc_cont=0.521)
Displaying 13 items

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