ggKbase home page

AMDSBA1_6_15

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 14151..14417

Top 3 Functional Annotations

Value Algorithm Source
Excinuclease ABC C subunit domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 75.0
  • Bit_score: 96
  • Evalue 3.20e-18
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=10 to=82 evalue=7.1e-12 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.10e-12
(db=HMMPfam db_id=PF01541 from=12 to=80 evalue=1.3e-10 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.30e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 267
ATGCATTTGATCATGCCCGTTCTTGAACAGCGGTGGTGGGTCTATATTCTCAGATGCCAGGGAGATGTGTTTTACACCGGGATCACCACGGATATGGCCCGGCGGTTTAAAGCGCATCAAGAAGGCATGGGGGCGAGGTATACCCGTTCCCACAAACCCGTTGAGATTTGGTGTCAGTTTGGCCCCTACACCAAAAACCAGGCGCTGCGGGAAGAACGCCGCATTAAAAAACTGTCTCATCAGGCAAAGGAGGAATTGAGAGCTTAG
PROTEIN sequence
Length: 89
MHLIMPVLEQRWWVYILRCQGDVFYTGITTDMARRFKAHQEGMGARYTRSHKPVEIWCQFGPYTKNQALREERRIKKLSHQAKEELRA*