| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
|
AMDSBA1_6_1
unknown
|
Not on your lists |
comp(101..547)
|
seg (db=Seg db_id=seg from=23 to=35)
|
|
|
AMDSBA1_6_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(714..1559)
|
cytochrome oxidase assembly
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=91 to=105)
transmembrane_regions (db=TMHMM db_id=tmhmm from=241 to=258)
|
|
|
AMDSBA1_6_3
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria
|
Not on your lists |
comp(1704..2267)
|
pyruvate/ketoisovalerate oxidoreductase subunit gamma
2-oxoglutarate synthase subunit korC n=1 Tax=Archaeoglobus fulgidus DSM 4304 RepID=KORC_ARCFU (db=UNIREF evalue=5.1e-19 bit_score=100.1 identity=35.3 coverage=87.7659574468085)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=13 to=33)
|
|
|
AMDSBA1_6_4
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria
|
Not on your lists |
comp(2260..3093)
|
2-oxoglutarate synthase (EC:1.2.7.3)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZ90_9GAMM (db=UNIREF evalue=1.1e-44 bit_score=186.0 identity=38.7 coverage=89.568345323741)
Thiamin diphosphate-binding fold (THDP-binding) (db=superfamily db_id=SSF52518 from=17 to=267 evalue=3.3e-71)
no description (db=Gene3D db_id=G3DSA:3.40.50.970 from=21 to=210 evalue=3.7e-64)
|
|
|
AMDSBA1_6_5
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria
|
Not on your lists |
comp(3086..4237)
|
2-oxoglutarate synthase (EC:1.2.7.3)
2-oxoglutarate synthase subunit korA n=1 Tax=Archaeoglobus fulgidus DSM 4304 RepID=KORA_ARCFU (db=UNIREF evalue=2.8e-56 bit_score=224.9 identity=59.8 coverage=47.65625)
Thiamin diphosphate-binding fold (THDP-binding) (db=superfamily db_id=SSF52518 from=1 to=250 evalue=1.3e-73)
seg (db=Seg db_id=seg from=275 to=281)
|
|
|
AMDSBA1_6_6
uncultured Acetothermia bacterium, Acetothermia, Bacteria
|
Not on your lists |
comp(4264..6006)
|
seg (db=Seg db_id=seg from=470 to=486)
seg (db=Seg db_id=seg from=161 to=177)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=508 to=519 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=539 to=550 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
|
|
|
AMDSBA1_6_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
6691..8016
|
cytosine/purines uracil thiamine allantoin permease
Cytosine/purines n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WJE6_9BURK (db=UNIREF evalue=6.4e-36 bit_score=157.5 identity=28.0 coverage=82.57918552036199)
transmembrane_regions (db=TMHMM db_id=tmhmm from=374 to=396)
transmembrane_regions (db=TMHMM db_id=tmhmm from=409 to=426)
|
|
|
AMDSBA1_6_8
unknown
|
Not on your lists |
comp(8584..8793)
|
8584..8793 - ( gc_cont=0.557)
|
|
|
AMDSBA1_6_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(8819..9469)
|
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8I4C9_SULAT (db=UNIREF evalue=1.6e-56 bit_score=224.9 identity=53.6 coverage=95.39170506912443)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=29)
seg (db=Seg db_id=seg from=197 to=210)
|
|
|
AMDSBA1_6_10
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria
|
Not on your lists |
9567..10979
|
hypothetical protein
Putative uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WY83_9BRAD (db=UNIREF evalue=1.9e-22 bit_score=112.8 identity=25.1 coverage=91.29511677282377)
seg (db=Seg db_id=seg from=11 to=23)
seg (db=Seg db_id=seg from=98 to=109)
|
|
|
AMDSBA1_6_11
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
11037..12455
|
arginine decarboxylase (EC:4.1.1.19)
arginine decarboxylase (EC:4.1.1.19)
Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9B6_9FIRM (db=UNIREF evalue=9.8e-35 bit_score=153.7 identity=28.4 coverage=89.4291754756871)
seg (db=Seg db_id=seg from=408 to=420)
|
|
|
AMDSBA1_6_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
12428..13054
|
tmk; thymidylate kinase
Thymidylate kinase n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=KTHY_CHLP8 (db=UNIREF evalue=1.5e-32 bit_score=145.2 identity=40.6 coverage=94.73684210526315)
seg (db=Seg db_id=seg from=67 to=80)
THYMIDYLATE_KINASE (db=PatternScan db_id=PS01331 from=96 to=108 evalue=0.0 interpro_id=IPR018095 interpro_description=Thymidylate kinase, conserved site GO=Molecular Function: thymidylate kinase activity (GO:0004798), Molecular Function: ATP binding (GO:0005524), Biological Process: dTDP biosynthetic process (GO:0006233))
|
|
|
AMDSBA1_6_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
13141..13467
|
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TW81_9FIRM (db=UNIREF evalue=1.2e-44 bit_score=184.5 identity=79.6 coverage=98.1651376146789)
hypothetical protein
(db=HMMPfam db_id=PF06153 from=1 to=108 evalue=1.6e-38 interpro_id=IPR010375 interpro_description=Protein of unknown function DUF970)
GlnB-like (db=superfamily db_id=SSF54913 from=1 to=108 evalue=4.1e-09 interpro_id=IPR011322 interpro_description=Nitrogen regulatory PII-like, alpha/beta)
|
|
|
AMDSBA1_6_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
13433..14176
|
holB; DNA-directed DNA polymerase
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=8 to=168 evalue=1.5e-25)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=27 to=167 evalue=3.1e-22)
REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT (db=HMMPanther db_id=PTHR11669 from=85 to=164 evalue=4.0e-13)
|
|
|
AMDSBA1_6_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
14151..14417
|
Excinuclease ABC C subunit domain-containing protein
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=10 to=82 evalue=7.1e-12 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
(db=HMMPfam db_id=PF01541 from=12 to=80 evalue=1.3e-10 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
Excinuclease ABC C subunit domain protein n=1 Tax=Sulfobacillus acidophilus (strain ATCC 700253 / DSM 10332 / NAL) RepID=G8TW83_SULAD
|
|
|
AMDSBA1_6_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
14417..15280
|
ribosomal RNA small subunit methyltransferase I
Ribosomal RNA small subunit methyltransferase I n=2 Tax=Sulfobacillus acidophilus RepID=G8TW84_9FIRM (db=UNIREF evalue=8.3e-77 bit_score=292.7 identity=52.5 coverage=95.13888888888889)
Tetrapyrrole methylase (db=superfamily db_id=SSF53790 from=12 to=229 evalue=1.6e-66 interpro_id=IPR000878 interpro_description=Tetrapyrrole methylase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
TIGR00096: putative S-adenosylmethionine-d (db=HMMTigr db_id=TIGR00096 from=14 to=283 evalue=1.5e-64 interpro_id=IPR008189 interpro_description=rRNA small subunit methyltransferase I GO=Molecular Function: methyltransferase activity (GO:0008168))
|
|
|
AMDSBA1_6_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(15277..15525)
|
AbrB family transcriptional regulator
Transcriptional regulator, AbrB family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPS8_9FIRM (db=UNIREF evalue=9.2e-29 bit_score=131.3 identity=69.5 coverage=97.59036144578313)
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=1 to=51 evalue=8.3e-13)
|
|
|
AMDSBA1_6_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(15763..17304)
|
Na+/solute symporter
Na+/solute symporter
Na+/solute symporter n=2 Tax=Sulfobacillus acidophilus RepID=G8TVF7_9FIRM (db=UNIREF evalue=2.2e-117 bit_score=428.3 identity=47.0 coverage=96.3035019455253)
seg (db=Seg db_id=seg from=474 to=487)
|
|
|
AMDSBA1_6_19
unknown
|
Not on your lists |
17467..17631
|
17467..17631 + ( gc_cont=0.539)
|
|
|
AMDSBA1_6_20
Paenibacillus macerans, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
comp(17991..19265)
|
major Facilitator Superfamily protein
Transmembrane transporter n=1 Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CDC1_MYCTH (db=UNIREF evalue=2.2e-17 bit_score=95.9 identity=24.6 coverage=87.05882352941177)
transmembrane_regions (db=TMHMM db_id=tmhmm from=320 to=342)
transmembrane_regions (db=TMHMM db_id=tmhmm from=362 to=384)
|
|
|
AMDSBA1_6_21
unknown
|
Not on your lists |
19935..20087
|
seg (db=Seg db_id=seg from=12 to=23)
|
|
|
AMDSBA1_6_22
Bacillus weihenstephanensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
|
Not on your lists |
20388..20684
|
DNA binding protein n=1 Tax=Bacillus thuringiensis serovar andalousiensis BGSC 4AW1 RepID=C3GCL7_BACTU (db=UNIREF evalue=3.4e-14 bit_score=83.2 identity=42.2 coverage=82.82828282828282)
(db=HMMPfam db_id=PF02810 from=62 to=78 evalue=3.0e-06 interpro_id=IPR004027 interpro_description=SEC-C motif)
DNA-binding protein {ECO:0000313|EMBL:KEZ79539.1}; TaxID=86662 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus weihenstephanensis.;
putative DNA binding protein
|
|
|
AMDSBA1_6_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
21248..23266
|
methionyl-tRNA synthetase (EC:6.1.1.10)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=3 Tax=Clostridium acetobutylicum RepID=SYM_CLOAB (db=UNIREF evalue=8.4e-181 bit_score=639.4 identity=50.4 coverage=95.39375928677563)
seg (db=Seg db_id=seg from=552 to=569)
|
|
|
AMDSBA1_6_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
23263..24027
|
tatD; TatD family hydrolase
Hydrolase, TatD family (Fragment) n=1 Tax=delta proteobacterium NaphS2 RepID=D8EZ04_9DELT (db=UNIREF evalue=1.5e-50 bit_score=205.3 identity=42.4 coverage=96.07843137254902)
TATD_2 (db=PatternScan db_id=PS01090 from=126 to=136 evalue=0.0 interpro_id=IPR018228 interpro_description=Deoxyribonuclease, TatD-related, conserved site GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
TIGR00010: hydrolase, TatD family (db=HMMTigr db_id=TIGR00010 from=6 to=254 evalue=2.1e-93 interpro_id=IPR015991 interpro_description=Deoxyribonuclease TatD, bacterial-type GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
|
|
|
AMDSBA1_6_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
24143..25126
|
hypothetical protein
hypothetical protein
3D domain protein n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1K8_9FIRM (db=UNIREF evalue=1.4e-16 bit_score=92.8 identity=44.2 coverage=29.878048780487802)
seg (db=Seg db_id=seg from=13 to=29)
|
|
|
AMDSBA1_6_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
25149..26009
|
ksgA; dimethyladenosine transferase
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LVN1_HALO1 (db=UNIREF evalue=8.6e-26 bit_score=123.2 identity=32.5 coverage=96.16724738675958)
seg (db=Seg db_id=seg from=57 to=73)
RRNA_A_DIMETH (db=PatternScan db_id=PS01131 from=53 to=80 evalue=0.0 interpro_id=IPR020596 interpro_description=Ribosomal RNA adenine methylase transferase, conserved site GO=Biological Process: rRNA modification (GO:0000154), Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179), Molecular Function: rRNA methyltransferase activity (GO:0008649))
|
|
|
AMDSBA1_6_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
26021..26491
|
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TW90_9FIRM (db=UNIREF evalue=2.2e-63 bit_score=247.3 identity=78.8 coverage=98.72611464968153)
(db=HMMPfam db_id=PF04308 from=14 to=156 evalue=7.8e-56 interpro_id=IPR007405 interpro_description=Bacteriophage KVP40, Orf299)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TW90_SULAD
|
|
|
AMDSBA1_6_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
27159..27422
|
Putative uncharacterized protein n=1 Tax=Sulfobacillus acidophilus DSM 10332 RepID=G8TW91_9FIRM (db=UNIREF evalue=5.9e-34 bit_score=148.7 identity=87.4 coverage=94.31818181818183)
hypothetical protein
seg (db=Seg db_id=seg from=53 to=69)
coiled-coil (db=Coil db_id=coil from=7 to=28 evalue=NA)
|
|
|
AMDSBA1_6_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
27490..28392
|
cyanophycinase (EC:3.4.15.6)
Cyanophycinase n=1 Tax=Pseudomonas anguilliseptica RepID=CPHE_PSEAG (db=UNIREF evalue=1.5e-12 bit_score=79.3 identity=27.3 coverage=82.05980066445183)
seg (db=Seg db_id=seg from=152 to=164)
seg (db=Seg db_id=seg from=200 to=207)
|
|
|
AMDSBA1_6_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
28385..31018
|
cphA; cyanophycin synthetase
cphA; cyanophycin synthetase
Cyanphycin synthetase n=2 Tax=Chroococcales RepID=Q9F2I7_SYNEL (db=UNIREF evalue=2.8e-168 bit_score=598.2 identity=40.4 coverage=95.67198177676538)
seg (db=Seg db_id=seg from=830 to=841)
|
