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AMDSBA1_7_30

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(35325..35573)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 81.0
  • Bit_score: 118
  • Evalue 9.70e-25
Cold-shock DNA-binding domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUZ1_ALIAD (db=UNIREF evalue=1.9e-10 bit_score=70.5 identity=46.7 coverage=86.74698795180723) similarity UNIREF
DB: UNIREF
  • Identity: 46.7
  • Coverage: 86.75
  • Bit_score: 70
  • Evalue 1.90e-10
(db=HMMPfam db_id=PF00313 from=3 to=77 evalue=4.7e-15 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.70e-15

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Taxonomy

Paenibacillus sp. FSL H7-0357 → Paenibacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 249
ATGCCCAGACGAAAAGGTGTTGTGAAGTGGTTCAAAGAAGAAAAGGGCTATGGCCGCATTATGTTGGACGGACAAGACGGTCATCATGTCTTCGTTCACTTCAGTGCAATTCGGCCTAATCCTCGAAGATTTCCCAATGGCTATCGCTTTCTCAAGCCAGGTCAGAAAGTGACATTTCACTTAATCGAGACAAATGCCACAGATAGTCAACGATTAACAGCCGTCGACGTTGAAATCTTGTCTGACTAG
PROTEIN sequence
Length: 83
MPRRKGVVKWFKEEKGYGRIMLDGQDGHHVFVHFSAIRPNPRRFPNGYRFLKPGQKVTFHLIETNATDSQRLTAVDVEILSD*