Alias: AMDSBA1_C6
| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
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AMDSBA1_7_1
Caldithrix abyssi, Caldithrix, Bacteria
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Not on your lists |
1..852
----------------- DNA (852bp) protein (284aa) |
Putative uncharacterized protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CAN6_9PLAN (db=UNIREF evalue=1.2e-59 bit_score=235.7 identity=46.6 coverage=95.4225352112676)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=136 to=157 evalue=NA)
seg (db=Seg db_id=seg from=109 to=122)
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AMDSBA1_7_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
1763..2650
----------------- DNA (888bp) protein (296aa) |
metallophosphoesterase
Metallophosphoesterase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2I1_ACIFD (db=UNIREF evalue=4.7e-43 bit_score=180.6 identity=38.7 coverage=90.87837837837837)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=3 to=224 evalue=2.5e-26)
no description (db=Gene3D db_id=G3DSA:3.60.21.10 from=3 to=223 evalue=1.0e-06)
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AMDSBA1_7_3
unknown
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Not on your lists |
2838..3233
----------------- DNA (396bp) protein (132aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=79 to=101)
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AMDSBA1_7_4
unknown
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Not on your lists |
comp(3651..4097)
----------------- DNA (447bp) protein (149aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=75)
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AMDSBA1_7_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
4564..6003
----------------- DNA (1440bp) protein (480aa) |
major facilitator superfamily protein
rbh
High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter n=2 Tax=Komagataella pastoris RepID=C4R3N5_PICPG (db=UNIREF evalue=1.2e-27 bit_score=130.2 identity=37.5 coverage=40.416666666666664)
transmembrane_regions (db=TMHMM db_id=tmhmm from=333 to=355)
transmembrane_regions (db=TMHMM db_id=tmhmm from=395 to=417)
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AMDSBA1_7_6
unknown
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Not on your lists |
6117..6344
----------------- DNA (228bp) protein (76aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
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AMDSBA1_7_7
unknown
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Not on your lists |
6433..7011
----------------- DNA (579bp) protein (193aa) |
6433..7011 + ( gc_cont=0.539)
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AMDSBA1_7_8
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria
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Not on your lists |
7283..8617
----------------- DNA (1335bp) protein (445aa) |
extracellular solute-binding protein
Glycerol-3-phosphate ABC transporter n=7 Tax=Lactobacillus crispatus RepID=D5GXN7_LACCS (db=UNIREF evalue=3.9e-17 bit_score=95.1 identity=25.4 coverage=77.97752808988764)
seg (db=Seg db_id=seg from=17 to=29)
seg (db=Seg db_id=seg from=322 to=330)
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AMDSBA1_7_9
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria
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Not on your lists |
8629..9612
----------------- DNA (984bp) protein (328aa) |
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermotoga lettingae TMO RepID=A8F6K3_THELT (db=UNIREF evalue=7.0e-40 bit_score=170.2 identity=34.3 coverage=87.8048780487805)
seg (db=Seg db_id=seg from=299 to=311)
seg (db=Seg db_id=seg from=265 to=273)
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AMDSBA1_7_10
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria
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Not on your lists |
9661..10521
----------------- DNA (861bp) protein (287aa) |
sugar ABC transporter permease
Inner membrane component of binding-protein-dependent transport system n=1 Tax=Ochrobactrum intermedium LMG 3301 RepID=C4WQD4_9RHIZ (db=UNIREF evalue=1.6e-35 bit_score=155.6 identity=34.0 coverage=89.19860627177701)
transmembrane_regions (db=TMHMM db_id=tmhmm from=143 to=160)
transmembrane_regions (db=TMHMM db_id=tmhmm from=243 to=265)
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AMDSBA1_7_11
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria
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Not on your lists |
comp(11204..12439)
----------------- DNA (1236bp) protein (412aa) |
major facilitator transporter
Major facilitator superfamily MFS_1 n=1 Tax=Burkholderia phymatum STM815 RepID=B2JM94_BURP8 (db=UNIREF evalue=2.0e-55 bit_score=222.2 identity=38.8 coverage=93.44660194174757)
transmembrane_regions (db=TMHMM db_id=tmhmm from=299 to=321)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
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AMDSBA1_7_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(12727..13698)
----------------- DNA (972bp) protein (324aa) |
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
ABC-type oligopeptide transport system ATPase component n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P4G1_VIBME (db=UNIREF evalue=2.0e-63 bit_score=248.4 identity=42.9 coverage=97.8395061728395)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=7 to=321 evalue=3.4e-123)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=152 to=166 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
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AMDSBA1_7_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(13688..14755)
----------------- DNA (1068bp) protein (356aa) |
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=4 Tax=Mesorhizobium RepID=G4K3U7_9RHIZ (db=UNIREF evalue=2.7e-37 bit_score=161.8 identity=34.9 coverage=86.79775280898876)
seg (db=Seg db_id=seg from=135 to=146)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=5 to=321 evalue=3.8e-114)
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AMDSBA1_7_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(14752..15696)
----------------- DNA (945bp) protein (315aa) |
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Ferroglobus placidus DSM 10642 RepID=D3RYT6_FERPA (db=UNIREF evalue=1.8e-32 bit_score=145.6 identity=35.2 coverage=79.68253968253968)
seg (db=Seg db_id=seg from=136 to=149)
seg (db=Seg db_id=seg from=39 to=55)
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AMDSBA1_7_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(15693..16679)
----------------- DNA (987bp) protein (329aa) |
ABC transporter
ABC-type transporter, integral membrane subunit n=2 Tax=Sulfobacillus acidophilus RepID=G8TSA4_9FIRM (db=UNIREF evalue=1.7e-150 bit_score=537.7 identity=77.1 coverage=99.3920972644377)
transmembrane_regions (db=TMHMM db_id=tmhmm from=188 to=210)
seg (db=Seg db_id=seg from=146 to=163)
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AMDSBA1_7_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(16756..18402)
----------------- DNA (1647bp) protein (549aa) |
ABC transporter periplasmic protein
Extracellular solute-binding protein family 5 n=1 Tax=Thermotoga thermarum DSM 5069 RepID=F7YUR1_9THEM (db=UNIREF evalue=1.2e-15 bit_score=90.5 identity=24.8 coverage=49.72677595628415)
seg (db=Seg db_id=seg from=522 to=536)
seg (db=Seg db_id=seg from=8 to=27)
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AMDSBA1_7_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(18419..20806)
----------------- DNA (2388bp) protein (796aa) |
beta-galactosidase (EC:3.2.1.23)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=2 Tax=Sulfobacillus acidophilus RepID=G8TSA2_9FIRM (db=UNIREF evalue=3.2e-195 bit_score=687.6 identity=44.7 coverage=95.47738693467338)
seg (db=Seg db_id=seg from=466 to=483)
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AMDSBA1_7_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(20784..21818)
----------------- DNA (1035bp) protein (345aa) |
LacI family transcriptional regulator
Transcriptional regulator n=1 Tax=Spirochaeta africana DSM 8902 RepID=H9UHX0_SPIAZ (db=UNIREF evalue=6.1e-26 bit_score=124.0 identity=30.3 coverage=94.4927536231884)
HTH_LACI_1 (db=PatternScan db_id=PS00356 from=4 to=22 evalue=0.0 interpro_id=IPR000843 interpro_description=Transcription regulator HTH, LacI GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Periplasmic binding protein-like I (db=superfamily db_id=SSF53822 from=60 to=340 evalue=7.4e-71)
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AMDSBA1_7_19
Bacillus lehensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(22597..23058)
----------------- DNA (462bp) protein (154aa) |
seg (db=Seg db_id=seg from=65 to=86)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=60 evalue=6.5e-07 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
(db=HMMPfam db_id=PF01381 from=6 to=45 evalue=2.2e-05 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=1 to=45 evalue=9.5e-05 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
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AMDSBA1_7_20
unknown
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Not on your lists |
comp(23302..23463)
----------------- DNA (162bp) protein (54aa) |
23302..23463 - ( gc_cont=0.488)
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AMDSBA1_7_21
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
24654..26123
----------------- DNA (1470bp) protein (490aa) |
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase
Glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent n=13 Tax=Clostridium RepID=B1RA01_CLOPF (db=UNIREF evalue=1.4e-129 bit_score=468.8 identity=49.5 coverage=93.06122448979592)
ALDEHYDE_DEHYDR_CYS (db=PatternScan db_id=PS00070 from=289 to=300 evalue=0.0 interpro_id=IPR016160 interpro_description=Aldehyde dehydrogenase, conserved site GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
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AMDSBA1_7_22
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria
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Not on your lists |
26842..27654
----------------- DNA (813bp) protein (271aa) |
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=10 to=263 evalue=2.7e-47)
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=1 to=263 evalue=3.1e-44)
ALPHA/BETA HYDROLASE RELATED (db=HMMPanther db_id=PTHR10992 from=9 to=262 evalue=1.7e-36)
VALACYCLOVIR HYDROLASE (db=HMMPanther db_id=PTHR10992:SF17 from=9 to=262 evalue=1.7e-36)
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AMDSBA1_7_23
unknown
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Not on your lists |
comp(27667..28074)
----------------- DNA (408bp) protein (136aa) |
27667..28074 - ( gc_cont=0.434)
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AMDSBA1_7_24
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
28322..28882
----------------- DNA (561bp) protein (187aa) |
hypothetical protein LGrbi_13509 n=1 Tax=Lentibacillus sp. Grbi RepID=UPI0002625CB4 (db=UNIREF evalue=3.7e-17 bit_score=94.0 identity=31.5 coverage=93.04812834224599)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=53)
seg (db=Seg db_id=seg from=163 to=186)
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AMDSBA1_7_25
unknown
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Not on your lists |
29167..29628
----------------- DNA (462bp) protein (154aa) |
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=5.0)
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AMDSBA1_7_26
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(30392..32041)
----------------- DNA (1650bp) protein (550aa) |
hypothetical protein
hypothetical protein
ABC transporter, permease protein n=10 Tax=Clostridium RepID=B1KWX6_CLOBM (db=UNIREF evalue=1.2e-97 bit_score=362.8 identity=33.4 coverage=98.72727272727273)
transmembrane_regions (db=TMHMM db_id=tmhmm from=431 to=450)
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AMDSBA1_7_27
Paenibacillus sp. P1XP2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(32100..32891)
----------------- DNA (792bp) protein (264aa) |
ABC transporter related protein
Protein McbF n=4 Tax=Escherichia coli RepID=MCBF_ECOLX (db=UNIREF evalue=4.1e-14 bit_score=84.3 identity=24.8 coverage=84.84848484848484)
seg (db=Seg db_id=seg from=89 to=103)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=10 to=260 evalue=2.1e-81)
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AMDSBA1_7_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
33393..34361
----------------- DNA (969bp) protein (323aa) |
aldo/keto reductase
rbh
aldo/keto reductase
rbh
Aldo/keto reductase n=2 Tax=Sulfobacillus acidophilus RepID=G8TS68_9FIRM (db=UNIREF evalue=6.8e-112 bit_score=409.5 identity=63.4 coverage=97.21362229102168)
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AMDSBA1_7_29
unknown
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Not on your lists |
comp(34763..35005)
----------------- DNA (243bp) protein (81aa) |
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
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AMDSBA1_7_30
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria
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Not on your lists |
comp(35325..35573)
----------------- DNA (249bp) protein (83aa) |
hypothetical protein
Cold-shock DNA-binding domain protein n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WUZ1_ALIAD (db=UNIREF evalue=1.9e-10 bit_score=70.5 identity=46.7 coverage=86.74698795180723)
(db=HMMPfam db_id=PF00313 from=3 to=77 evalue=4.7e-15 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=3 to=81 evalue=2.9e-14 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676))
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