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AMDSBA1_7_45

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(58710..59141)

Top 3 Functional Annotations

Value Algorithm Source
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=9 to=108 evalue=4.1e-19) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.10e-19
(db=HMMPfam db_id=PF00392 from=18 to=81 evalue=7.4e-13 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.40e-13
no description (db=HMMSmart db_id=SM00345 from=22 to=81 evalue=1.4e-11 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.40e-11

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Taxonomy

BJP_08E140C01_Clostridiales_46_19 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 432
ATGAACAAGAACAAGCCAAAAATTACTCTGGAAACCCAATCAGGCGTACCGCTTTACGTACAGATCCGCGACCAAATCAAAACGGCTATTCAGTCAGGGCAAATCCCGCCGCAGCACCGTCTGCAAACCATACGGGAATTAGCCCGTAACCTGAAGATTAATCCCAACACAGTAGCGCGGGCCTACCGCGAATTGGAATACCAAGGATATCTGAAAACTCTCTCGGGCCGCGGAACCTTTGTCATAGACAAAGATCCGGTGGACAGGGATTTCGAACCGGATTTTTGGATTATCGCCGAACTCGAAGACTGTCTAAAACGCATCCAAAATGAATGGCATGTGCCCCCCGATCGATTGCTTCACATGGCCACACATGCGGTAGAAAGAATCTCTGCCGAAAAAATTCCCACCAAGCTGGGTGACAAAAGATGA
PROTEIN sequence
Length: 144
MNKNKPKITLETQSGVPLYVQIRDQIKTAIQSGQIPPQHRLQTIRELARNLKINPNTVARAYRELEYQGYLKTLSGRGTFVIDKDPVDRDFEPDFWIIAELEDCLKRIQNEWHVPPDRLLHMATHAVERISAEKIPTKLGDKR*