ggKbase home page

AMDSBA1_7_69

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 85460..86761

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=23 to=427 evalue=1.6e-69) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.60e-69
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=34 to=191 evalue=1.2e-28) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.20e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Armatimonadetes_69_19_curated → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1302
GTGAACAAAAAATCATCAATTATATTTTCGCTTCTCAGCACGGTAGTCATGTCGTCTGCTTTGGCTGGTTGCGGCCCTGGTGTATCGCATAAGACTGCACACAGTACCAGCCCTGTTACCATTACCTTTTGGAATGAAATGACGGGGCCCTATAAAGTTGCTTTAGCCGGAGAAATTCATCAATTTGAAAAGTCGCATCCTCAGATTACTGTCAACGACATCGTCGTGCCCAATGATGCCGCTTTGGAGCCAAAGTTGTTGACTGCTATCGTTGCGGGCAATCCTCCGACGTTGTCACAAATGAACCCGCCATGGGCCACCGGGTTTATCCAAACACACAGCTTAATCAATCTGAACCCTCTGATTAAAGGACCTCACGGATTTTCGTTGACGCCATTTTACCCTAATCTGCTCAAGCCGGGGAAATGGCCGAATGGGGATCAATATCTGCTGCCCTTCAATCTCGGTGCCGCCATTATGTATTACAACAAAAATGCTTTCGACAACGCTGGAATTACCGCTCCGCCTAAGACCTGGACACAATTTGCCCGAGATGCCGCCAAGTTGTCCGGATCGGGCAAACAGGCCTTTGCCATTACCTTGGTACACACCTATCCGTGGCTTGCATTCTTTGACCAGGCGGCCGGAAATTTTGTGGGTTCCAACGGCATGCCGAATAAAGCAGCTTTTTCTTCTCACGGACCCGCAGTTAAAGCTTTAACCTTATGGAGTAATATGGTTAAAAACGGGTCTGCGGTATTAACTCACGGTTATGCGTCCCAAACTGACTTTGCCAACGAAACCAGCTCCATCCTTATTGGGACGACGGGTTTTTATCCATATGTGCAGGCGGCGGTGGGAAACAAATTTACTCTGGCGGAAGCCCCATTGCCTCACGATGTTCGCCACGCGACGTCTATGTTCGGAGGATATCTAGGAATATTTGCTAAATCAACGCCCAGTCAACAACGTGCCGCTTTTTCCTTTGTGAAATATCTCACCTCTAAAACAGGGCAACTTTATTGGATGGAGCACAGTCAGGGATATCTTCCGGTGCGCACGGACGTGGCTCAAGCGGCTACAGCCTTTCTGAAAACCCATCCGGCTCAACGGGTCTCATTAAGTGTATTGCCTACGGCTGTCGCAGAACCGAAGGTAGCCTGGTGGGATCAATTCTCTCATGAGGTTTTACTTAATGCTATTGTTGCCGTATTGATCAATAAAGAAACTCCGGTACAAGCTATGCACGCTGCCTACCAGCAAGCTGTCAAGTTAGCTCGAAAGGACGGAACTTATCAGTAA
PROTEIN sequence
Length: 434
VNKKSSIIFSLLSTVVMSSALAGCGPGVSHKTAHSTSPVTITFWNEMTGPYKVALAGEIHQFEKSHPQITVNDIVVPNDAALEPKLLTAIVAGNPPTLSQMNPPWATGFIQTHSLINLNPLIKGPHGFSLTPFYPNLLKPGKWPNGDQYLLPFNLGAAIMYYNKNAFDNAGITAPPKTWTQFARDAAKLSGSGKQAFAITLVHTYPWLAFFDQAAGNFVGSNGMPNKAAFSSHGPAVKALTLWSNMVKNGSAVLTHGYASQTDFANETSSILIGTTGFYPYVQAAVGNKFTLAEAPLPHDVRHATSMFGGYLGIFAKSTPSQQRAAFSFVKYLTSKTGQLYWMEHSQGYLPVRTDVAQAATAFLKTHPAQRVSLSVLPTAVAEPKVAWWDQFSHEVLLNAIVAVLINKETPVQAMHAAYQQAVKLARKDGTYQ*