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AMDSBA1_15_47

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 55980..56684

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 224.0
  • Bit_score: 195
  • Evalue 1.40e-47
Transcriptional regulator n=4 Tax=Enterococcus casseliflavus RepID=C9ABX4_ENTCA (db=UNIREF evalue=4.6e-25 bit_score=120.6 identity=33.6 coverage=90.63829787234042) similarity UNIREF
DB: UNIREF
  • Identity: 33.6
  • Coverage: 90.64
  • Bit_score: 120
  • Evalue 4.60e-25
(db=HMMPfam db_id=PF00392 from=15 to=76 evalue=2.6e-16 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.60e-16

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Taxonomy

Alicyclobacillus acidoterrestris → Alicyclobacillus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 705
ATGATAGGCGGAGTGCGATTGCGAGAAGAAAAGCGTTCGCTAGGTGAACAGGCGTATTTATCTTTACGTGAAGCAATCGTTACGTTGCGCCTGAAACCTGGACAAATGGTTTATGAATCGGAGTTGGCTGAATTGCTGGACATGAGCCGTACTCCCATTAGAGAAGCTATCCGTACTTTGGTGGTGGATGACCTTATTGAAGTGTTGCCACAGCGCGGGATGAAAGTTTCCTTGATCTCCACGACTAAAGTCGAAGAGGCGCGCGTCATTCGCGAAGTACTTGAAATTGCTTCACTGAAAGGCGGTATAGACCGATGGAAGAACTTCTCTGACACTCATGATGAACTGGCGGCCGTAGTTGAATCTTGCCTAGCCTGGCAAAAACGAGCGGCTGCACGTGGTGACATTAAAGATTTTCTGGATGCAGATGAGGCTTTTCACCGTGCCATTGTTATGGTTGGAAAAAACCGAACGCTGCAAAGCGTGGTGGGACAAATGCGTGCTCATTTGAACAGGGTACGAGTGTTGTCTGTAGGAAAGTTGGAGAACTTTGATGTTCTCCTCGATGAACATAATGCCCTGTACCAAAATATTAAGAAAGGGGATCAATCTGAAGCCTTGTCTATTTTGATGCACCATCTGCGCCGTTTAGTTACGGATATGCCGCTTGTGCAAGCAGCGTATCCCGATTATTTTACGTCGTAA
PROTEIN sequence
Length: 235
MIGGVRLREEKRSLGEQAYLSLREAIVTLRLKPGQMVYESELAELLDMSRTPIREAIRTLVVDDLIEVLPQRGMKVSLISTTKVEEARVIREVLEIASLKGGIDRWKNFSDTHDELAAVVESCLAWQKRAAARGDIKDFLDADEAFHRAIVMVGKNRTLQSVVGQMRAHLNRVRVLSVGKLENFDVLLDEHNALYQNIKKGDQSEALSILMHHLRRLVTDMPLVQAAYPDYFTS*