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AMDSBA1_18_26

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(29435..30088)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator, NarL-family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JV68_9GAMM (db=UNIREF evalue=1.4e-20 bit_score=105.5 identity=30.8 coverage=95.41284403669725) similarity UNIREF
DB: UNIREF
  • Identity: 30.8
  • Coverage: 95.41
  • Bit_score: 105
  • Evalue 1.40e-20
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=166 to=193 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
CheY-like (db=superfamily db_id=SSF52172 from=2 to=186 evalue=9.3e-35 interpro_id=IPR011006 interpro_description=CheY-like superfamily) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.30e-35

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 654
TTGTTGGAAAAAGCAAGAGTTATGTTAGTGGATGACCACGCTTTGTTTCGATCGGGAATGGCTTCATTATTGGCCGGTCGTCCAGACATGGAAGTGGTCGGAGAGGCCCAAACGGGCGAAGAAGCCGTGAGGTTAGCCGAAGAGTTGATGCCCGATCTGATTTTGATGGATATTAATATGCCGGGTGATGGAGGGCTGGAAGCAACCCGGATTATCAAAGAGCAGATGCCCTACGTAAGAATCGTGGTATTGACCGCGAGCGACGAAAACGACTTGTTGTTTGAGGCCGTTAAAGCTGGTGCCCAGGGTTATCTCCTCAAACATTTGGACCCGGAACAGTTTTTGGAAGAACTTTCGGCGCAAATTCGGGGTGAAGCCTCTATATCGGGAGATGTGGCCCTCAAGATCATCCGGGCATTTTCCACCCAGGATGTGGAACGCCAGCAGACCCAACTGACAGGACGGGAGCTTGAGGTATTGAAACTGGTTGGAGAAGGATATTCCAATCGTGACATTGCTAGCCGCTTGTTTATATCCGAAAATACGGTAAAAAACCACCTACGCAACATTTTGCAAAAACTTCACTTTGAAAATCGCGTCCAGGCAGCTGCCTATGCGATACGCCGAGGAATCGTGGATCCACATAAGAGTTGA
PROTEIN sequence
Length: 218
LLEKARVMLVDDHALFRSGMASLLAGRPDMEVVGEAQTGEEAVRLAEELMPDLILMDINMPGDGGLEATRIIKEQMPYVRIVVLTASDENDLLFEAVKAGAQGYLLKHLDPEQFLEELSAQIRGEASISGDVALKIIRAFSTQDVERQQTQLTGRELEVLKLVGEGYSNRDIASRLFISENTVKNHLRNILQKLHFENRVQAAAYAIRRGIVDPHKS*