Alias: AMDSBA1_C17
| name | lists | location/seqs | annotations | notes |
|---|---|---|---|---|
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AMDSBA1_18_1
unknown
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Not on your lists |
comp(16..567)
----------------- DNA (552bp) protein (184aa) |
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AMDSBA1_18_2
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
764..1513
----------------- DNA (750bp) protein (250aa) |
type 11 methyltransferase
Methyltransferase type 11 n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=E4M5N2_9FIRM (db=UNIREF evalue=2.1e-36 bit_score=158.3 identity=36.1 coverage=95.6)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=11 to=249 evalue=8.0e-45)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=33 to=211 evalue=5.0e-43)
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AMDSBA1_18_3
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(1859..2719)
----------------- DNA (861bp) protein (287aa) |
3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxybutyryl-CoA dehydrogenase n=2 Tax=Sulfobacillus acidophilus RepID=G8TWG5_9FIRM (db=UNIREF evalue=5.3e-92 bit_score=343.2 identity=62.4 coverage=96.51567944250871)
seg (db=Seg db_id=seg from=84 to=96)
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AMDSBA1_18_4
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(2750..3499)
----------------- DNA (750bp) protein (250aa) |
enoyl-ACP reductase (EC:1.3.1.9)
Hydroxybutyrate dehydrogenase n=1 Tax=Danaus plexippus RepID=G6D6V2_DANPL (db=UNIREF evalue=2.6e-10 bit_score=71.6 identity=25.1 coverage=96.39999999999999)
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=1 to=243 evalue=1.4e-87)
ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE (db=HMMPanther db_id=PTHR19410:SF12 from=1 to=243 evalue=1.4e-87)
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AMDSBA1_18_5
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(3621..4601)
----------------- DNA (981bp) protein (327aa) |
glyoxylate reductase
Phosphoglycerate dehydrogenase-like oxidoreductase n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NUU0_9GAMM (db=UNIREF evalue=1.9e-29 bit_score=135.6 identity=34.5 coverage=81.9571865443425)
seg (db=Seg db_id=seg from=248 to=259)
D_2_HYDROXYACID_DH_3 (db=PatternScan db_id=PS00671 from=225 to=241 evalue=0.0 interpro_id=IPR006140 interpro_description=D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding GO=Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: cofactor binding (GO:0048037), Biological Process: oxidation-reduction process (GO:0055114))
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AMDSBA1_18_6
unknown
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Not on your lists |
comp(4764..4955)
----------------- DNA (192bp) protein (64aa) |
4764..4955 - ( gc_cont=0.500)
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AMDSBA1_18_7
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(6226..7251)
----------------- DNA (1026bp) protein (342aa) |
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWE5_9FIRM (db=UNIREF evalue=3.7e-84 bit_score=317.4 identity=41.5 coverage=98.53801169590643)
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AMDSBA1_18_8
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(7324..8301)
----------------- DNA (978bp) protein (326aa) |
electron transfer flavoprotein alpha subunit apoprotein
electron transfer flavoprotein alpha subunit apoprotein
Electron transfer flavoprotein alpha subunit apoprotein n=2 Tax=Sulfobacillus acidophilus RepID=G8TWE4_9FIRM (db=UNIREF evalue=4.0e-112 bit_score=410.2 identity=64.3 coverage=98.46625766871165)
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AMDSBA1_18_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(8318..9085)
----------------- DNA (768bp) protein (256aa) |
fixA; electron transfer flavoprotein subunit beta
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0IB43_9BACL (db=UNIREF evalue=1.3e-49 bit_score=202.2 identity=43.9 coverage=99.21875)
Electron transfer flavoprotein, beta subunit (db=HMMPIR db_id=PIRSF000090 from=1 to=254 evalue=4.9e-100 interpro_id=IPR012255 interpro_description=Electron transfer flavoprotein, beta subunit GO=Molecular Function: electron carrier activity (GO:0009055))
Adenine nucleotide alpha hydrolases-like (db=superfamily db_id=SSF52402 from=1 to=244 evalue=5.6e-89)
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AMDSBA1_18_10
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(9123..10523)
----------------- DNA (1401bp) protein (467aa) |
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Sulfobacillus acidophilus RepID=G8TWE2_9FIRM (db=UNIREF evalue=3.2e-147 bit_score=527.3 identity=59.1 coverage=96.1456102783726)
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AMDSBA1_18_11
unknown
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Not on your lists |
comp(10605..10805)
----------------- DNA (201bp) protein (67aa) |
10605..10805 - ( gc_cont=0.517)
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AMDSBA1_18_12
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(10892..11866)
----------------- DNA (975bp) protein (325aa) |
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Archaeoglobus fulgidus DSM 4304 RepID=HEM2_ARCFU (db=UNIREF evalue=8.1e-89 bit_score=332.8 identity=51.4 coverage=96.61538461538461)
D_ALA_DEHYDRATASE (db=PatternScan db_id=PS00169 from=240 to=252 evalue=0.0 interpro_id=IPR001731 interpro_description=Porphobilinogen synthase GO=Molecular Function: porphobilinogen synthase activity (GO:0004655), Biological Process: tetrapyrrole biosynthetic process (GO:0033014), Molecular Function: metal ion binding (GO:0046872))
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AMDSBA1_18_13
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(11874..13208)
----------------- DNA (1335bp) protein (445aa) |
cobA-hemD; bifunctional uroporphyrinogen III C2,C7-methyltransferase/uroporphyrinogen III synthase
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E9RV01_9FIRM (db=UNIREF evalue=2.9e-20 bit_score=105.5 identity=29.3 coverage=59.10112359550562)
seg (db=Seg db_id=seg from=263 to=276)
HemD-like (db=superfamily db_id=SSF69618 from=194 to=444 evalue=1.7e-49 interpro_id=IPR003754 interpro_description=Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO=Molecular Function: uroporphyrinogen-III synthase activity (GO:0004852), Biological Process: tetrapyrrole biosynthetic process (GO:0033014))
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AMDSBA1_18_14
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(13221..14162)
----------------- DNA (942bp) protein (314aa) |
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase n=2 Tax=Methanotorris RepID=H1KWN0_9EURY (db=UNIREF evalue=6.1e-41 bit_score=173.7 identity=37.1 coverage=90.76433121019109)
Porphobilinogen deaminase (db=HMMPIR db_id=PIRSF001438 from=15 to=313 evalue=1.2e-123 interpro_id=IPR000860 interpro_description=Tetrapyrrole biosynthesis, hydroxymethylbilane synthase GO=Molecular Function: hydroxymethylbilane synthase activity (GO:0004418), Biological Process: tetrapyrrole biosynthetic process (GO:0033014))
hemC: porphobilinogen deaminase (db=HMMTigr db_id=TIGR00212 from=17 to=308 evalue=3.9e-108 interpro_id=IPR000860 interpro_description=Tetrapyrrole biosynthesis, hydroxymethylbilane synthase GO=Molecular Function: hydroxymethylbilane synthase activity (GO:0004418), Biological Process: tetrapyrrole biosynthetic process (GO:0033014))
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AMDSBA1_18_15
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(14159..14965)
----------------- DNA (807bp) protein (269aa) |
cytochrome c assembly protein
Cytochrome c assembly protein n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RGF0_MOOTA (db=UNIREF evalue=4.6e-29 bit_score=134.0 identity=29.6 coverage=94.05204460966543)
transmembrane_regions (db=TMHMM db_id=tmhmm from=239 to=261)
transmembrane_regions (db=TMHMM db_id=tmhmm from=213 to=232)
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AMDSBA1_18_16
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(14980..16290)
----------------- DNA (1311bp) protein (437aa) |
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=11 Tax=Bacillus RepID=HEM1_BACA2 (db=UNIREF evalue=7.1e-80 bit_score=303.5 identity=38.4 coverage=96.33867276887872)
seg (db=Seg db_id=seg from=298 to=307)
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AMDSBA1_18_17
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(17213..18091)
----------------- DNA (879bp) protein (293aa) |
sucD; succinyl-CoA synthetase subunit alpha
sucD; succinyl-CoA synthetase subunit alpha
Malate--CoA ligase subunit alpha n=8 Tax=Alphaproteobacteria RepID=MTKB_METEA (db=UNIREF evalue=1.2e-67 bit_score=262.3 identity=45.8 coverage=99.31740614334471)
seg (db=Seg db_id=seg from=209 to=221)
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AMDSBA1_18_18
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(18091..19203)
----------------- DNA (1113bp) protein (371aa) |
sucC; succinyl-CoA synthetase subunit beta
Succinyl-CoA ligase [ADP-forming] subunit beta n=18 Tax=Mycobacterium RepID=SUCC_MYCA1 (db=UNIREF evalue=4.8e-61 bit_score=240.7 identity=38.4 coverage=98.92183288409704)
seg (db=Seg db_id=seg from=241 to=257)
SUCCINYL_COA_LIG_3 (db=PatternScan db_id=PS01217 from=241 to=266 evalue=0.0 interpro_id=IPR017866 interpro_description=Succinyl-CoA synthetase, beta subunit, conserved site)
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AMDSBA1_18_19
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(20159..21088)
----------------- DNA (930bp) protein (310aa) |
mdh; malate dehydrogenase
mdh; malate dehydrogenase
Malate dehydrogenase n=3 Tax=Bacteria RepID=C4W9S7_STAWA (db=UNIREF evalue=1.2e-81 bit_score=308.9 identity=50.5 coverage=99.35483870967742)
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AMDSBA1_18_20
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(21120..22334)
----------------- DNA (1215bp) protein (405aa) |
icd; isocitrate dehydrogenase
Isocitrate dehydrogenase [NADP] n=6 Tax=Cyanobacteria RepID=IDH_NOSS1 (db=UNIREF evalue=1.6e-78 bit_score=298.9 identity=53.5 coverage=66.41975308641975)
seg (db=Seg db_id=seg from=13 to=24)
IDH_IMDH (db=PatternScan db_id=PS00470 from=291 to=310 evalue=0.0 interpro_id=IPR019818 interpro_description=Isocitrate/isopropylmalate dehydrogenase, conserved site GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Molecular Function: NAD binding (GO:0051287), Biological Process: oxidation-reduction process (GO:0055114))
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AMDSBA1_18_21
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(22935..24734)
----------------- DNA (1800bp) protein (600aa) |
small GTP-binding protein
small GTP-binding protein
Small GTP-binding protein n=2 Tax=Sulfobacillus acidophilus RepID=G8TVY3_9FIRM (db=UNIREF evalue=3.0e-190 bit_score=670.6 identity=57.3 coverage=99.33333333333333)
transmembrane_regions (db=TMHMM db_id=tmhmm from=391 to=413)
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AMDSBA1_18_22
RIFOXYA1_FULL_Alicyclobacillus_53_8_curated, Firmicutes, Bacteria
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Not on your lists |
25024..26262
----------------- DNA (1239bp) protein (413aa) |
Permeases of the major facilitator superfamily protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B8D2_9BACI (db=UNIREF evalue=9.7e-63 bit_score=246.5 identity=36.1 coverage=96.61016949152543)
transmembrane_regions (db=TMHMM db_id=tmhmm from=382 to=404)
transmembrane_regions (db=TMHMM db_id=tmhmm from=347 to=369)
transmembrane_regions (db=TMHMM db_id=tmhmm from=321 to=340)
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AMDSBA1_18_23
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(26333..28345)
----------------- DNA (2013bp) protein (671aa) |
4fe-4S ferredoxin, iron-sulfur binding domain-containing protein
4fe-4S ferredoxin, iron-sulfur binding domain-containing protein
Iron-sulfur binding reductase n=1 Tax=Archaeoglobus fulgidus DSM 4304 RepID=O28501_ARCFU (db=UNIREF evalue=8.1e-59 bit_score=234.2 identity=37.3 coverage=48.58420268256334)
seg (db=Seg db_id=seg from=142 to=157)
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AMDSBA1_18_24
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(28415..28642)
----------------- DNA (228bp) protein (76aa) |
(db=HMMPfam db_id=PF04023 from=1 to=71 evalue=2.2e-11 interpro_id=IPR007167 interpro_description=Ferrous iron transporter, FeoA subunit GO=Molecular Function: iron ion binding (GO:0005506))
no description (db=HMMSmart db_id=SM00899 from=1 to=71 evalue=3.3e-11 interpro_id=IPR007167 interpro_description=Ferrous iron transporter, FeoA subunit GO=Molecular Function: iron ion binding (GO:0005506))
C-terminal domain of transcriptional repressors (db=superfamily db_id=SSF50037 from=27 to=71 evalue=2.8e-07 interpro_id=IPR008988 interpro_description=Transcriptional repressor, C-terminal)
Uncharacterized protein n=2 Tax=Sulfobacillus acidophilus RepID=F8IBN8_SULAT
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AMDSBA1_18_25
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(28658..29410)
----------------- DNA (753bp) protein (251aa) |
Sec-independent protein translocase TatC
Sec-independent protein translocase protein TatC 3 n=1 Tax=Sporosarcina newyorkensis 2681 RepID=F9DTP2_9BACL (db=UNIREF evalue=8.0e-36 bit_score=156.4 identity=32.6 coverage=92.03187250996015)
transmembrane_regions (db=TMHMM db_id=tmhmm from=191 to=213)
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=178)
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AMDSBA1_18_26
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(29435..30088)
----------------- DNA (654bp) protein (218aa) |
Response regulator, NarL-family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JV68_9GAMM (db=UNIREF evalue=1.4e-20 bit_score=105.5 identity=30.8 coverage=95.41284403669725)
HTH_LUXR_1 (db=PatternScan db_id=PS00622 from=166 to=193 evalue=0.0 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
CheY-like (db=superfamily db_id=SSF52172 from=2 to=186 evalue=9.3e-35 interpro_id=IPR011006 interpro_description=CheY-like superfamily)
no description (db=HMMSmart db_id=SM00448 from=5 to=118 evalue=8.8e-32 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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AMDSBA1_18_27
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(30054..30965)
----------------- DNA (912bp) protein (304aa) |
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SB28_9BACL (db=UNIREF evalue=2.0e-25 bit_score=122.1 identity=28.4 coverage=87.82894736842105)
coiled-coil (db=Coil db_id=coil from=121 to=142 evalue=NA)
coiled-coil (db=Coil db_id=coil from=67 to=88 evalue=NA)
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AMDSBA1_18_28
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(31092..31865)
----------------- DNA (774bp) protein (258aa) |
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=7 to=248 evalue=2.5e-37)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=7 to=249 evalue=1.6e-34)
ALPHA/BETA HYDROLASE RELATED (db=HMMPanther db_id=PTHR10992 from=7 to=242 evalue=7.8e-31)
VALACYCLOVIR HYDROLASE (db=HMMPanther db_id=PTHR10992:SF17 from=7 to=242 evalue=7.8e-31)
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AMDSBA1_18_29
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(31890..32579)
----------------- DNA (690bp) protein (230aa) |
molybdenum cofactor cytidylyltransferase
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z424_9GAMM (db=UNIREF evalue=5.5e-07 bit_score=60.5 identity=27.7 coverage=81.30434782608695)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=28 to=228 evalue=5.1e-19)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=30 to=220 evalue=1.6e-16)
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AMDSBA1_18_30
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(32612..33058)
----------------- DNA (447bp) protein (149aa) |
carbon monoxide dehydrogenase subunit G
Carbon-monoxide dehydrogenase subunit G n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SQ20_9BACT (db=UNIREF evalue=7.7e-18 bit_score=95.9 identity=31.2 coverage=93.28859060402685)
(db=HMMPfam db_id=PF06240 from=9 to=143 evalue=6.5e-22 interpro_id=IPR010419 interpro_description=Carbon monoxide dehydrogenase subunit G)
Bet v1-like (db=superfamily db_id=SSF55961 from=1 to=147 evalue=6.2e-11)
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