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AMDSBA1_22_8

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 4866..5759

Top 3 Functional Annotations

Value Algorithm Source
Urease accessory protein UreD n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=URED_NATPD (db=UNIREF evalue=8.4e-08 bit_score=63.5 identity=34.3 coverage=35.90604026845637) similarity UNIREF
DB: UNIREF
  • Identity: 34.3
  • Coverage: 35.91
  • Bit_score: 63
  • Evalue 8.40e-08
(db=HMMPfam db_id=PF01774 from=40 to=261 evalue=5.8e-34 interpro_id=IPR002669 interpro_description=Urease accessory protein UreD GO=Biological Process: nitrogen compound metabolic process (GO:0006807), Molecular Function: nickel ion binding (GO:0016151)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.80e-34
UreD (db=HAMAP db_id=MF_01384 from=2 to=271 evalue=16.83 interpro_id=IPR002669 interpro_description=Urease accessory protein UreD GO=Biological Process: nitrogen compound metabolic process (GO:0006807), Molecular Function: nickel ion binding (GO:0016151)) iprscan interpro
DB: HAMAP
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.68e+01

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Taxonomy

Helicobacter heilmannii → Helicobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGAAAAAACAACGTATTCGTGTCTACCCGAACCGCATCGAAACCTATTTTGAGCCTCCCCTTCAGCTCTTTGTGCTCAAAGAGACACCGCCTTTTCACGTGATGAGCGCGGAATTCGCGGGGGTCTTGGAAGGTGATCGGTTTGAAACCGAAATCATTGTGGAACCGGGAGCGTACGTCTTGTTGAGTACCCGGGAGGCCAGCAAGCTCATGTCTATGCCCGCTCAAGGTGCGCGGCATGACTGGCGAATTGTTTTGCGGGCCAATGCACAATTGGTCTCTTTGCCGCATGAAATCATTCCGTTTGCGCAAAGTGATTTTACCCAGAGTGTGCACTGTGAACTGGAGCCGGGTGCCTCGCTGGTTTGGGGAGAGGTGGTGATTGCAGGACGTCTGGCTCGGCATGAATATTTTCAGTTTCGGCACTTTCACAGCCGGCTGACCATCACCCCAACCGATTCATCTATCCCTCTATATCACGACAATCTGTGTTTGAAGCCCGGGCAGAGCGGATTAAGGCACGGGGAGGATAACTGGGGTAGCTTTGGGGCTTGGGGGTCATTGGTTGCGATACGCAATGATGCCACACGTGATGGCTTTACCTCGCCACCTTTGGAATATGCCCTAGACATCCGTTCTCGTCCCTATTCCTTTGAGGGCAAAAAGGAAGGCGAACAACAACTGGCCGGGAATCCGGTTCGCCGGCAATACCAGGGTCTGTCTGCTCTTCAGGGGGGATTTATTTGGCGGATGATGGCCGACCAACCGGAAGACATTCATGATAGGATGCGGGAAAGGGCGAAGGATGCGGAAAGTCAGAAATTCCCGGCACCCGAGACTTTCCCTGCACCGAAGGCCCGTGAAAAACTCTCGGTATCGGCGGCTTTCGGTTAG
PROTEIN sequence
Length: 298
MKKQRIRVYPNRIETYFEPPLQLFVLKETPPFHVMSAEFAGVLEGDRFETEIIVEPGAYVLLSTREASKLMSMPAQGARHDWRIVLRANAQLVSLPHEIIPFAQSDFTQSVHCELEPGASLVWGEVVIAGRLARHEYFQFRHFHSRLTITPTDSSIPLYHDNLCLKPGQSGLRHGEDNWGSFGAWGSLVAIRNDATRDGFTSPPLEYALDIRSRPYSFEGKKEGEQQLAGNPVRRQYQGLSALQGGFIWRMMADQPEDIHDRMRERAKDAESQKFPAPETFPAPKAREKLSVSAAFG*