ggKbase home page

AMDSBA1_30_13

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: 14138..14470

Top 3 Functional Annotations

Value Algorithm Source
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=3 to=92 evalue=5.3e-07 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: reg iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.30e-07
(db=HMMPfam db_id=PF00486 from=22 to=92 evalue=0.00011 interpro_id=IPR001867 interpro_description=Signal transduction response regulator, C-terminal GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.10e-04
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=92 evalue=0.00014 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.40e-04

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sequences

DNA sequence
Length: 333
TTGCGTGAGCGGATTATCGTTGAGTCCGACCAACAAGAGATATGGCGTGCCCATGACTTTGCGCCGTTGCCGACAAGGAACTGCGGCATATTGGCGTGCTTTTTAGAACGTCCGCATGACATTCTTCGCTCTTTCCTCTTACACGTGGGGTGGCCTGATGATATTCGGACAACTGCCGACCGCTTTCCCCAGATGCATCGCATCCGTCAAGCCATTGACCCGGATCCCCGTCGCCCTCAGCTCCTCGTGACGCGGTGGGAGGCGGGCTATCTCTTACCGGTGACTCCGGTGGCCGTGGAATTCGGTCCCATTTCCCCCATACGTCTTTCGTGA
PROTEIN sequence
Length: 111
LRERIIVESDQQEIWRAHDFAPLPTRNCGILACFLERPHDILRSFLLHVGWPDDIRTTADRFPQMHRIRQAIDPDPRRPQLLVTRWEAGYLLPVTPVAVEFGPISPIRLS*