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AMDSBA1_31_4

Organism: S._benefaciens_IM1

near complete RP 52 / 55 MC: 14 BSCG 51 / 51 ASCG 0 / 38
Location: comp(1505..2038)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated exonuclease, Cas4 family similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 165.0
  • Bit_score: 217
  • Evalue 4.30e-54
CRISPR-associated protein Cas4 n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R680_9THEO (db=UNIREF evalue=4.8e-35 bit_score=153.3 identity=40.3 coverage=88.76404494382022) similarity UNIREF
DB: UNIREF
  • Identity: 40.3
  • Coverage: 88.76
  • Bit_score: 153
  • Evalue 4.80e-35
(db=HMMPfam db_id=PF01930 from=19 to=177 evalue=2.3e-47 interpro_id=IPR022765 interpro_description=Dna2/Cas4, domain of unknown function DUF83) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.30e-47

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Taxonomy

Sulfobacillus acidophilus → Sulfobacillus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 534
GTGAAAGAAGATGACGATGACTCGGTGTCCCTTGCTCCCCTGCCTCACATTGGCGGAACATATATATGGTACTACATGATTTGCCGACGAGAATTATGGCTTATGGCCCACGCCGTGAATCCGGACGAAGATGATCCTAATATCGAGTACGGGAGATTTCTCCACGAGCGTGCTTACGCAAGGGAAGGGCACGAAGTCGCAGTCGATAGCAGCAAAATGGATCGCGTTATCGAACGGGACGGTGAGGTAATTGTGGTGGAGATTAAAAAGAGCAGCCGGGCCATTGATAGTGCCCGAACGCAGCTCGCCTATTATCTTTTCGAACTGGAACAGCGTGGGATTCATGCGAAGGGCGAACTGCGATTCCCCGAGGAGAAACGGAAGGATGTTGTGGCTTTGGACGATGATTGGCGCAAACGACTGTTGGAGATTCAAGAAGACATCAATGACTTGGTCGCTTTGCCTGTGCCTCCTCCGGCCACGCGTGTATCGTGGTGTGCGCACTGTGGTTATGCCGAATTCTGCTGGAGTTGA
PROTEIN sequence
Length: 178
VKEDDDDSVSLAPLPHIGGTYIWYYMICRRELWLMAHAVNPDEDDPNIEYGRFLHERAYAREGHEVAVDSSKMDRVIERDGEVIVVEIKKSSRAIDSARTQLAYYLFELEQRGIHAKGELRFPEEKRKDVVALDDDWRKRLLEIQEDINDLVALPVPPPATRVSWCAHCGYAEFCWS*